RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 GSPT1P15170 499 aaKnown RBP18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 ARXQ96QS3 562 aa18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 MEIS3Q99687 375 aa18.16■□□□□ 0.5
ZKSCAN4-201ENST00000377294 F6X3S4 739 aa18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 CD2BP2O95400 341 aaKnown RBP18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 EYA1Q99502 592 aa18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 AMPHP49418 695 aa18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
ZKSCAN4-201ENST00000377294 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
ZKSCAN4-201ENST00000377294 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
ZKSCAN4-201ENST00000377294 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
ZKSCAN4-201ENST00000377294 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
ZKSCAN4-201ENST00000377294 KCNA6P17658 529 aa18.13■□□□□ 0.49
ZKSCAN4-201ENST00000377294 KIF2CQ99661 725 aa18.13■□□□□ 0.49
ZKSCAN4-201ENST00000377294 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
ZKSCAN4-201ENST00000377294 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
ZKSCAN4-201ENST00000377294 NLRP6P59044 892 aa18.12■□□□□ 0.49
ZKSCAN4-201ENST00000377294 INTS3Q68E01 1043 aaKnown RBP18.12■□□□□ 0.49
ZKSCAN4-201ENST00000377294 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
ZKSCAN4-201ENST00000377294 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
ZKSCAN4-201ENST00000377294 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
ZKSCAN4-201ENST00000377294 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 PLEKHM2Q8IWE5 1019 aa18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 PRKCSHP14314 528 aaPredicted RBP18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 FLT4P35916 1363 aa18.11■□□□□ 0.49
ZKSCAN4-201ENST00000377294 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 ARHGEF10O15013 1369 aa18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 GZF1Q9H116 711 aaPredicted RBP18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 DCTPP1Q9H773 170 aa18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 TBX22Q9Y458 520 aa18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 SBNO1A3KN83 1393 aa18.1■□□□□ 0.49
ZKSCAN4-201ENST00000377294 RTF1Q92541 710 aaKnown RBP18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 SLIT1O75093 1534 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
ZKSCAN4-201ENST00000377294 KIAA0232Q92628 1395 aa18.08■□□□□ 0.48
ZKSCAN4-201ENST00000377294 IGSF1Q8N6C5 1336 aa18.06■□□□□ 0.48
ZKSCAN4-201ENST00000377294 MCM4P33991 863 aa18.06■□□□□ 0.48
ZKSCAN4-201ENST00000377294 CHMP5Q9NZZ3 219 aa18.06■□□□□ 0.48
ZKSCAN4-201ENST00000377294 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 HOXC9P31274 260 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 KDRP35968 1356 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 THEMISQ8N1K5 641 aaPredicted RBP18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 ABTB2Q8N961 1025 aa18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 MARF1Q9Y4F3 1742 aaKnown RBP18.05■□□□□ 0.48
ZKSCAN4-201ENST00000377294 CDC45O75419 566 aa18.04■□□□□ 0.48
ZKSCAN4-201ENST00000377294 HSP90AB1P08238 724 aaKnown RBP18.04■□□□□ 0.48
ZKSCAN4-201ENST00000377294 KIF24Q5T7B8 1368 aa18.04■□□□□ 0.48
ZKSCAN4-201ENST00000377294 PTPRCP08575 1304 aa18.03■□□□□ 0.48
ZKSCAN4-201ENST00000377294 SETD1BQ9UPS6 1966 aaKnown RBP18.03■□□□□ 0.48
ZKSCAN4-201ENST00000377294 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
ZKSCAN4-201ENST00000377294 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
ZKSCAN4-201ENST00000377294 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
ZKSCAN4-201ENST00000377294 DDIT3P35638 169 aa18.02■□□□□ 0.47
ZKSCAN4-201ENST00000377294 IL17REQ8NFR9 667 aa18.02■□□□□ 0.47
ZKSCAN4-201ENST00000377294 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.47
ZKSCAN4-201ENST00000377294 NWD1Q149M9 1564 aa18.01■□□□□ 0.47
ZKSCAN4-201ENST00000377294 SDSP20132 328 aa18.01■□□□□ 0.47
ZKSCAN4-201ENST00000377294 SNX21Q969T3 373 aa18.01■□□□□ 0.47
ZKSCAN4-201ENST00000377294 RPAP2Q8IXW5 612 aaPredicted RBP18.01■□□□□ 0.47
ZKSCAN4-201ENST00000377294 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
ZKSCAN4-201ENST00000377294 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
ZKSCAN4-201ENST00000377294 FKBP5Q13451 457 aaPredicted RBP17.99■□□□□ 0.47
ZKSCAN4-201ENST00000377294 TNPO1Q92973 898 aaKnown RBP17.99■□□□□ 0.47
ZKSCAN4-201ENST00000377294 HAP1P54257 671 aaPredicted RBP17.98■□□□□ 0.47
ZKSCAN4-201ENST00000377294 FLIIQ13045 1269 aa17.98■□□□□ 0.47
ZKSCAN4-201ENST00000377294 HSP90AA1P07900 732 aaKnown RBP17.98■□□□□ 0.47
ZKSCAN4-201ENST00000377294 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
ZKSCAN4-201ENST00000377294 TRAK2O60296 914 aa17.97■□□□□ 0.47
ZKSCAN4-201ENST00000377294 XPCQ01831 940 aaPredicted RBP17.97■□□□□ 0.47
ZKSCAN4-201ENST00000377294 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
ZKSCAN4-201ENST00000377294 STK31Q9BXU1 1019 aa17.97■□□□□ 0.47
ZKSCAN4-201ENST00000377294 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
ZKSCAN4-201ENST00000377294 K7ELQ4 463 aaPredicted RBP17.96■□□□□ 0.47
ZKSCAN4-201ENST00000377294 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
ZKSCAN4-201ENST00000377294 PHAXQ9H814 394 aaKnown RBP17.96■□□□□ 0.47
ZKSCAN4-201ENST00000377294 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
ZKSCAN4-201ENST00000377294 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
ZKSCAN4-201ENST00000377294 USP26Q9BXU7 913 aa17.95■□□□□ 0.46
ZKSCAN4-201ENST00000377294 PHF8Q9UPP1 1060 aa17.95■□□□□ 0.46
ZKSCAN4-201ENST00000377294 CCT4P50991 539 aaKnown RBP17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 LRRC59Q96AG4 307 aaKnown RBP17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 LGR6Q9HBX8 967 aa17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 LTN1O94822 1766 aa17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 SSFA2P28290 1259 aa17.94■□□□□ 0.46
ZKSCAN4-201ENST00000377294 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms