RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 EYA1Q99502 592 aa27.3■■□□□ 1.96
C6orf48-205ENST00000375640 EIF4A2Q14240 407 aaKnown RBP27.28■■□□□ 1.96
C6orf48-205ENST00000375640 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
C6orf48-205ENST00000375640 PRIM1P49642 420 aaKnown RBP27.25■■□□□ 1.95
C6orf48-205ENST00000375640 NCAPD2Q15021 1401 aa27.24■■□□□ 1.95
C6orf48-205ENST00000375640 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
C6orf48-205ENST00000375640 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
C6orf48-205ENST00000375640 SYTL4Q96C24 671 aaPredicted RBP27.22■■□□□ 1.95
C6orf48-205ENST00000375640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.22■■□□□ 1.95
C6orf48-205ENST00000375640 SPG7Q9UQ90 795 aa27.21■■□□□ 1.95
C6orf48-205ENST00000375640 SBF2Q86WG5 1849 aa27.2■■□□□ 1.95
C6orf48-205ENST00000375640 SRCAPQ6ZRS2 3230 aa27.19■■□□□ 1.94
C6orf48-205ENST00000375640 CYP27B1O15528 508 aa27.19■■□□□ 1.94
C6orf48-205ENST00000375640 CC2D1BQ5T0F9 858 aaKnown RBP27.18■■□□□ 1.94
C6orf48-205ENST00000375640 IGSF1Q8N6C5 1336 aa27.17■■□□□ 1.94
C6orf48-205ENST00000375640 ANKRD26Q9UPS8 1709 aa27.17■■□□□ 1.94
C6orf48-205ENST00000375640 ANO8Q9HCE9 1232 aaPredicted RBP27.17■■□□□ 1.94
C6orf48-205ENST00000375640 NPC1L1Q9UHC9 1359 aa27.17■■□□□ 1.94
C6orf48-205ENST00000375640 RREB1Q92766 1687 aa27.17■■□□□ 1.94
C6orf48-205ENST00000375640 STK32BQ9NY57 414 aa27.16■■□□□ 1.94
C6orf48-205ENST00000375640 NHSQ6T4R5 1651 aa27.16■■□□□ 1.94
C6orf48-205ENST00000375640 RGPD2P0DJD1 1756 aa27.16■■□□□ 1.94
C6orf48-205ENST00000375640 MTHFSP49914 203 aa27.15■■□□□ 1.94
C6orf48-205ENST00000375640 NKX1-1Q15270 411 aaPredicted RBP27.15■■□□□ 1.94
C6orf48-205ENST00000375640 SLC27A3Q5K4L6 730 aa27.15■■□□□ 1.94
C6orf48-205ENST00000375640 RGPD3A6NKT7 1758 aaPredicted RBP27.14■■□□□ 1.94
C6orf48-205ENST00000375640 RGPD4Q7Z3J3 1758 aa27.14■■□□□ 1.94
C6orf48-205ENST00000375640 MAP2P11137 1827 aaKnown RBP27.13■■□□□ 1.93
C6orf48-205ENST00000375640 PLEKHG2Q9H7P9 1386 aa27.13■■□□□ 1.93
C6orf48-205ENST00000375640 SLC15A2Q16348 729 aa27.13■■□□□ 1.93
C6orf48-205ENST00000375640 IL13P35225 146 aa27.12■■□□□ 1.93
C6orf48-205ENST00000375640 NUP188Q5SRE5 1749 aa27.12■■□□□ 1.93
C6orf48-205ENST00000375640 IFNL2Q8IZJ0 200 aa27.11■■□□□ 1.93
C6orf48-205ENST00000375640 LRRC4BQ9NT99 713 aa27.11■■□□□ 1.93
C6orf48-205ENST00000375640 PHKG2P15735 406 aa27.09■■□□□ 1.93
C6orf48-205ENST00000375640 PLEKHO1Q53GL0 409 aaPredicted RBP27.09■■□□□ 1.93
C6orf48-205ENST00000375640 AMOTQ4VCS5 1084 aa27.08■■□□□ 1.93
C6orf48-205ENST00000375640 MPRIPQ6WCQ1 1025 aa27.08■■□□□ 1.93
C6orf48-205ENST00000375640 SULT6B1Q6IMI4 303 aa27.07■■□□□ 1.92
C6orf48-205ENST00000375640 SPON1Q9HCB6 807 aa27.07■■□□□ 1.92
C6orf48-205ENST00000375640 CNGB1Q14028 1251 aaPredicted RBP27.05■■□□□ 1.92
C6orf48-205ENST00000375640 AEBP1Q8IUX7 1158 aa27.05■■□□□ 1.92
C6orf48-205ENST00000375640 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
C6orf48-205ENST00000375640 SHANK3Q9BYB0 1731 aa27.04■■□□□ 1.92
C6orf48-205ENST00000375640 DIAPH1O60610 1272 aaKnown RBP27.03■■□□□ 1.92
C6orf48-205ENST00000375640 HSP90AB1P08238 724 aaKnown RBP27.03■■□□□ 1.92
C6orf48-205ENST00000375640 PIGBQ92521 554 aa27.03■■□□□ 1.92
C6orf48-205ENST00000375640 SMARCC1Q92922 1105 aaPredicted RBP27.03■■□□□ 1.92
C6orf48-205ENST00000375640 CCNL1Q9UK58 526 aaPredicted RBP27.03■■□□□ 1.92
C6orf48-205ENST00000375640 LRP5O75197 1615 aa27.02■■□□□ 1.92
C6orf48-205ENST00000375640 AKT1S1Q96B36 256 aa27.02■■□□□ 1.92
C6orf48-205ENST00000375640 PDGFDQ9GZP0 370 aaPredicted RBP27.02■■□□□ 1.92
C6orf48-205ENST00000375640 KDRP35968 1356 aa27.01■■□□□ 1.91
C6orf48-205ENST00000375640 BTAF1O14981 1849 aa27.01■■□□□ 1.91
C6orf48-205ENST00000375640 KCNQ4P56696 695 aa27■■□□□ 1.91
C6orf48-205ENST00000375640 ZNF827Q17R98 1081 aa27■■□□□ 1.91
C6orf48-205ENST00000375640 ZNF530Q6P9A1 599 aaPredicted RBP26.99■■□□□ 1.91
C6orf48-205ENST00000375640 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
C6orf48-205ENST00000375640 TMOD3Q9NYL9 352 aa26.99■■□□□ 1.91
C6orf48-205ENST00000375640 ERVV-2B6SEH9 535 aa26.98■■□□□ 1.91
C6orf48-205ENST00000375640 PKD1L3Q7Z443 1732 aa26.98■■□□□ 1.91
C6orf48-205ENST00000375640 PALLDQ8WX93 1383 aa26.97■■□□□ 1.91
C6orf48-205ENST00000375640 DOT1LQ8TEK3 1739 aa26.96■■□□□ 1.91
C6orf48-205ENST00000375640 ZBTB7AO95365 584 aa26.96■■□□□ 1.91
C6orf48-205ENST00000375640 C1orf141Q5JVX7 400 aa26.96■■□□□ 1.91
C6orf48-205ENST00000375640 KAT6BQ8WYB5 2073 aa26.96■■□□□ 1.91
C6orf48-205ENST00000375640 TFCP2L1Q9NZI6 479 aa26.95■■□□□ 1.9
C6orf48-205ENST00000375640 MTFR1LQ9H019 292 aa26.94■■□□□ 1.9
C6orf48-205ENST00000375640 HMOX1P09601 288 aa26.93■■□□□ 1.9
C6orf48-205ENST00000375640 PPP1R1BQ9UD71 204 aaPredicted RBP26.93■■□□□ 1.9
C6orf48-205ENST00000375640 ATF5Q9Y2D1 282 aaPredicted RBP26.93■■□□□ 1.9
C6orf48-205ENST00000375640 CFAP53Q96M91 514 aa26.92■■□□□ 1.9
C6orf48-205ENST00000375640 PAPPAQ13219 1627 aa26.91■■□□□ 1.9
C6orf48-205ENST00000375640 SLC16A10Q8TF71 515 aa26.91■■□□□ 1.9
C6orf48-205ENST00000375640 ASAP1Q9ULH1 1129 aa26.91■■□□□ 1.9
C6orf48-205ENST00000375640 PPP2R1AP30153 589 aa26.9■■□□□ 1.9
C6orf48-205ENST00000375640 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
C6orf48-205ENST00000375640 LOC102724428A0A0B4J2F2 783 aa26.89■■□□□ 1.9
C6orf48-205ENST00000375640 U2SURPO15042 1029 aaKnown RBP26.89■■□□□ 1.9
C6orf48-205ENST00000375640 PTGER2P43116 358 aa26.89■■□□□ 1.9
C6orf48-205ENST00000375640 SIK1P57059 783 aa26.89■■□□□ 1.9
C6orf48-205ENST00000375640 CABP4P57796 275 aa26.89■■□□□ 1.9
C6orf48-205ENST00000375640 AKAP4Q5JQC9 854 aa26.89■■□□□ 1.9
C6orf48-205ENST00000375640 PNPLA7Q6ZV29 1317 aa26.89■■□□□ 1.89
C6orf48-205ENST00000375640 NUDCQ9Y266 331 aa26.86■■□□□ 1.89
C6orf48-205ENST00000375640 COL3A1P02461 1466 aaPredicted RBP26.85■■□□□ 1.89
C6orf48-205ENST00000375640 CASZ1Q86V15 1759 aa26.84■■□□□ 1.89
C6orf48-205ENST00000375640 KDM6AO15550 1401 aaPredicted RBP26.84■■□□□ 1.89
C6orf48-205ENST00000375640 MTHFSDQ2M296 383 aaKnown RBP26.84■■□□□ 1.89
C6orf48-205ENST00000375640 FLAD1Q8NFF5 587 aa26.84■■□□□ 1.89
C6orf48-205ENST00000375640 SGIP1Q9BQI5 828 aa26.84■■□□□ 1.89
C6orf48-205ENST00000375640 LY75O60449 1722 aa26.83■■□□□ 1.89
C6orf48-205ENST00000375640 TOGARAM1Q9Y4F4 1720 aa26.83■■□□□ 1.89
C6orf48-205ENST00000375640 ATP6V1AP38606 617 aa26.83■■□□□ 1.89
C6orf48-205ENST00000375640 NFATC2IPQ8NCF5 419 aa26.83■■□□□ 1.89
C6orf48-205ENST00000375640 COL23A1Q86Y22 540 aaPredicted RBP26.82■■□□□ 1.88
C6orf48-205ENST00000375640 AK7Q96M32 723 aa26.8■■□□□ 1.88
C6orf48-205ENST00000375640 RNMTO43148 476 aaKnown RBP26.79■■□□□ 1.88
C6orf48-205ENST00000375640 MSH5O43196 834 aa26.79■■□□□ 1.88
C6orf48-205ENST00000375640 ITPK1Q13572 414 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms