RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PRICKLE2Q7Z3G6 844 aa9.9□□□□□ -0.82
PMS1-202ENST00000374826 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
PMS1-202ENST00000374826 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
PMS1-202ENST00000374826 ZBBXA8MT70 800 aa9.89□□□□□ -0.83
PMS1-202ENST00000374826 ADAMTS2O95450 1211 aa9.88□□□□□ -0.83
PMS1-202ENST00000374826 SUZ12Q15022 739 aaKnown RBP9.88□□□□□ -0.83
PMS1-202ENST00000374826 ATP5J2-PTCD1G3V325 749 aa9.87□□□□□ -0.83
PMS1-202ENST00000374826 SRSF11Q05519 484 aaKnown RBP9.87□□□□□ -0.83
PMS1-202ENST00000374826 LYPD4Q6UWN0 246 aa9.87□□□□□ -0.83
PMS1-202ENST00000374826 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
PMS1-202ENST00000374826 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
PMS1-202ENST00000374826 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
PMS1-202ENST00000374826 RHOQP17081 205 aa9.86□□□□□ -0.83
PMS1-202ENST00000374826 MARSP56192 900 aaKnown RBP9.86□□□□□ -0.83
PMS1-202ENST00000374826 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
PMS1-202ENST00000374826 A0A1W2PRU2 124 aa9.85□□□□□ -0.83
PMS1-202ENST00000374826 GPC1P35052 558 aa9.85□□□□□ -0.83
PMS1-202ENST00000374826 GAS6Q14393 721 aa9.85□□□□□ -0.83
PMS1-202ENST00000374826 GMCL1Q96IK5 515 aa9.85□□□□□ -0.83
PMS1-202ENST00000374826 IRS1P35568 1242 aa9.84□□□□□ -0.83
PMS1-202ENST00000374826 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
PMS1-202ENST00000374826 MEN1O00255 615 aa9.83□□□□□ -0.84
PMS1-202ENST00000374826 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
PMS1-202ENST00000374826 NEUROD2Q15784 382 aa9.83□□□□□ -0.84
PMS1-202ENST00000374826 DBN1Q16643 649 aa9.83□□□□□ -0.84
PMS1-202ENST00000374826 RNF20Q5VTR2 975 aa9.83□□□□□ -0.84
PMS1-202ENST00000374826 CELA2BP08218 269 aaPredicted RBP9.82□□□□□ -0.84
PMS1-202ENST00000374826 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
PMS1-202ENST00000374826 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
PMS1-202ENST00000374826 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
PMS1-202ENST00000374826 SCARF2Q96GP6 870 aaPredicted RBP9.82□□□□□ -0.84
PMS1-202ENST00000374826 POU4F2Q12837 409 aa9.81□□□□□ -0.84
PMS1-202ENST00000374826 ZNF837Q96EG3 531 aaPredicted RBP9.81□□□□□ -0.84
PMS1-202ENST00000374826 DYRK1BQ9Y463 629 aa9.81□□□□□ -0.84
PMS1-202ENST00000374826 MAP3K10Q02779 954 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 KANK3Q6NY19 840 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 FOXR1Q6PIV2 292 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 RIPOR1Q6ZS17 1223 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 NLRP3Q96P20 1036 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 GRIP2Q9C0E4 1043 aa9.8□□□□□ -0.84
PMS1-202ENST00000374826 ENAMQ9NRM1 1142 aa9.79□□□□□ -0.84
PMS1-202ENST00000374826 MBIPQ9NS73 344 aa9.79□□□□□ -0.84
PMS1-202ENST00000374826 DNMT3AQ9Y6K1 912 aaPredicted RBP9.79□□□□□ -0.84
PMS1-202ENST00000374826 H7C1W4 665 aa9.78□□□□□ -0.84
PMS1-202ENST00000374826 GPR25O00155 361 aa9.78□□□□□ -0.84
PMS1-202ENST00000374826 NR1H3Q13133 447 aa9.78□□□□□ -0.84
PMS1-202ENST00000374826 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
PMS1-202ENST00000374826 SCTRP47872 440 aa9.77□□□□□ -0.85
PMS1-202ENST00000374826 BRPF1P55201 1214 aaPredicted RBP9.77□□□□□ -0.85
PMS1-202ENST00000374826 CLN3Q13286 438 aa9.77□□□□□ -0.85
PMS1-202ENST00000374826 GAS2L1Q99501 681 aaPredicted RBP9.77□□□□□ -0.85
PMS1-202ENST00000374826 IGF1RP08069 1367 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 WDR44Q5JSH3 913 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 GPAT2Q6NUI2 795 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 NBPF10Q6P3W6 841 aaKnown RBP9.76□□□□□ -0.85
PMS1-202ENST00000374826 CYP2U1Q7Z449 544 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 NBPF15Q8N660 670 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 ZNF592Q92610 1267 aa9.76□□□□□ -0.85
PMS1-202ENST00000374826 GTPBP3Q969Y2 492 aaKnown RBP9.76□□□□□ -0.85
PMS1-202ENST00000374826 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 TRAK2O60296 914 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 IGHA1P01876 353 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 ZNF330Q9Y3S2 320 aaPredicted RBP9.75□□□□□ -0.85
PMS1-202ENST00000374826 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
PMS1-202ENST00000374826 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
PMS1-202ENST00000374826 BCRP11274 1271 aa9.73□□□□□ -0.85
PMS1-202ENST00000374826 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
PMS1-202ENST00000374826 FOXK2Q01167 660 aa9.73□□□□□ -0.85
PMS1-202ENST00000374826 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
PMS1-202ENST00000374826 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
PMS1-202ENST00000374826 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
PMS1-202ENST00000374826 CNTNAP5Q8WYK1 1306 aa9.72□□□□□ -0.85
PMS1-202ENST00000374826 SOCS7O14512 581 aa9.71□□□□□ -0.86
PMS1-202ENST00000374826 GPR37L1O60883 481 aa9.71□□□□□ -0.86
PMS1-202ENST00000374826 F11P03951 625 aa9.71□□□□□ -0.86
PMS1-202ENST00000374826 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
PMS1-202ENST00000374826 BEND7Q8N7W2 519 aaPredicted RBP9.71□□□□□ -0.86
PMS1-202ENST00000374826 ACDQ96AP0 544 aa9.71□□□□□ -0.86
PMS1-202ENST00000374826 GNRH1P01148 92 aa9.7□□□□□ -0.86
PMS1-202ENST00000374826 MTMR14Q8NCE2 650 aa9.7□□□□□ -0.86
PMS1-202ENST00000374826 PHF20L1A8MW92 1017 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 WASLO00401 505 aaPredicted RBP9.69□□□□□ -0.86
PMS1-202ENST00000374826 MX2P20592 715 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 CENPCQ03188 943 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 NEDD1Q8NHV4 660 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 CNKSR1Q969H4 720 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 ESYT1Q9BSJ8 1104 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
PMS1-202ENST00000374826 NUCKS1Q9H1E3 243 aaKnown RBP9.68□□□□□ -0.86
PMS1-202ENST00000374826 SNRKQ9NRH2 765 aa9.68□□□□□ -0.86
PMS1-202ENST00000374826 RAB6BQ9NRW1 208 aa9.68□□□□□ -0.86
PMS1-202ENST00000374826 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
PMS1-202ENST00000374826 IL2RAP01589 272 aa9.67□□□□□ -0.86
PMS1-202ENST00000374826 XAGE2Q96GT9 111 aa9.66□□□□□ -0.86
PMS1-202ENST00000374826 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
PMS1-202ENST00000374826 CDCA7Q9BWT1 371 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms