RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 TUBB4AP04350 444 aa19.59■□□□□ 0.73
ATXN2-201ENST00000377617 PAFAH1B1P43034 410 aa19.59■□□□□ 0.73
ATXN2-201ENST00000377617 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
ATXN2-201ENST00000377617 BAG4O95429 457 aaKnown RBP19.59■□□□□ 0.73
ATXN2-201ENST00000377617 STK3Q13188 491 aa19.59■□□□□ 0.73
ATXN2-201ENST00000377617 ARFGAP3Q9NP61 516 aa19.59■□□□□ 0.73
ATXN2-201ENST00000377617 TRMT1Q9NXH9 659 aaKnown RBP19.59■□□□□ 0.73
ATXN2-201ENST00000377617 GBP2P32456 591 aaPredicted RBP19.59■□□□□ 0.73
ATXN2-201ENST00000377617 CDKL5O76039 1030 aa19.58■□□□□ 0.73
ATXN2-201ENST00000377617 EIF5P55010 431 aaKnown RBP19.58■□□□□ 0.72
ATXN2-201ENST00000377617 CAMK4Q16566 473 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 JAKMIP1Q96N16 626 aaKnown RBP19.57■□□□□ 0.72
ATXN2-201ENST00000377617 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 WIZO95785 1651 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 SPECC1LQ69YQ0 1117 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 VPS37DQ86XT2 251 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 ZNF397Q8NF99 534 aaPredicted RBP19.57■□□□□ 0.72
ATXN2-201ENST00000377617 SPA17Q15506 151 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 LRSAM1Q6UWE0 723 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 TBC1D2BQ9UPU7 963 aa19.57■□□□□ 0.72
ATXN2-201ENST00000377617 HMOX1P09601 288 aa19.56■□□□□ 0.72
ATXN2-201ENST00000377617 RBM25P49756 843 aaKnown RBP19.56■□□□□ 0.72
ATXN2-201ENST00000377617 CCDC91Q7Z6B0 441 aa19.56■□□□□ 0.72
ATXN2-201ENST00000377617 SH2B1Q9NRF2 756 aaPredicted RBP19.56■□□□□ 0.72
ATXN2-201ENST00000377617 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
ATXN2-201ENST00000377617 RIC3Q7Z5B4 369 aa19.56■□□□□ 0.72
ATXN2-201ENST00000377617 NOL7Q9UMY1 257 aaKnown RBP19.56■□□□□ 0.72
ATXN2-201ENST00000377617 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
ATXN2-201ENST00000377617 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
ATXN2-201ENST00000377617 RASSF4Q9H2L5 321 aa19.55■□□□□ 0.72
ATXN2-201ENST00000377617 DHX29Q7Z478 1369 aaKnown RBP19.55■□□□□ 0.72
ATXN2-201ENST00000377617 HSPA4P34932 840 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 SLFN5Q08AF3 891 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 SRRTQ9BXP5 876 aaKnown RBP19.54■□□□□ 0.72
ATXN2-201ENST00000377617 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
ATXN2-201ENST00000377617 OGFRQ9NZT2 677 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 FGD6Q6ZV73 1430 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 CCDC150Q8NCX0 1101 aa19.54■□□□□ 0.72
ATXN2-201ENST00000377617 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 IFFO1Q0D2I5 559 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 RAD21O60216 631 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 TTC31Q49AM3 519 aaPredicted RBP19.53■□□□□ 0.72
ATXN2-201ENST00000377617 TBC1D32Q96NH3 1257 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 NAA15Q9BXJ9 866 aaKnown RBP19.53■□□□□ 0.72
ATXN2-201ENST00000377617 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 ZSCAN23Q3MJ62 389 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 CCDC184Q52MB2 194 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 EID1Q9Y6B2 187 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 GCOM1H8Y6P7 765 aaPredicted RBP19.53■□□□□ 0.72
ATXN2-201ENST00000377617 MYZAPP0CAP1 466 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 ZNF165P49910 485 aa19.53■□□□□ 0.72
ATXN2-201ENST00000377617 RSPH14Q9UHP6 348 aa19.52■□□□□ 0.72
ATXN2-201ENST00000377617 TDO2P48775 406 aa19.52■□□□□ 0.71
ATXN2-201ENST00000377617 SPECC1Q5M775 1068 aa19.52■□□□□ 0.71
ATXN2-201ENST00000377617 FERMT3Q86UX7 667 aa19.52■□□□□ 0.71
ATXN2-201ENST00000377617 KRT18P05783 430 aaKnown RBP19.51■□□□□ 0.71
ATXN2-201ENST00000377617 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
ATXN2-201ENST00000377617 TSR2Q969E8 191 aaKnown RBP19.51■□□□□ 0.71
ATXN2-201ENST00000377617 USO1O60763 962 aaKnown RBP19.51■□□□□ 0.71
ATXN2-201ENST00000377617 TERF1P54274 439 aa19.51■□□□□ 0.71
ATXN2-201ENST00000377617 UBE2HP62256 183 aa19.5■□□□□ 0.71
ATXN2-201ENST00000377617 SPATA24Q86W54 205 aa19.5■□□□□ 0.71
ATXN2-201ENST00000377617 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
ATXN2-201ENST00000377617 SLU7O95391 586 aaKnown RBP19.5■□□□□ 0.71
ATXN2-201ENST00000377617 TUBB4BP68371 445 aa19.5■□□□□ 0.71
ATXN2-201ENST00000377617 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
ATXN2-201ENST00000377617 CTDP1Q9Y5B0 961 aaPredicted RBP19.5■□□□□ 0.71
ATXN2-201ENST00000377617 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 STX1AQ16623 288 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 CCDC113Q9H0I3 377 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 CTNNA3Q9UI47 895 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 CAPN2P17655 700 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 CEP131Q9UPN4 1083 aa19.49■□□□□ 0.71
ATXN2-201ENST00000377617 EBAG9O00559 213 aa19.48■□□□□ 0.71
ATXN2-201ENST00000377617 SSR1P43307 286 aaKnown RBP19.48■□□□□ 0.71
ATXN2-201ENST00000377617 WASF1Q92558 559 aa19.48■□□□□ 0.71
ATXN2-201ENST00000377617 V9GYY5 206 aaPredicted RBP19.48■□□□□ 0.71
ATXN2-201ENST00000377617 CASTP20810 708 aaKnown RBP19.48■□□□□ 0.71
ATXN2-201ENST00000377617 BMP2KQ9NSY1 1161 aaPredicted RBP19.48■□□□□ 0.71
ATXN2-201ENST00000377617 GNG11P61952 73 aa19.47■□□□□ 0.71
ATXN2-201ENST00000377617 CKAP2LQ8IYA6 745 aa19.47■□□□□ 0.71
ATXN2-201ENST00000377617 KDM4AO75164 1064 aa19.47■□□□□ 0.71
ATXN2-201ENST00000377617 MICALL1Q8N3F8 863 aa19.47■□□□□ 0.71
ATXN2-201ENST00000377617 GAS2L2Q8NHY3 880 aa19.47■□□□□ 0.71
ATXN2-201ENST00000377617 YEATS4O95619 227 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 HCLS1P14317 486 aaPredicted RBP19.46■□□□□ 0.71
ATXN2-201ENST00000377617 CCDC57Q2TAC2 916 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 TMC6Q7Z403 805 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 LIMCH1Q9UPQ0 1083 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 SLC3A2P08195 630 aaKnown RBP19.46■□□□□ 0.71
ATXN2-201ENST00000377617 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 TUBBP07437 444 aa19.46■□□□□ 0.71
ATXN2-201ENST00000377617 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.45■□□□□ 0.72e-6■■■□□ 15.9
ATXN2-201ENST00000377617 CETN2P41208 172 aa19.45■□□□□ 0.7
ATXN2-201ENST00000377617 GABPB1Q06547 395 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms