RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
SMARCE1-203ENST00000377808 RREB1Q92766 1687 aa15.81■□□□□ 0.12
SMARCE1-203ENST00000377808 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
SMARCE1-203ENST00000377808 NUP188Q5SRE5 1749 aa15.8■□□□□ 0.12
SMARCE1-203ENST00000377808 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
SMARCE1-203ENST00000377808 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
SMARCE1-203ENST00000377808 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
SMARCE1-203ENST00000377808 PLSCR1O15162 318 aa15.79■□□□□ 0.12
SMARCE1-203ENST00000377808 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-203ENST00000377808 CC2D1BQ5T0F9 858 aaKnown RBP15.77■□□□□ 0.12
SMARCE1-203ENST00000377808 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.11
SMARCE1-203ENST00000377808 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.11
SMARCE1-203ENST00000377808 EYA1Q99502 592 aa15.76■□□□□ 0.11
SMARCE1-203ENST00000377808 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
SMARCE1-203ENST00000377808 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
SMARCE1-203ENST00000377808 SHANK3Q9BYB0 1731 aa15.75■□□□□ 0.11
SMARCE1-203ENST00000377808 PRIM1P49642 420 aaKnown RBP15.75■□□□□ 0.11
SMARCE1-203ENST00000377808 TXNRD1Q16881 649 aa15.75■□□□□ 0.11
SMARCE1-203ENST00000377808 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
SMARCE1-203ENST00000377808 DOT1LQ8TEK3 1739 aa15.75■□□□□ 0.11
SMARCE1-203ENST00000377808 BTAF1O14981 1849 aa15.74■□□□□ 0.11
SMARCE1-203ENST00000377808 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
SMARCE1-203ENST00000377808 PROM2Q8N271 834 aa15.72■□□□□ 0.11
SMARCE1-203ENST00000377808 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-203ENST00000377808 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
SMARCE1-203ENST00000377808 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
SMARCE1-203ENST00000377808 MSH5O43196 834 aa15.71■□□□□ 0.11
SMARCE1-203ENST00000377808 PER1O15534 1290 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-203ENST00000377808 NCAPD2Q15021 1401 aa15.7■□□□□ 0.1
SMARCE1-203ENST00000377808 CYP27B1O15528 508 aa15.69■□□□□ 0.1
SMARCE1-203ENST00000377808 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
SMARCE1-203ENST00000377808 LRP5O75197 1615 aa15.69■□□□□ 0.1
SMARCE1-203ENST00000377808 IGSF1Q8N6C5 1336 aa15.69■□□□□ 0.1
SMARCE1-203ENST00000377808 MTHFSP49914 203 aa15.68■□□□□ 0.1
SMARCE1-203ENST00000377808 MPRIPQ6WCQ1 1025 aa15.68■□□□□ 0.1
SMARCE1-203ENST00000377808 KCNQ4P56696 695 aa15.67■□□□□ 0.1
SMARCE1-203ENST00000377808 SLC15A2Q16348 729 aa15.67■□□□□ 0.1
SMARCE1-203ENST00000377808 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
SMARCE1-203ENST00000377808 AEBP1Q8IUX7 1158 aa15.66■□□□□ 0.1
SMARCE1-203ENST00000377808 IFNL2Q8IZJ0 200 aa15.66■□□□□ 0.1
SMARCE1-203ENST00000377808 LRRC4BQ9NT99 713 aa15.66■□□□□ 0.1
SMARCE1-203ENST00000377808 PHKG2P15735 406 aa15.65■□□□□ 0.1
SMARCE1-203ENST00000377808 IL13P35225 146 aa15.65■□□□□ 0.1
SMARCE1-203ENST00000377808 PLEKHO1Q53GL0 409 aaPredicted RBP15.65■□□□□ 0.1
SMARCE1-203ENST00000377808 SLC27A3Q5K4L6 730 aa15.65■□□□□ 0.1
SMARCE1-203ENST00000377808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.65■□□□□ 0.13e-7■■■□□ 16.6
SMARCE1-203ENST00000377808 CCNL1Q9UK58 526 aaPredicted RBP15.65■□□□□ 0.1
SMARCE1-203ENST00000377808 ZBTB7AO95365 584 aa15.64■□□□□ 0.09
SMARCE1-203ENST00000377808 ZNF530Q6P9A1 599 aaPredicted RBP15.64■□□□□ 0.09
SMARCE1-203ENST00000377808 SPON1Q9HCB6 807 aa15.64■□□□□ 0.09
SMARCE1-203ENST00000377808 PPP1R1BQ9UD71 204 aaPredicted RBP15.64■□□□□ 0.09
SMARCE1-203ENST00000377808 TOGARAM1Q9Y4F4 1720 aa15.63■□□□□ 0.09
SMARCE1-203ENST00000377808 NPC1L1Q9UHC9 1359 aa15.63■□□□□ 0.09
SMARCE1-203ENST00000377808 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
SMARCE1-203ENST00000377808 PDGFDQ9GZP0 370 aaPredicted RBP15.63■□□□□ 0.09
SMARCE1-203ENST00000377808 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
SMARCE1-203ENST00000377808 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 PAPPAQ13219 1627 aa15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 HMOX1P09601 288 aa15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 NKX1-1Q15270 411 aaPredicted RBP15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 AMOTQ4VCS5 1084 aa15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 C1orf141Q5JVX7 400 aa15.62■□□□□ 0.09
SMARCE1-203ENST00000377808 PIGBQ92521 554 aa15.61■□□□□ 0.09
SMARCE1-203ENST00000377808 TFCP2L1Q9NZI6 479 aa15.61■□□□□ 0.09
SMARCE1-203ENST00000377808 ITGB4P16144 1822 aa15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 U2SURPO15042 1029 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 HSP90AB1P08238 724 aaKnown RBP15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 SMARCC1Q92922 1105 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 LY75O60449 1722 aa15.6■□□□□ 0.09
SMARCE1-203ENST00000377808 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
SMARCE1-203ENST00000377808 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
SMARCE1-203ENST00000377808 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
SMARCE1-203ENST00000377808 CFAP53Q96M91 514 aa15.58■□□□□ 0.08
SMARCE1-203ENST00000377808 KDRP35968 1356 aa15.57■□□□□ 0.08
SMARCE1-203ENST00000377808 DCAF5Q96JK2 942 aa15.57■□□□□ 0.08
SMARCE1-203ENST00000377808 CABP4P57796 275 aa15.56■□□□□ 0.08
SMARCE1-203ENST00000377808 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
SMARCE1-203ENST00000377808 ERVV-2B6SEH9 535 aa15.55■□□□□ 0.08
SMARCE1-203ENST00000377808 ASAP1Q9ULH1 1129 aa15.55■□□□□ 0.08
SMARCE1-203ENST00000377808 KDM6AO15550 1401 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-203ENST00000377808 COL3A1P02461 1466 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-203ENST00000377808 C5P01031 1676 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 LOC102724428A0A0B4J2F2 783 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 SIK1P57059 783 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 AK7Q96M32 723 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 PNPLA7Q6ZV29 1317 aa15.54■□□□□ 0.08
SMARCE1-203ENST00000377808 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
SMARCE1-203ENST00000377808 RBM42Q9BTD8 480 aaKnown RBP15.53■□□□□ 0.08
SMARCE1-203ENST00000377808 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
SMARCE1-203ENST00000377808 HMGB2P26583 209 aaKnown RBP15.52■□□□□ 0.08
SMARCE1-203ENST00000377808 ATP6V1AP38606 617 aa15.52■□□□□ 0.08
SMARCE1-203ENST00000377808 ATG3Q9NT62 314 aa15.52■□□□□ 0.08
SMARCE1-203ENST00000377808 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
SMARCE1-203ENST00000377808 PHF14O94880 888 aa15.51■□□□□ 0.07
SMARCE1-203ENST00000377808 PTGER2P43116 358 aa15.51■□□□□ 0.07
SMARCE1-203ENST00000377808 MTHFSDQ2M296 383 aaKnown RBP15.51■□□□□ 0.07
SMARCE1-203ENST00000377808 DDX10Q13206 875 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms