RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 SCTRP47872 440 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 TRIM26Q12899 539 aaPredicted RBP7.32□□□□□ -1.24
CUBN-201ENST00000377823 NR5A1Q13285 461 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 TMEM164Q5U3C3 297 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 Q6ZNB5 142 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 CCDC116Q8IYX3 515 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 TMPRSS4Q9NRS4 437 aa7.32□□□□□ -1.24
CUBN-201ENST00000377823 ZBTB7BO15156 539 aaPredicted RBP7.31□□□□□ -1.24
CUBN-201ENST00000377823 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 ERVK-9P63128 1117 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 PSME1Q06323 249 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 DPYDQ12882 1025 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 KCTD17Q8N5Z5 321 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 TRIM52Q96A61 297 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 CYLDQ9NQC7 956 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 PKD2L1Q9P0L9 805 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 PCDHGA11Q9Y5H2 935 aa7.31□□□□□ -1.24
CUBN-201ENST00000377823 NR3C2P08235 984 aa7.3□□□□□ -1.24
CUBN-201ENST00000377823 PPP1R26Q5T8A7 1209 aaPredicted RBP7.3□□□□□ -1.24
CUBN-201ENST00000377823 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
CUBN-201ENST00000377823 CC2D2BQ6DHV5 1058 aa7.3□□□□□ -1.24
CUBN-201ENST00000377823 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
CUBN-201ENST00000377823 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
CUBN-201ENST00000377823 RBM19Q9Y4C8 960 aaKnown RBP7.3□□□□□ -1.24
CUBN-201ENST00000377823 ZBTB7CA1YPR0 619 aa7.29□□□□□ -1.24
CUBN-201ENST00000377823 SIX5Q8N196 739 aa7.29□□□□□ -1.24
CUBN-201ENST00000377823 ZNF784Q8NCA9 323 aaPredicted RBP7.29□□□□□ -1.24
CUBN-201ENST00000377823 SNIP1Q8TAD8 396 aaKnown RBP7.29□□□□□ -1.24
CUBN-201ENST00000377823 WASF2Q9Y6W5 498 aa7.29□□□□□ -1.24
CUBN-201ENST00000377823 DKK1O94907 266 aa7.28□□□□□ -1.24
CUBN-201ENST00000377823 MYT1Q01538 1121 aa7.28□□□□□ -1.24
CUBN-201ENST00000377823 PGPEP1Q9NXJ5 209 aa7.28□□□□□ -1.24
CUBN-201ENST00000377823 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
CUBN-201ENST00000377823 TNFRSF10AO00220 468 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 GDF9O60383 454 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 LILRA1O75019 489 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 BRD1O95696 1058 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 SEC13P55735 322 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 FAM69CQ0P6D2 419 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 NNTQ13423 1086 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 CYP4X1Q8N118 509 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 OSBPL3Q9H4L5 887 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 EMILIN1Q9Y6C2 1016 aa7.27□□□□□ -1.25
CUBN-201ENST00000377823 SFI1A8K8P3 1242 aa7.26□□□□□ -1.25
CUBN-201ENST00000377823 J3QL48 77 aa7.25□□□□□ -1.25
CUBN-201ENST00000377823 SWI5Q1ZZU3 235 aa7.25□□□□□ -1.25
CUBN-201ENST00000377823 ADD1P35611 737 aaKnown RBP7.24□□□□□ -1.25
CUBN-201ENST00000377823 B4GALNT3Q6L9W6 998 aa7.24□□□□□ -1.25
CUBN-201ENST00000377823 CYP2U1Q7Z449 544 aa7.24□□□□□ -1.25
CUBN-201ENST00000377823 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.24□□□□□ -1.25
CUBN-201ENST00000377823 CLP1Q92989 425 aaKnown RBP7.24□□□□□ -1.25
CUBN-201ENST00000377823 TOR4AQ9NXH8 423 aa7.24□□□□□ -1.25
CUBN-201ENST00000377823 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
CUBN-201ENST00000377823 PATL2C9JE40 543 aaKnown RBP7.23□□□□□ -1.25
CUBN-201ENST00000377823 STAU1O95793 577 aaKnown RBP7.23□□□□□ -1.25
CUBN-201ENST00000377823 LAPTM4AQ15012 233 aa7.23□□□□□ -1.25
CUBN-201ENST00000377823 TRIM67Q6ZTA4 783 aa7.23□□□□□ -1.25
CUBN-201ENST00000377823 HINFPQ9BQA5 517 aa7.23□□□□□ -1.25
CUBN-201ENST00000377823 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
CUBN-201ENST00000377823 SLAIN2Q9P270 581 aa7.23□□□□□ -1.25
CUBN-201ENST00000377823 TMEM229AB2RXF0 380 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 ZIC2O95409 532 aaPredicted RBP7.22□□□□□ -1.25
CUBN-201ENST00000377823 GNRH1P01148 92 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 SMPD1P17405 629 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 SCNN1DP51172 638 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 GDF10P55107 478 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 WDR4P57081 412 aaKnown RBP7.22□□□□□ -1.25
CUBN-201ENST00000377823 PRR20EP86478 221 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 PRR20CP86479 221 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 PRR20DP86480 221 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 PRR20BP86481 221 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 PRR20AP86496 221 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 KCNA1Q09470 495 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
CUBN-201ENST00000377823 ITPKCQ96DU7 683 aa7.22□□□□□ -1.25
CUBN-201ENST00000377823 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
CUBN-201ENST00000377823 M0R2N6 131 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 PRMT3O60678 531 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 LGR5O75473 907 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 ATP2B4P23634 1241 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 SSFA2P28290 1259 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 CBLBQ13191 982 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 PHLDB3Q6NSJ2 640 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 ZFAND3Q9H8U3 227 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 ETNK1Q9HBU6 452 aa7.21□□□□□ -1.26
CUBN-201ENST00000377823 WASLO00401 505 aaPredicted RBP7.2□□□□□ -1.26
CUBN-201ENST00000377823 BACH1O14867 736 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 INHAP05111 366 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 ADH1AP07327 375 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 ESCO1Q5FWF5 840 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 PRIMPOLQ96LW4 560 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 ARHGEF10LQ9HCE6 1279 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
CUBN-201ENST00000377823 TIMP2P16035 220 aa7.19□□□□□ -1.26
CUBN-201ENST00000377823 Q6ZVU0 165 aa7.19□□□□□ -1.26
CUBN-201ENST00000377823 TNS4Q8IZW8 715 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms