RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 RBM26Q5T8P6 1007 aaKnown RBP17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 ZNHIT6Q9NWK9 470 aaKnown RBP17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 HIP1O00291 1037 aa17.38■□□□□ 0.37
NOTCH4-201ENST00000375023 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 TMOD2Q9NZR1 351 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 MCM10Q7L590 875 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 MINDY4BA8MYZ0 360 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 FGD6Q6ZV73 1430 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
NOTCH4-201ENST00000375023 PPFIA3O75145 1194 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 DRC1Q96MC2 740 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 RDXP35241 583 aaKnown RBP17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 MYO6Q9UM54 1294 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 CCDC191Q8NCU4 936 aa17.36■□□□□ 0.37
NOTCH4-201ENST00000375023 DNA2P51530 1060 aa17.35■□□□□ 0.37
NOTCH4-201ENST00000375023 RAPGEF3O95398 923 aa17.35■□□□□ 0.37
NOTCH4-201ENST00000375023 RABEP1Q15276 862 aa17.35■□□□□ 0.37
NOTCH4-201ENST00000375023 FERMT3Q86UX7 667 aa17.35■□□□□ 0.37
NOTCH4-201ENST00000375023 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 SPATA32Q96LK8 384 aa17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 ACSBG1Q96GR2 724 aa17.34■□□□□ 0.37
NOTCH4-201ENST00000375023 CCDC184Q52MB2 194 aa17.33■□□□□ 0.37
NOTCH4-201ENST00000375023 CRACR2BQ8N4Y2 399 aaPredicted RBP17.33■□□□□ 0.37
NOTCH4-201ENST00000375023 PDCP20941 246 aa17.33■□□□□ 0.37
NOTCH4-201ENST00000375023 CHD1LQ86WJ1 897 aa17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 GCC1Q96CN9 775 aa17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 MAP3K9P80192 1104 aa17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 BLOC1S2Q6QNY1 142 aa17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 ERCC4Q92889 916 aaPredicted RBP17.33■□□□□ 0.36
NOTCH4-201ENST00000375023 CCT4P50991 539 aaKnown RBP17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 UBA5Q9GZZ9 404 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 STIM1Q13586 685 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 METTL24Q5JXM2 366 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 CCDC192P0DO97 292 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 KLHL10Q6JEL2 608 aa17.32■□□□□ 0.36
NOTCH4-201ENST00000375023 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 MYD88Q99836 296 aa17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 BRD4O60885 1362 aaPredicted RBP17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
NOTCH4-201ENST00000375023 CEP126Q9P2H0 1117 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 TNNT1P13805 278 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 GOLGA6L10A6NI86 522 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 MBD3O95983 291 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 RTEL1-TNFRSF6BF6WH68 1400 aa17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
NOTCH4-201ENST00000375023 ERICH4A6NGS2 130 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 ERLIN2O94905 339 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 POLR3DP05423 398 aaPredicted RBP17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 THEMISQ8N1K5 641 aaPredicted RBP17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 KRT85P78386 507 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 LEKR1Q6ZMV7 388 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 JMYQ8N9B5 988 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 RAB11FIP4Q86YS3 637 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 CEP57L1Q8IYX8 460 aa17.29■□□□□ 0.36
NOTCH4-201ENST00000375023 FYCO1Q9BQS8 1478 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 KIAA1328Q86T90 577 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 EIF5P55010 431 aaKnown RBP17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 NCOA2Q15596 1464 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 F6X3S4 739 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 CEBPAP49715 358 aaPredicted RBP17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 MVPQ14764 893 aaKnown RBP17.28■□□□□ 0.36
NOTCH4-201ENST00000375023 CCDC8Q9H0W5 538 aaPredicted RBP17.27■□□□□ 0.36
NOTCH4-201ENST00000375023 KAT6BQ8WYB5 2073 aa17.27■□□□□ 0.35
NOTCH4-201ENST00000375023 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 KCNA4P22459 653 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 GPTP24298 496 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 CFTRP13569 1480 aa17.26■□□□□ 0.35
NOTCH4-201ENST00000375023 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms