RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MCCP23508 829 aa14.29□□□□□ -0.12
DDR1-227ENST00000376570 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
DDR1-227ENST00000376570 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
DDR1-227ENST00000376570 CCDC8Q9H0W5 538 aaPredicted RBP14.29□□□□□ -0.12
DDR1-227ENST00000376570 INSRP06213 1382 aa14.29□□□□□ -0.12
DDR1-227ENST00000376570 IFIT2P09913 472 aaKnown RBP14.29□□□□□ -0.12
DDR1-227ENST00000376570 ST18O60284 1047 aa14.28□□□□□ -0.12
DDR1-227ENST00000376570 PRPF40AO75400 957 aaKnown RBP14.28□□□□□ -0.12
DDR1-227ENST00000376570 CAVIN1Q6NZI2 390 aaKnown RBP14.28□□□□□ -0.12
DDR1-227ENST00000376570 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
DDR1-227ENST00000376570 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
DDR1-227ENST00000376570 INTS3Q68E01 1043 aaKnown RBP14.28□□□□□ -0.12
DDR1-227ENST00000376570 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
DDR1-227ENST00000376570 GCC1Q96CN9 775 aa14.28□□□□□ -0.12
DDR1-227ENST00000376570 ROBO2Q9HCK4 1378 aa14.27□□□□□ -0.12
DDR1-227ENST00000376570 NUCB1Q02818 461 aa14.27□□□□□ -0.12
DDR1-227ENST00000376570 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.12
DDR1-227ENST00000376570 DNAJC2Q99543 621 aaKnown RBP14.27□□□□□ -0.12
DDR1-227ENST00000376570 SDSP20132 328 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 STK3Q13188 491 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 SRCIN1Q9C0H9 1055 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 NDUFB9Q9Y6M9 179 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 SYNMO15061 1565 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 ABCC11Q96J66 1382 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 IQGAP3Q86VI3 1631 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 PRAMEF22A3QJZ6 481 aa14.27□□□□□ -0.13
DDR1-227ENST00000376570 MCM4P33991 863 aa14.26□□□□□ -0.13
DDR1-227ENST00000376570 CPA1P15085 419 aa14.26□□□□□ -0.13
DDR1-227ENST00000376570 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
DDR1-227ENST00000376570 LRRCC1Q9C099 1032 aa14.26□□□□□ -0.13
DDR1-227ENST00000376570 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
DDR1-227ENST00000376570 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
DDR1-227ENST00000376570 NPHP1O15259 732 aa14.25□□□□□ -0.13
DDR1-227ENST00000376570 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
DDR1-227ENST00000376570 DNTTIP2Q5QJE6 756 aaKnown RBP14.25□□□□□ -0.13
DDR1-227ENST00000376570 PNMA6EA0A0J9YXQ4 647 aa14.25□□□□□ -0.13
DDR1-227ENST00000376570 CD2BP2O95400 341 aaKnown RBP14.25□□□□□ -0.13
DDR1-227ENST00000376570 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 PPP1R42Q7Z4L9 355 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 NBPF6Q5VWK0 638 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 NBPF4Q96M43 638 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 BOLA2Q9H3K6 86 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
DDR1-227ENST00000376570 REC8O95072 547 aa14.23□□□□□ -0.13
DDR1-227ENST00000376570 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
DDR1-227ENST00000376570 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
DDR1-227ENST00000376570 CEP152O94986 1710 aa14.23□□□□□ -0.13
DDR1-227ENST00000376570 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
DDR1-227ENST00000376570 MSH6P52701 1360 aa14.23□□□□□ -0.13
DDR1-227ENST00000376570 KDM5AP29375 1690 aaKnown RBP14.23□□□□□ -0.13
DDR1-227ENST00000376570 TNPO1Q92973 898 aaKnown RBP14.23□□□□□ -0.13
DDR1-227ENST00000376570 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 CT47B1P0C2W7 299 aaPredicted RBP14.22□□□□□ -0.13
DDR1-227ENST00000376570 HSP90AA2PQ14568 343 aaPredicted RBP14.22□□□□□ -0.13
DDR1-227ENST00000376570 KRT28Q7Z3Y7 464 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 AACSQ86V21 672 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 SMC5Q8IY18 1101 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 PRDM11Q9NQV5 511 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 MADDQ8WXG6 1647 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 GNAI3P08754 354 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 HDAC1Q13547 482 aaPredicted RBP14.22□□□□□ -0.13
DDR1-227ENST00000376570 CEP85Q6P2H3 762 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 ANKRD24Q8TF21 1146 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 K7ELQ4 463 aaPredicted RBP14.22□□□□□ -0.13
DDR1-227ENST00000376570 HOXC9P31274 260 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
DDR1-227ENST00000376570 NSD2O96028 1365 aa14.22□□□□□ -0.13
DDR1-227ENST00000376570 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.13
DDR1-227ENST00000376570 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.13
DDR1-227ENST00000376570 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 FERMT3Q86UX7 667 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 NUTM2AQ8IVF1 878 aaPredicted RBP14.21□□□□□ -0.13
DDR1-227ENST00000376570 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
DDR1-227ENST00000376570 MAP3K2Q9Y2U5 619 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 ABCC3O15438 1527 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 UNC13BO14795 1591 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
DDR1-227ENST00000376570 IL17REQ8NFR9 667 aa14.21□□□□□ -0.14
DDR1-227ENST00000376570 ZBTB3Q9H5J0 574 aa14.21□□□□□ -0.14
DDR1-227ENST00000376570 MX1P20591 662 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 MYD88Q99836 296 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 NBPF7P0C2Y1 421 aaPredicted RBP14.2□□□□□ -0.14
DDR1-227ENST00000376570 FSD1Q9BTV5 496 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 EFCAB6Q5THR3 1501 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 FIBPO43427 364 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 CCT4P50991 539 aaKnown RBP14.2□□□□□ -0.14
DDR1-227ENST00000376570 CLASRPQ8N2M8 674 aaKnown RBP14.2□□□□□ -0.14
DDR1-227ENST00000376570 NFATC2IPQ8NCF5 419 aa14.2□□□□□ -0.14
DDR1-227ENST00000376570 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
DDR1-227ENST00000376570 GOLGA6L4A6NEF3 574 aa14.19□□□□□ -0.14
DDR1-227ENST00000376570 PLXNC1O60486 1568 aa14.19□□□□□ -0.14
DDR1-227ENST00000376570 PKP1Q13835 747 aa14.19□□□□□ -0.14
DDR1-227ENST00000376570 ERC2O15083 957 aa14.19□□□□□ -0.14
DDR1-227ENST00000376570 GSPT1P15170 499 aaKnown RBP14.19□□□□□ -0.14
DDR1-227ENST00000376570 USP19O94966 1318 aa14.18□□□□□ -0.14
DDR1-227ENST00000376570 GCP02774 474 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms