RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 FAM196AQ6ZSG2 479 aa27.88■■■□□ 2.05
HLA-C-201ENST00000376228 RUNDC1Q96C34 613 aa27.88■■■□□ 2.05
HLA-C-201ENST00000376228 DIAPH1O60610 1272 aaKnown RBP27.87■■■□□ 2.05
HLA-C-201ENST00000376228 HSP90AB2PQ58FF8 381 aa27.87■■■□□ 2.05
HLA-C-201ENST00000376228 CDCA7Q9BWT1 371 aaPredicted RBP27.87■■■□□ 2.05
HLA-C-201ENST00000376228 FLT4P35916 1363 aa27.86■■■□□ 2.05
HLA-C-201ENST00000376228 TRIM37O94972 964 aa27.86■■■□□ 2.05
HLA-C-201ENST00000376228 SBF2Q86WG5 1849 aa27.86■■■□□ 2.05
HLA-C-201ENST00000376228 PPM1GO15355 546 aaPredicted RBP27.85■■■□□ 2.05
HLA-C-201ENST00000376228 CCDC146Q8IYE0 955 aa27.85■■■□□ 2.05
HLA-C-201ENST00000376228 APAF1O14727 1248 aa27.84■■■□□ 2.05
HLA-C-201ENST00000376228 OVOS2A0A0G2JMS6 1433 aa27.84■■■□□ 2.05
HLA-C-201ENST00000376228 TNS2Q63HR2 1409 aa27.83■■■□□ 2.05
HLA-C-201ENST00000376228 IL2RBP14784 551 aa27.82■■■□□ 2.04
HLA-C-201ENST00000376228 SUPT16HQ9Y5B9 1047 aaKnown RBP27.82■■■□□ 2.04
HLA-C-201ENST00000376228 SENP3-EIF4A1A0A087X0R7 540 aa27.82■■■□□ 2.04
HLA-C-201ENST00000376228 EXOC5O00471 708 aa27.82■■■□□ 2.04
HLA-C-201ENST00000376228 NEFLP07196 543 aa27.82■■■□□ 2.04
HLA-C-201ENST00000376228 U2AF1L5P0DN76 240 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-201ENST00000376228 U2AF1Q01081 240 aaKnown RBP eCLIP27.82■■■□□ 2.04
HLA-C-201ENST00000376228 MARCH10Q8NA82 808 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-201ENST00000376228 SALL2Q9Y467 1007 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-201ENST00000376228 KIF24Q5T7B8 1368 aa27.81■■■□□ 2.04
HLA-C-201ENST00000376228 PNNQ9H307 717 aaKnown RBP27.81■■■□□ 2.04
HLA-C-201ENST00000376228 USHBP1Q8N6Y0 703 aa27.8■■■□□ 2.04
HLA-C-201ENST00000376228 NBPF6Q5VWK0 638 aa27.79■■■□□ 2.04
HLA-C-201ENST00000376228 NBPF4Q96M43 638 aa27.79■■■□□ 2.04
HLA-C-201ENST00000376228 BAG6P46379 1132 aa27.78■■■□□ 2.04
HLA-C-201ENST00000376228 EN1Q05925 392 aaPredicted RBP27.77■■■□□ 2.04
HLA-C-201ENST00000376228 CCDC27Q2M243 656 aa27.77■■■□□ 2.04
HLA-C-201ENST00000376228 RNF123Q5XPI4 1314 aa27.77■■■□□ 2.04
HLA-C-201ENST00000376228 GOLGA2Q08379 1002 aa27.77■■■□□ 2.04
HLA-C-201ENST00000376228 PLEKHF1Q96S99 279 aa27.77■■■□□ 2.04
HLA-C-201ENST00000376228 FCHSD2O94868 740 aa27.76■■■□□ 2.03
HLA-C-201ENST00000376228 IL13P35225 146 aa27.76■■■□□ 2.03
HLA-C-201ENST00000376228 SHANK3Q9BYB0 1731 aa27.75■■■□□ 2.03
HLA-C-201ENST00000376228 MEGF6O75095 1541 aa27.75■■■□□ 2.03
HLA-C-201ENST00000376228 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
HLA-C-201ENST00000376228 CDCA7LQ96GN5 454 aa27.75■■■□□ 2.03
HLA-C-201ENST00000376228 APBA3O96018 575 aa27.73■■■□□ 2.03
HLA-C-201ENST00000376228 TRMT2AQ8IZ69 625 aaKnown RBP27.73■■■□□ 2.03
HLA-C-201ENST00000376228 ERICH6BQ5W0A0 696 aa27.72■■■□□ 2.03
HLA-C-201ENST00000376228 PTF1AQ7RTS3 328 aa27.72■■■□□ 2.03
HLA-C-201ENST00000376228 SLFN5Q08AF3 891 aa27.71■■■□□ 2.03
HLA-C-201ENST00000376228 FKBP8Q14318 412 aa27.71■■■□□ 2.03
HLA-C-201ENST00000376228 KAT6BQ8WYB5 2073 aa27.7■■■□□ 2.02
HLA-C-201ENST00000376228 EZH2Q15910 746 aaKnown RBP27.7■■■□□ 2.02
HLA-C-201ENST00000376228 WWC1Q8IX03 1113 aa27.7■■■□□ 2.02
HLA-C-201ENST00000376228 DUSP27Q5VZP5 1158 aa27.68■■■□□ 2.02
HLA-C-201ENST00000376228 DDX54Q8TDD1 881 aaKnown RBP27.68■■■□□ 2.02
HLA-C-201ENST00000376228 BCL9O00512 1426 aa27.68■■■□□ 2.02
HLA-C-201ENST00000376228 NHSQ6T4R5 1651 aa27.68■■■□□ 2.02
HLA-C-201ENST00000376228 WDR63Q8IWG1 891 aa27.67■■■□□ 2.02
HLA-C-201ENST00000376228 RSPH6AQ9H0K4 717 aa27.67■■■□□ 2.02
HLA-C-201ENST00000376228 E9PSI1 815 aa27.67■■■□□ 2.02
HLA-C-201ENST00000376228 RREB1Q92766 1687 aa27.66■■■□□ 2.02
HLA-C-201ENST00000376228 EIF4A2Q14240 407 aaKnown RBP27.66■■■□□ 2.02
HLA-C-201ENST00000376228 RAPGEF4Q8WZA2 1011 aa27.66■■■□□ 2.02
HLA-C-201ENST00000376228 ACSBG1Q96GR2 724 aa27.66■■■□□ 2.02
HLA-C-201ENST00000376228 MAPK8IP3Q9UPT6 1336 aa27.65■■■□□ 2.02
HLA-C-201ENST00000376228 CAMKK2Q96RR4 588 aa27.65■■■□□ 2.02
HLA-C-201ENST00000376228 EYA1Q99502 592 aa27.64■■■□□ 2.02
HLA-C-201ENST00000376228 RCAN3Q9UKA8 241 aa27.64■■■□□ 2.02
HLA-C-201ENST00000376228 NUP188Q5SRE5 1749 aa27.64■■■□□ 2.01
HLA-C-201ENST00000376228 DOT1LQ8TEK3 1739 aa27.64■■■□□ 2.01
HLA-C-201ENST00000376228 KCNQ2O43526 872 aa27.63■■■□□ 2.01
HLA-C-201ENST00000376228 TMPOP42166 694 aaKnown RBP27.63■■■□□ 2.01
HLA-C-201ENST00000376228 ZCRB1Q8TBF4 217 aaKnown RBP27.63■■■□□ 2.01
HLA-C-201ENST00000376228 BCL11BQ9C0K0 894 aaPredicted RBP27.63■■■□□ 2.01
HLA-C-201ENST00000376228 NCAPD2Q15021 1401 aa27.63■■■□□ 2.01
HLA-C-201ENST00000376228 TATP17735 454 aaPredicted RBP27.62■■■□□ 2.01
HLA-C-201ENST00000376228 RGPD3A6NKT7 1758 aaPredicted RBP27.61■■■□□ 2.01
HLA-C-201ENST00000376228 RGPD4Q7Z3J3 1758 aa27.61■■■□□ 2.01
HLA-C-201ENST00000376228 PKD1L3Q7Z443 1732 aa27.61■■■□□ 2.01
HLA-C-201ENST00000376228 BTAF1O14981 1849 aa27.61■■■□□ 2.01
HLA-C-201ENST00000376228 NEFMP07197 916 aa27.59■■■□□ 2.01
HLA-C-201ENST00000376228 PRKAR2BP31323 418 aa27.59■■■□□ 2.01
HLA-C-201ENST00000376228 RRP7AQ9Y3A4 280 aaKnown RBP27.58■■■□□ 2.01
HLA-C-201ENST00000376228 SPINK5Q9NQ38 1064 aaPredicted RBP27.57■■■□□ 2
HLA-C-201ENST00000376228 NEUROD2Q15784 382 aa27.57■■■□□ 2
HLA-C-201ENST00000376228 PSDA5PKW4 1024 aaPredicted RBP27.55■■■□□ 2
HLA-C-201ENST00000376228 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
HLA-C-201ENST00000376228 IL16Q14005 1332 aa27.55■■■□□ 2
HLA-C-201ENST00000376228 IGSF1Q8N6C5 1336 aa27.54■■■□□ 2
HLA-C-201ENST00000376228 PLSCR1O15162 318 aa27.53■■■□□ 2
HLA-C-201ENST00000376228 HMOX1P09601 288 aa27.53■■■□□ 2
HLA-C-201ENST00000376228 SRCAPQ6ZRS2 3230 aa27.53■■■□□ 2
HLA-C-201ENST00000376228 NFE2L2Q16236 605 aa27.52■■■□□ 2
HLA-C-201ENST00000376228 PCDH11XQ9BZA7 1347 aa27.52■■■□□ 2
HLA-C-201ENST00000376228 PCDH11YQ9BZA8 1340 aa27.52■■■□□ 2
HLA-C-201ENST00000376228 DLG5Q8TDM6 1919 aa27.52■■■□□ 2
HLA-C-201ENST00000376228 RRP1P56182 461 aaKnown RBP27.51■■■□□ 2
HLA-C-201ENST00000376228 RIPK4P57078 832 aa27.51■■■□□ 2
HLA-C-201ENST00000376228 SYTL4Q96C24 671 aaPredicted RBP27.51■■■□□ 2
HLA-C-201ENST00000376228 KDRP35968 1356 aa27.51■■■□□ 2
HLA-C-201ENST00000376228 TOGARAM1Q9Y4F4 1720 aa27.51■■□□□ 1.99
HLA-C-201ENST00000376228 CYP27B1O15528 508 aa27.5■■□□□ 1.99
HLA-C-201ENST00000376228 PHACTR3Q96KR7 559 aa27.5■■□□□ 1.99
HLA-C-201ENST00000376228 PRIM1P49642 420 aaKnown RBP27.49■■□□□ 1.99
HLA-C-201ENST00000376228 R3HDM1Q15032 1099 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms