RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 DIAPH1O60610 1272 aaKnown RBP28.32■■■□□ 2.12
MAP1LC3A-202ENST00000374837 PARD3Q8TEW0 1356 aa28.3■■■□□ 2.12
MAP1LC3A-202ENST00000374837 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
MAP1LC3A-202ENST00000374837 PSDA5PKW4 1024 aaPredicted RBP28.29■■■□□ 2.12
MAP1LC3A-202ENST00000374837 BAG6P46379 1132 aa28.29■■■□□ 2.12
MAP1LC3A-202ENST00000374837 PTF1AQ7RTS3 328 aa28.29■■■□□ 2.12
MAP1LC3A-202ENST00000374837 APBA3O96018 575 aa28.28■■■□□ 2.12
MAP1LC3A-202ENST00000374837 SULT6B1Q6IMI4 303 aa28.28■■■□□ 2.12
MAP1LC3A-202ENST00000374837 ACSBG1Q96GR2 724 aa28.27■■■□□ 2.12
MAP1LC3A-202ENST00000374837 BCL11BQ9C0K0 894 aaPredicted RBP28.27■■■□□ 2.12
MAP1LC3A-202ENST00000374837 LRP5O75197 1615 aa28.27■■■□□ 2.12
MAP1LC3A-202ENST00000374837 EN1Q05925 392 aaPredicted RBP28.26■■■□□ 2.11
MAP1LC3A-202ENST00000374837 CFAP53Q96M91 514 aa28.26■■■□□ 2.11
MAP1LC3A-202ENST00000374837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.26■■■□□ 2.11
MAP1LC3A-202ENST00000374837 SPG7Q9UQ90 795 aa28.26■■■□□ 2.11
MAP1LC3A-202ENST00000374837 KCNQ2O43526 872 aa28.25■■■□□ 2.11
MAP1LC3A-202ENST00000374837 RALBP1Q15311 655 aa28.25■■■□□ 2.11
MAP1LC3A-202ENST00000374837 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
MAP1LC3A-202ENST00000374837 PCDH11XQ9BZA7 1347 aa28.24■■■□□ 2.11
MAP1LC3A-202ENST00000374837 PCDH11YQ9BZA8 1340 aa28.24■■■□□ 2.11
MAP1LC3A-202ENST00000374837 CYP27B1O15528 508 aa28.24■■■□□ 2.11
MAP1LC3A-202ENST00000374837 KDRP35968 1356 aa28.22■■■□□ 2.11
MAP1LC3A-202ENST00000374837 HMOX1P09601 288 aa28.21■■■□□ 2.11
MAP1LC3A-202ENST00000374837 CAMKK2Q96RR4 588 aa28.21■■■□□ 2.11
MAP1LC3A-202ENST00000374837 RGPD1P0DJD0 1748 aa28.21■■■□□ 2.11
MAP1LC3A-202ENST00000374837 U2SURPO15042 1029 aaKnown RBP28.2■■■□□ 2.1
MAP1LC3A-202ENST00000374837 PLEKHO1Q53GL0 409 aaPredicted RBP28.2■■■□□ 2.1
MAP1LC3A-202ENST00000374837 EZH2Q15910 746 aaKnown RBP28.19■■■□□ 2.1
MAP1LC3A-202ENST00000374837 PLEKHG2Q9H7P9 1386 aa28.19■■■□□ 2.1
MAP1LC3A-202ENST00000374837 PRIM1P49642 420 aaKnown RBP28.17■■■□□ 2.1
MAP1LC3A-202ENST00000374837 AMOTQ4VCS5 1084 aa28.17■■■□□ 2.1
MAP1LC3A-202ENST00000374837 TNS1Q9HBL0 1735 aaKnown RBP28.17■■■□□ 2.1
MAP1LC3A-202ENST00000374837 SHANK3Q9BYB0 1731 aa28.16■■■□□ 2.1
MAP1LC3A-202ENST00000374837 PHKG2P15735 406 aa28.16■■■□□ 2.1
MAP1LC3A-202ENST00000374837 NKX1-1Q15270 411 aaPredicted RBP28.16■■■□□ 2.1
MAP1LC3A-202ENST00000374837 IFNL2Q8IZJ0 200 aa28.16■■■□□ 2.1
MAP1LC3A-202ENST00000374837 NUDCQ9Y266 331 aa28.16■■■□□ 2.1
MAP1LC3A-202ENST00000374837 PLSCR1O15162 318 aa28.15■■■□□ 2.1
MAP1LC3A-202ENST00000374837 SYTL4Q96C24 671 aaPredicted RBP28.14■■■□□ 2.1
MAP1LC3A-202ENST00000374837 SBF2Q86WG5 1849 aa28.13■■■□□ 2.09
MAP1LC3A-202ENST00000374837 PKD1L3Q7Z443 1732 aa28.13■■■□□ 2.09
MAP1LC3A-202ENST00000374837 ZNF530Q6P9A1 599 aaPredicted RBP28.13■■■□□ 2.09
MAP1LC3A-202ENST00000374837 PRKRIP1Q9H875 184 aaPredicted RBP28.13■■■□□ 2.09
MAP1LC3A-202ENST00000374837 MYBBP1AQ9BQG0 1328 aaKnown RBP28.12■■■□□ 2.09
MAP1LC3A-202ENST00000374837 U2AF1L5P0DN76 240 aaPredicted RBP28.09■■■□□ 2.09
MAP1LC3A-202ENST00000374837 U2AF1Q01081 240 aaKnown RBP eCLIP28.09■■■□□ 2.09
MAP1LC3A-202ENST00000374837 R3HDM1Q15032 1099 aaKnown RBP28.09■■■□□ 2.09
MAP1LC3A-202ENST00000374837 NHSQ6T4R5 1651 aa28.08■■■□□ 2.09
MAP1LC3A-202ENST00000374837 PROM2Q8N271 834 aa28.08■■■□□ 2.09
MAP1LC3A-202ENST00000374837 HSP90AB1P08238 724 aaKnown RBP28.06■■■□□ 2.08
MAP1LC3A-202ENST00000374837 MTHFSDQ2M296 383 aaKnown RBP28.06■■■□□ 2.08
MAP1LC3A-202ENST00000374837 C1orf141Q5JVX7 400 aa28.06■■■□□ 2.08
MAP1LC3A-202ENST00000374837 RSPH6AQ9H0K4 717 aa28.06■■■□□ 2.08
MAP1LC3A-202ENST00000374837 MPRIPQ6WCQ1 1025 aa28.05■■■□□ 2.08
MAP1LC3A-202ENST00000374837 PRKAR2BP31323 418 aa28.04■■■□□ 2.08
MAP1LC3A-202ENST00000374837 TXNRD1Q16881 649 aa28.04■■■□□ 2.08
MAP1LC3A-202ENST00000374837 DCAF5Q96JK2 942 aa28.04■■■□□ 2.08
MAP1LC3A-202ENST00000374837 FCHSD2O94868 740 aa28.03■■■□□ 2.08
MAP1LC3A-202ENST00000374837 AKAP4Q5JQC9 854 aa28.02■■■□□ 2.08
MAP1LC3A-202ENST00000374837 PIGBQ92521 554 aa28.02■■■□□ 2.08
MAP1LC3A-202ENST00000374837 PHACTR3Q96KR7 559 aa28.01■■■□□ 2.07
MAP1LC3A-202ENST00000374837 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
MAP1LC3A-202ENST00000374837 ERVV-2B6SEH9 535 aa27.99■■■□□ 2.07
MAP1LC3A-202ENST00000374837 TMOD3Q9NYL9 352 aa27.99■■■□□ 2.07
MAP1LC3A-202ENST00000374837 KDM6AO15550 1401 aaPredicted RBP27.98■■■□□ 2.07
MAP1LC3A-202ENST00000374837 KAT6BQ8WYB5 2073 aa27.98■■■□□ 2.07
MAP1LC3A-202ENST00000374837 GAS2L2Q8NHY3 880 aa27.97■■■□□ 2.07
MAP1LC3A-202ENST00000374837 BTAF1O14981 1849 aa27.97■■■□□ 2.07
MAP1LC3A-202ENST00000374837 LGR6Q9HBX8 967 aa27.96■■■□□ 2.07
MAP1LC3A-202ENST00000374837 TOGARAM1Q9Y4F4 1720 aa27.95■■■□□ 2.07
MAP1LC3A-202ENST00000374837 NBPF14Q5TI25 921 aa27.95■■■□□ 2.06
MAP1LC3A-202ENST00000374837 CABP4P57796 275 aa27.94■■■□□ 2.06
MAP1LC3A-202ENST00000374837 LRRC4BQ9NT99 713 aa27.94■■■□□ 2.06
MAP1LC3A-202ENST00000374837 RNMTO43148 476 aaKnown RBP27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 ANP32CO43423 234 aa27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 SMARCC1Q92922 1105 aaPredicted RBP27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 RREB1Q92766 1687 aa27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 RGPD3A6NKT7 1758 aaPredicted RBP27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 RGPD4Q7Z3J3 1758 aa27.93■■■□□ 2.06
MAP1LC3A-202ENST00000374837 SLC27A3Q5K4L6 730 aa27.92■■■□□ 2.06
MAP1LC3A-202ENST00000374837 KCNQ4P56696 695 aa27.91■■■□□ 2.06
MAP1LC3A-202ENST00000374837 NFATC2IPQ8NCF5 419 aa27.91■■■□□ 2.06
MAP1LC3A-202ENST00000374837 PLEKHF1Q96S99 279 aa27.91■■■□□ 2.06
MAP1LC3A-202ENST00000374837 ANO8Q9HCE9 1232 aaPredicted RBP27.91■■■□□ 2.06
MAP1LC3A-202ENST00000374837 ASAP1Q9ULH1 1129 aa27.91■■■□□ 2.06
MAP1LC3A-202ENST00000374837 PALLDQ8WX93 1383 aa27.9■■■□□ 2.06
MAP1LC3A-202ENST00000374837 GNAT3A8MTJ3 354 aa27.9■■■□□ 2.06
MAP1LC3A-202ENST00000374837 ATG3Q9NT62 314 aa27.9■■■□□ 2.06
MAP1LC3A-202ENST00000374837 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
MAP1LC3A-202ENST00000374837 MAP3K5Q99683 1374 aa27.88■■■□□ 2.05
MAP1LC3A-202ENST00000374837 NUP188Q5SRE5 1749 aa27.88■■■□□ 2.05
MAP1LC3A-202ENST00000374837 PNNQ9H307 717 aaKnown RBP27.88■■■□□ 2.05
MAP1LC3A-202ENST00000374837 YY1P25490 414 aa27.87■■■□□ 2.05
MAP1LC3A-202ENST00000374837 IL17REQ8NFR9 667 aa27.87■■■□□ 2.05
MAP1LC3A-202ENST00000374837 SLC52A2Q9HAB3 445 aa27.87■■■□□ 2.05
MAP1LC3A-202ENST00000374837 NEFMP07197 916 aa27.86■■■□□ 2.05
MAP1LC3A-202ENST00000374837 CCDC184Q52MB2 194 aa27.86■■■□□ 2.05
MAP1LC3A-202ENST00000374837 ITGB4P16144 1822 aa27.85■■■□□ 2.05
MAP1LC3A-202ENST00000374837 WDR43Q15061 677 aaKnown RBP eCLIP27.85■■■□□ 2.05
MAP1LC3A-202ENST00000374837 STK32BQ9NY57 414 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms