RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 TOM1L2Q6ZVM7 507 aa27.44■■□□□ 1.98
RNF38-205ENST00000377877 RCAN3Q9UKA8 241 aa27.44■■□□□ 1.98
RNF38-205ENST00000377877 HSPA1LP34931 641 aa27.43■■□□□ 1.98
RNF38-205ENST00000377877 LAS1LQ9Y4W2 734 aaKnown RBP27.42■■□□□ 1.98
RNF38-205ENST00000377877 PLEKHO1Q53GL0 409 aaPredicted RBP27.42■■□□□ 1.98
RNF38-205ENST00000377877 MYH16Q9H6N6 1097 aa27.42■■□□□ 1.98
RNF38-205ENST00000377877 COL14A1Q05707 1796 aaKnown RBP27.41■■□□□ 1.98
RNF38-205ENST00000377877 JCADQ9P266 1359 aa27.4■■□□□ 1.98
RNF38-205ENST00000377877 GNAT3A8MTJ3 354 aa27.4■■□□□ 1.98
RNF38-205ENST00000377877 RAPGEF4Q8WZA2 1011 aa27.4■■□□□ 1.98
RNF38-205ENST00000377877 FANCIQ9NVI1 1328 aa27.4■■□□□ 1.98
RNF38-205ENST00000377877 ZNF853P0CG23 659 aa27.39■■□□□ 1.98
RNF38-205ENST00000377877 AMOTQ4VCS5 1084 aa27.39■■□□□ 1.97
RNF38-205ENST00000377877 IL17REQ8NFR9 667 aa27.39■■□□□ 1.97
RNF38-205ENST00000377877 RTF1Q92541 710 aaKnown RBP27.39■■□□□ 1.97
RNF38-205ENST00000377877 CARD10Q9BWT7 1032 aa27.39■■□□□ 1.97
RNF38-205ENST00000377877 MEGF6O75095 1541 aa27.38■■□□□ 1.97
RNF38-205ENST00000377877 TATP17735 454 aaPredicted RBP27.38■■□□□ 1.97
RNF38-205ENST00000377877 ZNF530Q6P9A1 599 aaPredicted RBP27.38■■□□□ 1.97
RNF38-205ENST00000377877 CALD1Q05682 793 aaKnown RBP27.37■■□□□ 1.97
RNF38-205ENST00000377877 HTATSF1O43719 755 aaKnown RBP27.37■■□□□ 1.97
RNF38-205ENST00000377877 MAP3K5Q99683 1374 aa27.36■■□□□ 1.97
RNF38-205ENST00000377877 IFT57Q9NWB7 429 aa27.36■■□□□ 1.97
RNF38-205ENST00000377877 CFAP44Q96MT7 982 aa27.35■■□□□ 1.97
RNF38-205ENST00000377877 GNAI1P63096 354 aa27.35■■□□□ 1.97
RNF38-205ENST00000377877 EXOSC9Q06265 439 aaKnown RBP27.35■■□□□ 1.97
RNF38-205ENST00000377877 LGR6Q9HBX8 967 aa27.35■■□□□ 1.97
RNF38-205ENST00000377877 USP35Q9P2H5 1018 aa27.35■■□□□ 1.97
RNF38-205ENST00000377877 CRB1P82279 1406 aa27.34■■□□□ 1.97
RNF38-205ENST00000377877 MBIPQ9NS73 344 aa27.34■■□□□ 1.97
RNF38-205ENST00000377877 RNF123Q5XPI4 1314 aa27.34■■□□□ 1.97
RNF38-205ENST00000377877 IRX6P78412 446 aaPredicted RBP27.33■■□□□ 1.97
RNF38-205ENST00000377877 AKAP4Q5JQC9 854 aa27.33■■□□□ 1.97
RNF38-205ENST00000377877 MIS18AQ9NYP9 233 aa27.32■■□□□ 1.96
RNF38-205ENST00000377877 MPRIPQ6WCQ1 1025 aa27.31■■□□□ 1.96
RNF38-205ENST00000377877 CHL1O00533 1208 aa27.31■■□□□ 1.96
RNF38-205ENST00000377877 PLCH1Q4KWH8 1693 aa27.31■■□□□ 1.96
RNF38-205ENST00000377877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.3■■□□□ 1.96
RNF38-205ENST00000377877 C1orf141Q5JVX7 400 aa27.29■■□□□ 1.96
RNF38-205ENST00000377877 SPG7Q9UQ90 795 aa27.29■■□□□ 1.96
RNF38-205ENST00000377877 IL2RBP14784 551 aa27.28■■□□□ 1.96
RNF38-205ENST00000377877 SPATA31A6Q5VVP1 1343 aa27.27■■□□□ 1.96
RNF38-205ENST00000377877 CYP27B1O15528 508 aa27.27■■□□□ 1.96
RNF38-205ENST00000377877 BCAR3O75815 825 aa27.27■■□□□ 1.96
RNF38-205ENST00000377877 OVOS2A0A0G2JMS6 1433 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 C8orf37Q96NL8 207 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 CEMIPQ8WUJ3 1361 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 LRP6O75581 1613 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 RNMTO43148 476 aaKnown RBP27.26■■□□□ 1.95
RNF38-205ENST00000377877 PLIN1O60240 522 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 PHKG2P15735 406 aa27.26■■□□□ 1.95
RNF38-205ENST00000377877 SLIT2O94813 1529 aa27.25■■□□□ 1.95
RNF38-205ENST00000377877 RRP1P56182 461 aaKnown RBP27.25■■□□□ 1.95
RNF38-205ENST00000377877 NGLY1Q96IV0 654 aa27.25■■□□□ 1.95
RNF38-205ENST00000377877 TSPYL6Q8N831 410 aa27.24■■□□□ 1.95
RNF38-205ENST00000377877 ZCRB1Q8TBF4 217 aaKnown RBP27.24■■□□□ 1.95
RNF38-205ENST00000377877 RARSP54136 660 aaKnown RBP27.24■■□□□ 1.95
RNF38-205ENST00000377877 C8orf58Q8NAV2 365 aa27.24■■□□□ 1.95
RNF38-205ENST00000377877 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
RNF38-205ENST00000377877 PKD1L3Q7Z443 1732 aa27.23■■□□□ 1.95
RNF38-205ENST00000377877 LRRC37A3O60309 1634 aa27.23■■□□□ 1.95
RNF38-205ENST00000377877 ELL2O00472 640 aaPredicted RBP27.23■■□□□ 1.95
RNF38-205ENST00000377877 TAF7Q15545 349 aaPredicted RBP27.23■■□□□ 1.95
RNF38-205ENST00000377877 IFNL2Q8IZJ0 200 aa27.23■■□□□ 1.95
RNF38-205ENST00000377877 KRT24Q2M2I5 525 aa27.22■■□□□ 1.95
RNF38-205ENST00000377877 TSPYL4Q9UJ04 414 aa27.22■■□□□ 1.95
RNF38-205ENST00000377877 VIRMAQ69YN4 1812 aaKnown RBP27.21■■□□□ 1.95
RNF38-205ENST00000377877 PLEKHG2Q9H7P9 1386 aa27.21■■□□□ 1.95
RNF38-205ENST00000377877 PARP4Q9UKK3 1724 aaKnown RBP27.21■■□□□ 1.95
RNF38-205ENST00000377877 VAMP4O75379 141 aa27.2■■□□□ 1.94
RNF38-205ENST00000377877 SPATA31A1Q5TZJ5 1347 aa27.2■■□□□ 1.94
RNF38-205ENST00000377877 NWD2Q9ULI1 1742 aa27.19■■□□□ 1.94
RNF38-205ENST00000377877 CT47B1P0C2W7 299 aaPredicted RBP27.19■■□□□ 1.94
RNF38-205ENST00000377877 BCL2L13Q9BXK5 485 aa27.19■■□□□ 1.94
RNF38-205ENST00000377877 UNC5CLQ8IV45 518 aa27.18■■□□□ 1.94
RNF38-205ENST00000377877 FNBP4Q8N3X1 1017 aaPredicted RBP27.18■■□□□ 1.94
RNF38-205ENST00000377877 KDM6AO15550 1401 aaPredicted RBP27.18■■□□□ 1.94
RNF38-205ENST00000377877 BCL9LQ86UU0 1499 aa27.18■■□□□ 1.94
RNF38-205ENST00000377877 TEFQ10587 303 aa27.17■■□□□ 1.94
RNF38-205ENST00000377877 DDX54Q8TDD1 881 aaKnown RBP27.17■■□□□ 1.94
RNF38-205ENST00000377877 SPATA31A5Q5VU36 1347 aa27.17■■□□□ 1.94
RNF38-205ENST00000377877 SPATA31A7Q8IWB4 1347 aa27.17■■□□□ 1.94
RNF38-205ENST00000377877 DISP2A7MBM2 1401 aa27.17■■□□□ 1.94
RNF38-205ENST00000377877 TWISTNBQ3B726 338 aaPredicted RBP27.16■■□□□ 1.94
RNF38-205ENST00000377877 ADAMTS7Q9UKP4 1686 aa27.16■■□□□ 1.94
RNF38-205ENST00000377877 SSH1Q8WYL5 1049 aa27.15■■□□□ 1.94
RNF38-205ENST00000377877 CCDC9Q9Y3X0 531 aaKnown RBP27.15■■□□□ 1.94
RNF38-205ENST00000377877 PCDH11XQ9BZA7 1347 aa27.15■■□□□ 1.94
RNF38-205ENST00000377877 PCDH11YQ9BZA8 1340 aa27.15■■□□□ 1.94
RNF38-205ENST00000377877 SHANK3Q9BYB0 1731 aa27.14■■□□□ 1.94
RNF38-205ENST00000377877 KCNQ3O43525 872 aa27.14■■□□□ 1.94
RNF38-205ENST00000377877 DCAF5Q96JK2 942 aa27.14■■□□□ 1.94
RNF38-205ENST00000377877 SCN11AQ9UI33 1791 aa27.14■■□□□ 1.93
RNF38-205ENST00000377877 C20orf194Q5TEA3 1177 aa27.13■■□□□ 1.93
RNF38-205ENST00000377877 BABAM1Q9NWV8 329 aa27.13■■□□□ 1.93
RNF38-205ENST00000377877 MEX3CQ5U5Q3 659 aaKnown RBP27.13■■□□□ 1.93
RNF38-205ENST00000377877 ERICH6BQ5W0A0 696 aa27.12■■□□□ 1.93
RNF38-205ENST00000377877 NFATC2IPQ8NCF5 419 aa27.12■■□□□ 1.93
RNF38-205ENST00000377877 BTBD11A6QL63 1104 aa27.11■■□□□ 1.93
RNF38-205ENST00000377877 USP21Q9UK80 565 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms