RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
PCDH8-202ENST00000377942 IFNL2Q8IZJ0 200 aa23.52■■□□□ 1.36
PCDH8-202ENST00000377942 CTNNA3Q9UI47 895 aa23.52■■□□□ 1.36
PCDH8-202ENST00000377942 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
PCDH8-202ENST00000377942 EXOC5O00471 708 aa23.52■■□□□ 1.35
PCDH8-202ENST00000377942 IPO7O95373 1038 aaKnown RBP23.52■■□□□ 1.35
PCDH8-202ENST00000377942 TEX13AQ9BXU3 409 aaPredicted RBP23.51■■□□□ 1.35
PCDH8-202ENST00000377942 CWC22Q9HCG8 908 aaKnown RBP23.51■■□□□ 1.35
PCDH8-202ENST00000377942 FOSBP53539 338 aa23.51■■□□□ 1.35
PCDH8-202ENST00000377942 MPRIPQ6WCQ1 1025 aa23.51■■□□□ 1.35
PCDH8-202ENST00000377942 PTPRCP08575 1304 aa23.5■■□□□ 1.35
PCDH8-202ENST00000377942 AKAP2Q9Y2D5 859 aa23.5■■□□□ 1.35
PCDH8-202ENST00000377942 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
PCDH8-202ENST00000377942 RRP12Q5JTH9 1297 aaKnown RBP23.49■■□□□ 1.35
PCDH8-202ENST00000377942 NPHP3Q7Z494 1330 aa23.49■■□□□ 1.35
PCDH8-202ENST00000377942 MBD3O95983 291 aa23.49■■□□□ 1.35
PCDH8-202ENST00000377942 DISP1Q96F81 1524 aa23.49■■□□□ 1.35
PCDH8-202ENST00000377942 DCAF8L1A6NGE4 600 aa23.49■■□□□ 1.35
PCDH8-202ENST00000377942 IKQ13123 557 aaPredicted RBP23.49■■□□□ 1.35
PCDH8-202ENST00000377942 DNAAF4Q8WXU2 420 aa23.49■■□□□ 1.35
PCDH8-202ENST00000377942 ADAMTS2O95450 1211 aa23.48■■□□□ 1.35
PCDH8-202ENST00000377942 FKBP4Q02790 459 aaKnown RBP eCLIP23.48■■□□□ 1.35
PCDH8-202ENST00000377942 KRT32Q14532 448 aa23.48■■□□□ 1.35
PCDH8-202ENST00000377942 IL1RAPL2Q9NP60 686 aa23.48■■□□□ 1.35
PCDH8-202ENST00000377942 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
PCDH8-202ENST00000377942 PCMTD1Q96MG8 357 aaPredicted RBP23.47■■□□□ 1.35
PCDH8-202ENST00000377942 GLRX3O76003 335 aaKnown RBP23.47■■□□□ 1.35
PCDH8-202ENST00000377942 NGLY1Q96IV0 654 aa23.47■■□□□ 1.35
PCDH8-202ENST00000377942 ZNF396Q96N95 335 aaPredicted RBP23.47■■□□□ 1.35
PCDH8-202ENST00000377942 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
PCDH8-202ENST00000377942 ANKRD24Q8TF21 1146 aa23.46■■□□□ 1.35
PCDH8-202ENST00000377942 SDF4Q9BRK5 362 aa23.46■■□□□ 1.35
PCDH8-202ENST00000377942 NAT10Q9H0A0 1025 aaKnown RBP23.46■■□□□ 1.35
PCDH8-202ENST00000377942 ZPR1O75312 459 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 NCBP3Q53F19 620 aaKnown RBP23.45■■□□□ 1.34
PCDH8-202ENST00000377942 LETM1O95202 739 aaPredicted RBP23.45■■□□□ 1.34
PCDH8-202ENST00000377942 SAMD1Q6SPF0 538 aaPredicted RBP23.45■■□□□ 1.34
PCDH8-202ENST00000377942 TRIM22Q8IYM9 498 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 MAPKBP1O60336 1514 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 ASXL1Q8IXJ9 1541 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 MYD88Q99836 296 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 PPIP5K1Q6PFW1 1433 aa23.45■■□□□ 1.34
PCDH8-202ENST00000377942 BLOC1S2Q6QNY1 142 aa23.44■■□□□ 1.34
PCDH8-202ENST00000377942 EXOC6BQ9Y2D4 811 aa23.44■■□□□ 1.34
PCDH8-202ENST00000377942 METTL24Q5JXM2 366 aa23.43■■□□□ 1.34
PCDH8-202ENST00000377942 ZSCAN31Q96LW9 406 aaPredicted RBP23.43■■□□□ 1.34
PCDH8-202ENST00000377942 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
PCDH8-202ENST00000377942 OLFM4Q6UX06 510 aa23.43■■□□□ 1.34
PCDH8-202ENST00000377942 PDIA4P13667 645 aaKnown RBP23.42■■□□□ 1.34
PCDH8-202ENST00000377942 BICDL1Q6ZP65 573 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 ZMYM3Q14202 1370 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 FLIIQ13045 1269 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 NFKBIBQ15653 356 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 AMER1Q5JTC6 1135 aaPredicted RBP23.42■■□□□ 1.34
PCDH8-202ENST00000377942 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
PCDH8-202ENST00000377942 IFIT1P09914 478 aaKnown RBP23.41■■□□□ 1.34
PCDH8-202ENST00000377942 MX1P20591 662 aa23.41■■□□□ 1.34
PCDH8-202ENST00000377942 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
PCDH8-202ENST00000377942 K7ELQ4 463 aaPredicted RBP23.41■■□□□ 1.34
PCDH8-202ENST00000377942 RAI14Q9P0K7 980 aa23.41■■□□□ 1.34
PCDH8-202ENST00000377942 LRP2BPQ9P2M1 347 aa23.41■■□□□ 1.34
PCDH8-202ENST00000377942 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
PCDH8-202ENST00000377942 CCDC69A6NI79 296 aa23.4■■□□□ 1.34
PCDH8-202ENST00000377942 GOLGA6L1Q8N7Z2 621 aa23.4■■□□□ 1.34
PCDH8-202ENST00000377942 KINO60870 393 aaKnown RBP23.39■■□□□ 1.34
PCDH8-202ENST00000377942 TXLNAP40222 546 aa23.39■■□□□ 1.34
PCDH8-202ENST00000377942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.39■■□□□ 1.34
PCDH8-202ENST00000377942 TBX22Q9Y458 520 aa23.39■■□□□ 1.34
PCDH8-202ENST00000377942 CDKL5O76039 1030 aa23.39■■□□□ 1.33
PCDH8-202ENST00000377942 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.33
PCDH8-202ENST00000377942 CWC27Q6UX04 472 aaKnown RBP23.39■■□□□ 1.33
PCDH8-202ENST00000377942 WDR33Q9C0J8 1336 aaKnown RBP23.39■■□□□ 1.33
PCDH8-202ENST00000377942 TDO2P48775 406 aa23.38■■□□□ 1.33
PCDH8-202ENST00000377942 C19orf44Q9H6X5 657 aa23.38■■□□□ 1.33
PCDH8-202ENST00000377942 PPP1R1BQ9UD71 204 aaPredicted RBP23.38■■□□□ 1.33
PCDH8-202ENST00000377942 STK38Q15208 465 aa23.38■■□□□ 1.33
PCDH8-202ENST00000377942 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
PCDH8-202ENST00000377942 TOM1O60784 492 aa23.37■■□□□ 1.33
PCDH8-202ENST00000377942 CCDC70Q6NSX1 233 aa23.37■■□□□ 1.33
PCDH8-202ENST00000377942 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
PCDH8-202ENST00000377942 NUTM1Q86Y26 1132 aa23.37■■□□□ 1.33
PCDH8-202ENST00000377942 MBIPQ9NS73 344 aa23.37■■□□□ 1.33
PCDH8-202ENST00000377942 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
PCDH8-202ENST00000377942 IDH1O75874 414 aaKnown RBP23.36■■□□□ 1.33
PCDH8-202ENST00000377942 SNRPA1P09661 255 aaKnown RBP23.36■■□□□ 1.33
PCDH8-202ENST00000377942 CAVIN4Q5BKX8 364 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
PCDH8-202ENST00000377942 ATP10AO60312 1499 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 TRIM27P14373 513 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 F6X3S4 739 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 HSP90AB2PQ58FF8 381 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 PDRG1Q9NUG6 133 aa23.36■■□□□ 1.33
PCDH8-202ENST00000377942 AIDAQ96BJ3 306 aa23.35■■□□□ 1.33
PCDH8-202ENST00000377942 ADGRL2O95490 1459 aa23.35■■□□□ 1.33
PCDH8-202ENST00000377942 UBAC1Q9BSL1 405 aa23.35■■□□□ 1.33
PCDH8-202ENST00000377942 ARHGAP45Q92619 1136 aa23.35■■□□□ 1.33
PCDH8-202ENST00000377942 POLR3AO14802 1390 aaPredicted RBP23.34■■□□□ 1.33
PCDH8-202ENST00000377942 A0A087WZG4 1122 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms