RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 KIF13AQ9H1H9 1805 aa12.29□□□□□ -0.44
FNDC3A-201ENST00000378383 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
FNDC3A-201ENST00000378383 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
FNDC3A-201ENST00000378383 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
FNDC3A-201ENST00000378383 C22orf23Q9BZE7 217 aa12.28□□□□□ -0.44
FNDC3A-201ENST00000378383 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
FNDC3A-201ENST00000378383 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.44
FNDC3A-201ENST00000378383 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
FNDC3A-201ENST00000378383 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.44
FNDC3A-201ENST00000378383 IFT57Q9NWB7 429 aa12.27□□□□□ -0.44
FNDC3A-201ENST00000378383 HSP90B1P14625 803 aaKnown RBP12.26□□□□□ -0.45
FNDC3A-201ENST00000378383 GNAI1P63096 354 aa12.26□□□□□ -0.45
FNDC3A-201ENST00000378383 GCC1Q96CN9 775 aa12.26□□□□□ -0.45
FNDC3A-201ENST00000378383 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 ZBTB7BO15156 539 aaPredicted RBP12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 VAMP4O75379 141 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 TECPR2O15040 1411 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 ABCB7O75027 752 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 IL13P35225 146 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 SNX21Q969T3 373 aa12.25□□□□□ -0.45
FNDC3A-201ENST00000378383 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
FNDC3A-201ENST00000378383 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
FNDC3A-201ENST00000378383 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
FNDC3A-201ENST00000378383 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
FNDC3A-201ENST00000378383 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 CAPN15O75808 1086 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 CHD1LQ86WJ1 897 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 ABCC4O15439 1325 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 KNDC1Q76NI1 1749 aa12.23□□□□□ -0.45
FNDC3A-201ENST00000378383 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
FNDC3A-201ENST00000378383 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
FNDC3A-201ENST00000378383 DDIT3P35638 169 aa12.21□□□□□ -0.45
FNDC3A-201ENST00000378383 L1TD1Q5T7N2 865 aaKnown RBP12.21□□□□□ -0.45
FNDC3A-201ENST00000378383 RETREG2Q8NC44 543 aa12.21□□□□□ -0.45
FNDC3A-201ENST00000378383 MON2Q7Z3U7 1717 aa12.21□□□□□ -0.45
FNDC3A-201ENST00000378383 MCM4P33991 863 aa12.21□□□□□ -0.46
FNDC3A-201ENST00000378383 WAPLQ7Z5K2 1190 aa12.21□□□□□ -0.46
FNDC3A-201ENST00000378383 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
FNDC3A-201ENST00000378383 FAM69CQ0P6D2 419 aa12.2□□□□□ -0.46
FNDC3A-201ENST00000378383 IRF5Q13568 498 aa12.2□□□□□ -0.46
FNDC3A-201ENST00000378383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.46
FNDC3A-201ENST00000378383 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
FNDC3A-201ENST00000378383 HDGFP51858 240 aaKnown RBP12.19□□□□□ -0.46
FNDC3A-201ENST00000378383 API5Q9BZZ5 524 aaKnown RBP12.19□□□□□ -0.46
FNDC3A-201ENST00000378383 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
FNDC3A-201ENST00000378383 C3P01024 1663 aa12.19□□□□□ -0.46
FNDC3A-201ENST00000378383 CPS1P31327 1500 aa12.19□□□□□ -0.46
FNDC3A-201ENST00000378383 AKAP12Q02952 1782 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 HSCBQ8IWL3 235 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 FAM43AQ8N2R8 423 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 COG3Q96JB2 828 aa12.18□□□□□ -0.46
FNDC3A-201ENST00000378383 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 PYGBP11216 843 aa12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 TWISTNBQ3B726 338 aaPredicted RBP12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 METP08581 1390 aa12.17□□□□□ -0.46
FNDC3A-201ENST00000378383 DLG5Q8TDM6 1919 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 PPP1R37O75864 691 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 HMOX1P09601 288 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 ISY1Q9ULR0 285 aaKnown RBP12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 NME9Q86XW9 330 aa12.16□□□□□ -0.46
FNDC3A-201ENST00000378383 DDX11L8A8MPP1 907 aa12.15□□□□□ -0.46
FNDC3A-201ENST00000378383 FBLN1P23142 703 aa12.15□□□□□ -0.46
FNDC3A-201ENST00000378383 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
FNDC3A-201ENST00000378383 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
FNDC3A-201ENST00000378383 ANKRD45Q5TZF3 282 aa12.15□□□□□ -0.47
FNDC3A-201ENST00000378383 KIF2CQ99661 725 aa12.15□□□□□ -0.47
FNDC3A-201ENST00000378383 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.47
FNDC3A-201ENST00000378383 PTMSP20962 102 aa12.14□□□□□ -0.47
FNDC3A-201ENST00000378383 C8orf58Q8NAV2 365 aa12.14□□□□□ -0.47
FNDC3A-201ENST00000378383 DCTPP1Q9H773 170 aa12.14□□□□□ -0.47
FNDC3A-201ENST00000378383 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
FNDC3A-201ENST00000378383 THUMPD2Q9BTF0 503 aaKnown RBP12.13□□□□□ -0.47
FNDC3A-201ENST00000378383 ITSN1Q15811 1721 aa12.13□□□□□ -0.47
FNDC3A-201ENST00000378383 CHL1O00533 1208 aa12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 CLEC17AQ6ZS10 378 aa12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 RPAP2Q8IXW5 612 aaPredicted RBP12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 OVOS2A0A0J9YW53 1432 aa12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 OVOS2Q6IE36 1432 aa12.12□□□□□ -0.47
FNDC3A-201ENST00000378383 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
FNDC3A-201ENST00000378383 GOLGA6L3A6NEY3 463 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms