RNA–Protein interactions for RNA: ENST00000375446.4

NINJ1-201, Transcript of ninjurin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NINJ1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-201ENST00000375446 CNGB1Q14028 1251 aaPredicted RBP29.58■■■□□ 2.33
NINJ1-201ENST00000375446 PARD3Q8TEW0 1356 aa29.57■■■□□ 2.32
NINJ1-201ENST00000375446 ACSBG1Q96GR2 724 aa29.56■■■□□ 2.32
NINJ1-201ENST00000375446 SBF2Q86WG5 1849 aa29.56■■■□□ 2.32
NINJ1-201ENST00000375446 KCNQ2O43526 872 aa29.55■■■□□ 2.32
NINJ1-201ENST00000375446 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
NINJ1-201ENST00000375446 MTHFSP49914 203 aa29.54■■■□□ 2.32
NINJ1-201ENST00000375446 IGSF1Q8N6C5 1336 aa29.51■■■□□ 2.32
NINJ1-201ENST00000375446 PLSCR1O15162 318 aa29.51■■■□□ 2.31
NINJ1-201ENST00000375446 PCDH11XQ9BZA7 1347 aa29.49■■■□□ 2.31
NINJ1-201ENST00000375446 PCDH11YQ9BZA8 1340 aa29.49■■■□□ 2.31
NINJ1-201ENST00000375446 SHANK3Q9BYB0 1731 aa29.48■■■□□ 2.31
NINJ1-201ENST00000375446 NHSQ6T4R5 1651 aa29.48■■■□□ 2.31
NINJ1-201ENST00000375446 IL13P35225 146 aa29.48■■■□□ 2.31
NINJ1-201ENST00000375446 SPG7Q9UQ90 795 aa29.46■■■□□ 2.31
NINJ1-201ENST00000375446 CYP27B1O15528 508 aa29.45■■■□□ 2.31
NINJ1-201ENST00000375446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.45■■■□□ 2.31
NINJ1-201ENST00000375446 PRIM1P49642 420 aaKnown RBP29.43■■■□□ 2.3
NINJ1-201ENST00000375446 RREB1Q92766 1687 aa29.42■■■□□ 2.3
NINJ1-201ENST00000375446 SYTL4Q96C24 671 aaPredicted RBP29.42■■■□□ 2.3
NINJ1-201ENST00000375446 PLEKHG2Q9H7P9 1386 aa29.41■■■□□ 2.3
NINJ1-201ENST00000375446 PKD1L3Q7Z443 1732 aa29.41■■■□□ 2.3
NINJ1-201ENST00000375446 AEBP1Q8IUX7 1158 aa29.41■■■□□ 2.3
NINJ1-201ENST00000375446 PROM2Q8N271 834 aa29.41■■■□□ 2.3
NINJ1-201ENST00000375446 RGPD3A6NKT7 1758 aaPredicted RBP29.41■■■□□ 2.3
NINJ1-201ENST00000375446 RGPD4Q7Z3J3 1758 aa29.41■■■□□ 2.3
NINJ1-201ENST00000375446 PSDA5PKW4 1024 aaPredicted RBP29.4■■■□□ 2.3
NINJ1-201ENST00000375446 SULT6B1Q6IMI4 303 aa29.4■■■□□ 2.3
NINJ1-201ENST00000375446 DIAPH1O60610 1272 aaKnown RBP29.39■■■□□ 2.3
NINJ1-201ENST00000375446 TXNRD1Q16881 649 aa29.39■■■□□ 2.3
NINJ1-201ENST00000375446 R3HDM1Q15032 1099 aaKnown RBP29.38■■■□□ 2.29
NINJ1-201ENST00000375446 NBPF14Q5TI25 921 aa29.38■■■□□ 2.29
NINJ1-201ENST00000375446 NKX1-1Q15270 411 aaPredicted RBP29.37■■■□□ 2.29
NINJ1-201ENST00000375446 KDRP35968 1356 aa29.37■■■□□ 2.29
NINJ1-201ENST00000375446 NUP188Q5SRE5 1749 aa29.37■■■□□ 2.29
NINJ1-201ENST00000375446 DOT1LQ8TEK3 1739 aa29.37■■■□□ 2.29
NINJ1-201ENST00000375446 KAT6BQ8WYB5 2073 aa29.36■■■□□ 2.29
NINJ1-201ENST00000375446 PHKG2P15735 406 aa29.35■■■□□ 2.29
NINJ1-201ENST00000375446 PPP2R1AP30153 589 aa29.35■■■□□ 2.29
NINJ1-201ENST00000375446 PLEKHO1Q53GL0 409 aaPredicted RBP29.35■■■□□ 2.29
NINJ1-201ENST00000375446 IFNL2Q8IZJ0 200 aa29.35■■■□□ 2.29
NINJ1-201ENST00000375446 BTAF1O14981 1849 aa29.35■■■□□ 2.29
NINJ1-201ENST00000375446 DDX10Q13206 875 aaKnown RBP29.34■■■□□ 2.29
NINJ1-201ENST00000375446 COL3A1P02461 1466 aaPredicted RBP29.34■■■□□ 2.29
NINJ1-201ENST00000375446 AMOTQ4VCS5 1084 aa29.33■■■□□ 2.29
NINJ1-201ENST00000375446 CFAP53Q96M91 514 aa29.32■■■□□ 2.28
NINJ1-201ENST00000375446 HMOX1P09601 288 aa29.3■■■□□ 2.28
NINJ1-201ENST00000375446 ZNF530Q6P9A1 599 aaPredicted RBP29.29■■■□□ 2.28
NINJ1-201ENST00000375446 MPRIPQ6WCQ1 1025 aa29.29■■■□□ 2.28
NINJ1-201ENST00000375446 ANO8Q9HCE9 1232 aaPredicted RBP29.29■■■□□ 2.28
NINJ1-201ENST00000375446 U2SURPO15042 1029 aaKnown RBP29.27■■■□□ 2.28
NINJ1-201ENST00000375446 HSP90AB1P08238 724 aaKnown RBP29.25■■■□□ 2.27
NINJ1-201ENST00000375446 SLC27A3Q5K4L6 730 aa29.25■■■□□ 2.27
NINJ1-201ENST00000375446 LRRC4BQ9NT99 713 aa29.25■■■□□ 2.27
NINJ1-201ENST00000375446 TOGARAM1Q9Y4F4 1720 aa29.25■■■□□ 2.27
NINJ1-201ENST00000375446 C1orf141Q5JVX7 400 aa29.24■■■□□ 2.27
NINJ1-201ENST00000375446 PIGBQ92521 554 aa29.23■■■□□ 2.27
NINJ1-201ENST00000375446 STK32BQ9NY57 414 aa29.23■■■□□ 2.27
NINJ1-201ENST00000375446 DCAF5Q96JK2 942 aa29.22■■■□□ 2.27
NINJ1-201ENST00000375446 TMOD3Q9NYL9 352 aa29.22■■■□□ 2.27
NINJ1-201ENST00000375446 NUDCQ9Y266 331 aa29.21■■■□□ 2.27
NINJ1-201ENST00000375446 SLC15A2Q16348 729 aa29.19■■■□□ 2.26
NINJ1-201ENST00000375446 CCNL1Q9UK58 526 aaPredicted RBP29.19■■■□□ 2.26
NINJ1-201ENST00000375446 SRCAPQ6ZRS2 3230 aa29.19■■■□□ 2.26
NINJ1-201ENST00000375446 PALLDQ8WX93 1383 aa29.18■■■□□ 2.26
NINJ1-201ENST00000375446 ERVV-2B6SEH9 535 aa29.18■■■□□ 2.26
NINJ1-201ENST00000375446 KCNQ4P56696 695 aa29.18■■■□□ 2.26
NINJ1-201ENST00000375446 RALBP1Q15311 655 aa29.18■■■□□ 2.26
NINJ1-201ENST00000375446 SMARCC1Q92922 1105 aaPredicted RBP29.18■■■□□ 2.26
NINJ1-201ENST00000375446 KDM6AO15550 1401 aaPredicted RBP29.18■■■□□ 2.26
NINJ1-201ENST00000375446 ITGB4P16144 1822 aa29.16■■■□□ 2.26
NINJ1-201ENST00000375446 AKAP4Q5JQC9 854 aa29.16■■■□□ 2.26
NINJ1-201ENST00000375446 PAPPAQ13219 1627 aa29.16■■■□□ 2.26
NINJ1-201ENST00000375446 MTHFSDQ2M296 383 aaKnown RBP29.15■■■□□ 2.26
NINJ1-201ENST00000375446 LY75O60449 1722 aa29.14■■■□□ 2.26
NINJ1-201ENST00000375446 U2AF1L5P0DN76 240 aaPredicted RBP29.14■■■□□ 2.26
NINJ1-201ENST00000375446 U2AF1Q01081 240 aaKnown RBP eCLIP29.14■■■□□ 2.26
NINJ1-201ENST00000375446 ZNF827Q17R98 1081 aa29.14■■■□□ 2.26
NINJ1-201ENST00000375446 CABP4P57796 275 aa29.13■■■□□ 2.25
NINJ1-201ENST00000375446 AKT1S1Q96B36 256 aa29.12■■■□□ 2.25
NINJ1-201ENST00000375446 RSPH6AQ9H0K4 717 aa29.12■■■□□ 2.25
NINJ1-201ENST00000375446 ASAP1Q9ULH1 1129 aa29.12■■■□□ 2.25
NINJ1-201ENST00000375446 ATG3Q9NT62 314 aa29.11■■■□□ 2.25
NINJ1-201ENST00000375446 PRKAR2BP31323 418 aa29.1■■■□□ 2.25
NINJ1-201ENST00000375446 PDGFDQ9GZP0 370 aaPredicted RBP29.1■■■□□ 2.25
NINJ1-201ENST00000375446 GAS2L2Q8NHY3 880 aa29.08■■■□□ 2.25
NINJ1-201ENST00000375446 LRP5O75197 1615 aa29.08■■■□□ 2.25
NINJ1-201ENST00000375446 ZNF316A6NFI3 1004 aaPredicted RBP29.07■■■□□ 2.24
NINJ1-201ENST00000375446 FCHSD2O94868 740 aa29.07■■■□□ 2.24
NINJ1-201ENST00000375446 HMGB2P26583 209 aaKnown RBP29.07■■■□□ 2.24
NINJ1-201ENST00000375446 LGR6Q9HBX8 967 aa29.07■■■□□ 2.24
NINJ1-201ENST00000375446 LOC102724428A0A0B4J2F2 783 aa29.06■■■□□ 2.24
NINJ1-201ENST00000375446 RNMTO43148 476 aaKnown RBP29.06■■■□□ 2.24
NINJ1-201ENST00000375446 SIK1P57059 783 aa29.06■■■□□ 2.24
NINJ1-201ENST00000375446 NFATC2IPQ8NCF5 419 aa29.06■■■□□ 2.24
NINJ1-201ENST00000375446 PHACTR3Q96KR7 559 aa29.06■■■□□ 2.24
NINJ1-201ENST00000375446 MYBBP1AQ9BQG0 1328 aaKnown RBP29.05■■■□□ 2.24
NINJ1-201ENST00000375446 TFCP2L1Q9NZI6 479 aa29.05■■■□□ 2.24
NINJ1-201ENST00000375446 SPON1Q9HCB6 807 aa29.04■■■□□ 2.24
NINJ1-201ENST00000375446 CASZ1Q86V15 1759 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms