RNA–Protein interactions for RNA: ENST00000374484.8

CUTA-201, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 3

Gene CUTA, Length 658 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-201ENST00000374484 PTF1AQ7RTS3 328 aa18.73■□□□□ 0.59
CUTA-201ENST00000374484 LY75O60449 1722 aa18.73■□□□□ 0.59
CUTA-201ENST00000374484 ITGB4P16144 1822 aa18.72■□□□□ 0.59
CUTA-201ENST00000374484 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
CUTA-201ENST00000374484 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
CUTA-201ENST00000374484 KNSTRNQ9Y448 316 aa18.71■□□□□ 0.59
CUTA-201ENST00000374484 PAPPAQ13219 1627 aa18.71■□□□□ 0.58
CUTA-201ENST00000374484 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
CUTA-201ENST00000374484 CASZ1Q86V15 1759 aa18.69■□□□□ 0.58
CUTA-201ENST00000374484 KCNQ2O43526 872 aa18.69■□□□□ 0.58
CUTA-201ENST00000374484 RAPGEF4Q8WZA2 1011 aa18.69■□□□□ 0.58
CUTA-201ENST00000374484 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
CUTA-201ENST00000374484 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
CUTA-201ENST00000374484 NPC1L1Q9UHC9 1359 aa18.68■□□□□ 0.58
CUTA-201ENST00000374484 PROM2Q8N271 834 aa18.68■□□□□ 0.58
CUTA-201ENST00000374484 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
CUTA-201ENST00000374484 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
CUTA-201ENST00000374484 PSDA5PKW4 1024 aaPredicted RBP18.66■□□□□ 0.58
CUTA-201ENST00000374484 R3HDM1Q15032 1099 aaKnown RBP18.66■□□□□ 0.58
CUTA-201ENST00000374484 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
CUTA-201ENST00000374484 PCDH11XQ9BZA7 1347 aa18.66■□□□□ 0.58
CUTA-201ENST00000374484 PCDH11YQ9BZA8 1340 aa18.66■□□□□ 0.58
CUTA-201ENST00000374484 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
CUTA-201ENST00000374484 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
CUTA-201ENST00000374484 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
CUTA-201ENST00000374484 EYA1Q99502 592 aa18.65■□□□□ 0.58
CUTA-201ENST00000374484 EIF4A2Q14240 407 aaKnown RBP18.64■□□□□ 0.57
CUTA-201ENST00000374484 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
CUTA-201ENST00000374484 ACSBG1Q96GR2 724 aa18.64■□□□□ 0.57
CUTA-201ENST00000374484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.64■□□□□ 0.57
CUTA-201ENST00000374484 IGSF1Q8N6C5 1336 aa18.64■□□□□ 0.57
CUTA-201ENST00000374484 TNNT2P45379 298 aaPredicted RBP18.63■□□□□ 0.57
CUTA-201ENST00000374484 TAF1LQ8IZX4 1826 aa18.63■□□□□ 0.57
CUTA-201ENST00000374484 TUBGCP6Q96RT7 1819 aa18.61■□□□□ 0.57
CUTA-201ENST00000374484 CYP27B1O15528 508 aa18.61■□□□□ 0.57
CUTA-201ENST00000374484 VIRMAQ69YN4 1812 aaKnown RBP18.6■□□□□ 0.57
CUTA-201ENST00000374484 NKX1-1Q15270 411 aaPredicted RBP18.6■□□□□ 0.57
CUTA-201ENST00000374484 KDRP35968 1356 aa18.59■□□□□ 0.57
CUTA-201ENST00000374484 ANO8Q9HCE9 1232 aaPredicted RBP18.59■□□□□ 0.57
CUTA-201ENST00000374484 COL24A1Q17RW2 1714 aa18.58■□□□□ 0.57
CUTA-201ENST00000374484 PRIM1P49642 420 aaKnown RBP18.58■□□□□ 0.56
CUTA-201ENST00000374484 SPG7Q9UQ90 795 aa18.58■□□□□ 0.56
CUTA-201ENST00000374484 C5P01031 1676 aa18.57■□□□□ 0.56
CUTA-201ENST00000374484 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
CUTA-201ENST00000374484 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
CUTA-201ENST00000374484 ZNF831Q5JPB2 1677 aa18.55■□□□□ 0.56
CUTA-201ENST00000374484 SLC15A2Q16348 729 aa18.55■□□□□ 0.56
CUTA-201ENST00000374484 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
CUTA-201ENST00000374484 IL13P35225 146 aa18.54■□□□□ 0.56
CUTA-201ENST00000374484 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
CUTA-201ENST00000374484 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
CUTA-201ENST00000374484 STK32BQ9NY57 414 aa18.53■□□□□ 0.56
CUTA-201ENST00000374484 PHKG2P15735 406 aa18.52■□□□□ 0.56
CUTA-201ENST00000374484 MTHFSP49914 203 aa18.52■□□□□ 0.56
CUTA-201ENST00000374484 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
CUTA-201ENST00000374484 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
CUTA-201ENST00000374484 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
CUTA-201ENST00000374484 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
CUTA-201ENST00000374484 AKT1S1Q96B36 256 aa18.5■□□□□ 0.55
CUTA-201ENST00000374484 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
CUTA-201ENST00000374484 SPON1Q9HCB6 807 aa18.49■□□□□ 0.55
CUTA-201ENST00000374484 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
CUTA-201ENST00000374484 PLEKHO1Q53GL0 409 aaPredicted RBP18.48■□□□□ 0.55
CUTA-201ENST00000374484 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
CUTA-201ENST00000374484 C4BP0C0L5 1744 aa18.47■□□□□ 0.55
CUTA-201ENST00000374484 ZNF827Q17R98 1081 aa18.47■□□□□ 0.55
CUTA-201ENST00000374484 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
CUTA-201ENST00000374484 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
CUTA-201ENST00000374484 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
CUTA-201ENST00000374484 SULT6B1Q6IMI4 303 aa18.46■□□□□ 0.55
CUTA-201ENST00000374484 MPRIPQ6WCQ1 1025 aa18.46■□□□□ 0.55
CUTA-201ENST00000374484 PIGBQ92521 554 aa18.46■□□□□ 0.55
CUTA-201ENST00000374484 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
CUTA-201ENST00000374484 DCAF5Q96JK2 942 aa18.46■□□□□ 0.55
CUTA-201ENST00000374484 PDGFDQ9GZP0 370 aaPredicted RBP18.46■□□□□ 0.55
CUTA-201ENST00000374484 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
CUTA-201ENST00000374484 COL5A3P25940 1745 aaPredicted RBP18.46■□□□□ 0.55
CUTA-201ENST00000374484 ERVV-2B6SEH9 535 aa18.45■□□□□ 0.54
CUTA-201ENST00000374484 DIAPH1O60610 1272 aaKnown RBP18.45■□□□□ 0.54
CUTA-201ENST00000374484 CCNL1Q9UK58 526 aaPredicted RBP18.45■□□□□ 0.54
CUTA-201ENST00000374484 MTFR1LQ9H019 292 aa18.43■□□□□ 0.54
CUTA-201ENST00000374484 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
CUTA-201ENST00000374484 MRC1P22897 1456 aa18.42■□□□□ 0.54
CUTA-201ENST00000374484 PTGER2P43116 358 aa18.42■□□□□ 0.54
CUTA-201ENST00000374484 ZNF530Q6P9A1 599 aaPredicted RBP18.42■□□□□ 0.54
CUTA-201ENST00000374484 SLC16A10Q8TF71 515 aa18.42■□□□□ 0.54
CUTA-201ENST00000374484 SGIP1Q9BQI5 828 aa18.42■□□□□ 0.54
CUTA-201ENST00000374484 PNPLA7Q6ZV29 1317 aa18.42■□□□□ 0.54
CUTA-201ENST00000374484 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
CUTA-201ENST00000374484 KCNQ4P56696 695 aa18.4■□□□□ 0.54
CUTA-201ENST00000374484 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
CUTA-201ENST00000374484 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
CUTA-201ENST00000374484 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
CUTA-201ENST00000374484 AKAP4Q5JQC9 854 aa18.38■□□□□ 0.53
CUTA-201ENST00000374484 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
CUTA-201ENST00000374484 ASAP1Q9ULH1 1129 aa18.38■□□□□ 0.53
CUTA-201ENST00000374484 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
CUTA-201ENST00000374484 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
CUTA-201ENST00000374484 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
CUTA-201ENST00000374484 SIK1P57059 783 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms