RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 HMMRO75330 724 aa15.94■□□□□ 0.14
USP11-204ENST00000377107 MAP4K4O95819 1239 aaPredicted RBP15.94■□□□□ 0.14
USP11-204ENST00000377107 ROBO2Q9HCK4 1378 aa15.94■□□□□ 0.14
USP11-204ENST00000377107 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
USP11-204ENST00000377107 INTS3Q68E01 1043 aaKnown RBP15.94■□□□□ 0.14
USP11-204ENST00000377107 CEP85Q6P2H3 762 aa15.94■□□□□ 0.14
USP11-204ENST00000377107 MSH6P52701 1360 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 ABTB2Q8N961 1025 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 DCTPP1Q9H773 170 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 IL1RAPL2Q9NP60 686 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 TTC22Q5TAA0 569 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 CHAMP1Q96JM3 812 aa15.93■□□□□ 0.14
USP11-204ENST00000377107 TMEM131LA2VDJ0 1609 aa15.92■□□□□ 0.14
USP11-204ENST00000377107 ANKRD44Q8N8A2 993 aa15.92■□□□□ 0.14
USP11-204ENST00000377107 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
USP11-204ENST00000377107 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
USP11-204ENST00000377107 CHL1O00533 1208 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 RRAGDQ9NQL2 400 aaPredicted RBP15.91■□□□□ 0.14
USP11-204ENST00000377107 CPS1P31327 1500 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 EYA1Q99502 592 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 TNRQ92752 1358 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
USP11-204ENST00000377107 KIF2CQ99661 725 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 GRPEL1Q9HAV7 217 aa15.91■□□□□ 0.14
USP11-204ENST00000377107 ANXA1P04083 346 aa15.9■□□□□ 0.14
USP11-204ENST00000377107 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
USP11-204ENST00000377107 PREX1Q8TCU6 1659 aa15.9■□□□□ 0.14
USP11-204ENST00000377107 NEK4P51957 841 aa15.9■□□□□ 0.14
USP11-204ENST00000377107 OS9Q13438 667 aaPredicted RBP15.89■□□□□ 0.13
USP11-204ENST00000377107 USP32Q8NFA0 1604 aa15.89■□□□□ 0.13
USP11-204ENST00000377107 ST18O60284 1047 aa15.89■□□□□ 0.13
USP11-204ENST00000377107 PKP1Q13835 747 aa15.89■□□□□ 0.13
USP11-204ENST00000377107 ZGPATQ8N5A5 531 aaKnown RBP15.89■□□□□ 0.13
USP11-204ENST00000377107 ANP32BQ92688 251 aaKnown RBP15.89■□□□□ 0.13
USP11-204ENST00000377107 FAM43AQ8N2R8 423 aa15.89■□□□□ 0.13
USP11-204ENST00000377107 SNX21Q969T3 373 aa15.89■□□□□ 0.13
USP11-204ENST00000377107 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
USP11-204ENST00000377107 DTNBO60941 627 aa15.88■□□□□ 0.13
USP11-204ENST00000377107 GNAI2P04899 355 aa15.88■□□□□ 0.13
USP11-204ENST00000377107 ATP7BP35670 1465 aa15.88■□□□□ 0.13
USP11-204ENST00000377107 CAVIN1Q6NZI2 390 aaKnown RBP15.88■□□□□ 0.13
USP11-204ENST00000377107 MRE11P49959 708 aa15.88■□□□□ 0.13
USP11-204ENST00000377107 RABEP1Q15276 862 aa15.87■□□□□ 0.13
USP11-204ENST00000377107 NUTM1Q86Y26 1132 aa15.87■□□□□ 0.13
USP11-204ENST00000377107 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
USP11-204ENST00000377107 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
USP11-204ENST00000377107 FLIIQ13045 1269 aa15.87■□□□□ 0.13
USP11-204ENST00000377107 LARP6Q9BRS8 491 aaKnown RBP15.87■□□□□ 0.13
USP11-204ENST00000377107 UPF3BQ9BZI7 483 aaKnown RBP15.87■□□□□ 0.13
USP11-204ENST00000377107 LRRFIP2Q9Y608 721 aaKnown RBP15.87■□□□□ 0.13
USP11-204ENST00000377107 MED14O60244 1454 aa15.86■□□□□ 0.13
USP11-204ENST00000377107 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
USP11-204ENST00000377107 REC8O95072 547 aa15.86■□□□□ 0.13
USP11-204ENST00000377107 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
USP11-204ENST00000377107 CPSF1Q10570 1443 aaKnown RBP15.86■□□□□ 0.13
USP11-204ENST00000377107 GAS2L3Q86XJ1 694 aa15.86■□□□□ 0.13
USP11-204ENST00000377107 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
USP11-204ENST00000377107 USP26Q9BXU7 913 aa15.86■□□□□ 0.13
USP11-204ENST00000377107 HDGFL1Q5TGJ6 251 aa15.85■□□□□ 0.13
USP11-204ENST00000377107 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
USP11-204ENST00000377107 SURF6O75683 361 aaKnown RBP15.85■□□□□ 0.13
USP11-204ENST00000377107 PTCH1Q13635 1447 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 ERC2O15083 957 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 CLTCQ00610 1675 aaKnown RBP15.84■□□□□ 0.13
USP11-204ENST00000377107 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
USP11-204ENST00000377107 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
USP11-204ENST00000377107 PDE1AP54750 535 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
USP11-204ENST00000377107 AATKQ6ZMQ8 1374 aa15.84■□□□□ 0.13
USP11-204ENST00000377107 CCT4P50991 539 aaKnown RBP15.84■□□□□ 0.13
USP11-204ENST00000377107 RICTORQ6R327 1708 aa15.83■□□□□ 0.13
USP11-204ENST00000377107 TMEM2Q9UHN6 1383 aa15.83■□□□□ 0.13
USP11-204ENST00000377107 CIZ1Q9ULV3 898 aaPredicted RBP15.83■□□□□ 0.12
USP11-204ENST00000377107 PTPRCP08575 1304 aa15.83■□□□□ 0.12
USP11-204ENST00000377107 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
USP11-204ENST00000377107 PIK3R4Q99570 1358 aa15.82■□□□□ 0.12
USP11-204ENST00000377107 RBM27Q9P2N5 1060 aaKnown RBP15.82■□□□□ 0.12
USP11-204ENST00000377107 KCNA6P17658 529 aa15.81■□□□□ 0.12
USP11-204ENST00000377107 SKOR2Q2VWA4 1001 aaPredicted RBP15.81■□□□□ 0.12
USP11-204ENST00000377107 MX1P20591 662 aa15.81■□□□□ 0.12
USP11-204ENST00000377107 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
USP11-204ENST00000377107 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
USP11-204ENST00000377107 MCCP23508 829 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 PSME1Q06323 249 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 PLEKHG3A1L390 1219 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 GNAI3P08754 354 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 TEFQ10587 303 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 RNF214Q8ND24 703 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 AIMP1Q12904 312 aaKnown RBP15.8■□□□□ 0.12
USP11-204ENST00000377107 MPRIPQ6WCQ1 1025 aa15.8■□□□□ 0.12
USP11-204ENST00000377107 NASPP49321 788 aaPredicted RBP15.79■□□□□ 0.12
USP11-204ENST00000377107 LRRC59Q96AG4 307 aaKnown RBP15.79■□□□□ 0.12
USP11-204ENST00000377107 SRGAP3O43295 1099 aa15.79■□□□□ 0.12
USP11-204ENST00000377107 NUCB2P80303 420 aa15.79■□□□□ 0.12
USP11-204ENST00000377107 IL17REQ8NFR9 667 aa15.79■□□□□ 0.12
USP11-204ENST00000377107 GDPD2Q9HCC8 539 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms