RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ANKRD20A12PQ8NF67 263 aa10.43□□□□□ -0.74
PCDH9-202ENST00000377865 RRAGDQ9NQL2 400 aaPredicted RBP10.43□□□□□ -0.74
PCDH9-202ENST00000377865 CCAR2Q8N163 923 aaKnown RBP10.43□□□□□ -0.74
PCDH9-202ENST00000377865 ZFYVE9O95405 1425 aa10.43□□□□□ -0.74
PCDH9-202ENST00000377865 TERF1P54274 439 aa10.43□□□□□ -0.74
PCDH9-202ENST00000377865 CGNQ9P2M7 1197 aaKnown RBP10.43□□□□□ -0.74
PCDH9-202ENST00000377865 LARP1BQ659C4 914 aaKnown RBP10.42□□□□□ -0.74
PCDH9-202ENST00000377865 SPATA32Q96LK8 384 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 CFAP45Q9UL16 551 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 ZKSCAN5Q9Y2L8 839 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 A0A0G2JS52 829 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 NUTM2FA1L443 756 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
PCDH9-202ENST00000377865 SDF4Q9BRK5 362 aa10.42□□□□□ -0.74
PCDH9-202ENST00000377865 KRT32Q14532 448 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 PLXNC1O60486 1568 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 ANAPC15P60006 121 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 TRDNQ13061 729 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
PCDH9-202ENST00000377865 NEMFO60524 1076 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 SMC2O95347 1197 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 RLBP1P12271 317 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
PCDH9-202ENST00000377865 CBFA2T2O43439 604 aa10.4□□□□□ -0.74
PCDH9-202ENST00000377865 AKAP17AQ02040 695 aaKnown RBP10.4□□□□□ -0.74
PCDH9-202ENST00000377865 MRPL50Q8N5N7 158 aaKnown RBP10.4□□□□□ -0.74
PCDH9-202ENST00000377865 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
PCDH9-202ENST00000377865 JAKMIP1Q96N16 626 aaKnown RBP10.4□□□□□ -0.74
PCDH9-202ENST00000377865 ZBTB40Q9NUA8 1239 aa10.4□□□□□ -0.74
PCDH9-202ENST00000377865 FANCAO15360 1455 aa10.4□□□□□ -0.74
PCDH9-202ENST00000377865 DHX16O60231 1041 aaKnown RBP10.4□□□□□ -0.74
PCDH9-202ENST00000377865 SMARCA5O60264 1052 aaPredicted RBP10.4□□□□□ -0.75
PCDH9-202ENST00000377865 UBE2HP62256 183 aa10.4□□□□□ -0.75
PCDH9-202ENST00000377865 BLOC1S2Q6QNY1 142 aa10.4□□□□□ -0.75
PCDH9-202ENST00000377865 KIF1BPQ96EK5 621 aa10.4□□□□□ -0.75
PCDH9-202ENST00000377865 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.75
PCDH9-202ENST00000377865 HDGFL1Q5TGJ6 251 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 LIMCH1Q9UPQ0 1083 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 CEP57L1Q8IYX8 460 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 CASTP20810 708 aaKnown RBP10.39□□□□□ -0.75
PCDH9-202ENST00000377865 HSP90B2PQ58FF3 399 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 ADCY5O95622 1261 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 SAFBQ15424 915 aaKnown RBP eCLIP10.39□□□□□ -0.75
PCDH9-202ENST00000377865 RIC3Q7Z5B4 369 aa10.39□□□□□ -0.75
PCDH9-202ENST00000377865 TRMT2AQ8IZ69 625 aaKnown RBP10.39□□□□□ -0.75
PCDH9-202ENST00000377865 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
PCDH9-202ENST00000377865 NOC3LQ8WTT2 800 aaKnown RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 BCORL1Q5H9F3 1711 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 AK7Q96M32 723 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 GLRX3O76003 335 aaKnown RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 DDX19AQ9NUU7 478 aaKnown RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 CTAGE5O15320 804 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 IPO7O95373 1038 aaKnown RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 CAVIN2O95810 425 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
PCDH9-202ENST00000377865 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 ANKRD44Q8N8A2 993 aa10.38□□□□□ -0.75
PCDH9-202ENST00000377865 TARBP1Q13395 1621 aaKnown RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 SMTNL1A8MU46 457 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 JMYQ8N9B5 988 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 TMX3Q96JJ7 454 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 CROCC2H7BZ55 1655 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 ZNF445P59923 1031 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 STK38Q15208 465 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 DACH1Q9UI36 760 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 TTC37Q6PGP7 1564 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 CWC27Q6UX04 472 aaKnown RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 CCDC47Q96A33 483 aaKnown RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 NOL7Q9UMY1 257 aaKnown RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 EXOC6BQ9Y2D4 811 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 FOSBP53539 338 aa10.37□□□□□ -0.75
PCDH9-202ENST00000377865 PLEKHO1Q53GL0 409 aaPredicted RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 THUMPD2Q9BTF0 503 aaKnown RBP10.37□□□□□ -0.75
PCDH9-202ENST00000377865 SRGAP3O43295 1099 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 MAP4K4O95819 1239 aaPredicted RBP10.36□□□□□ -0.75
PCDH9-202ENST00000377865 SDSP20132 328 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 PAXBP1Q9Y5B6 917 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 STX6O43752 255 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 TSPYL1Q9H0U9 437 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CARD14Q9BXL6 1004 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 TNNQ9UQP3 1299 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 TRPM1Q7Z4N2 1603 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CCDC83Q8IWF9 413 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 INTS4Q96HW7 963 aaKnown RBP10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CBX1P83916 185 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 RRS1Q15050 365 aaKnown RBP10.36□□□□□ -0.75
PCDH9-202ENST00000377865 LEKR1Q6ZMV7 388 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CCDC94Q9BW85 323 aaPredicted RBP10.36□□□□□ -0.75
PCDH9-202ENST00000377865 TTC21BQ7Z4L5 1316 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 ZNF521Q96K83 1311 aa10.36□□□□□ -0.75
PCDH9-202ENST00000377865 CLASP1Q7Z460 1538 aa10.35□□□□□ -0.75
PCDH9-202ENST00000377865 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms