RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
SNX30-201ENST00000374232 PUS7Q96PZ0 661 aaKnown RBP17.09■□□□□ 0.33
SNX30-201ENST00000374232 EIF5P55010 431 aaKnown RBP17.09■□□□□ 0.33
SNX30-201ENST00000374232 CFAP100Q494V2 611 aa17.09■□□□□ 0.33
SNX30-201ENST00000374232 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.33
SNX30-201ENST00000374232 SRGAP3O43295 1099 aa17.08■□□□□ 0.33
SNX30-201ENST00000374232 UBE4AQ14139 1066 aa17.08■□□□□ 0.33
SNX30-201ENST00000374232 BAZ1AQ9NRL2 1556 aaPredicted RBP17.08■□□□□ 0.33
SNX30-201ENST00000374232 GNL3LQ9NVN8 582 aaKnown RBP17.08■□□□□ 0.33
SNX30-201ENST00000374232 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
SNX30-201ENST00000374232 MACROD2A1Z1Q3 448 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
SNX30-201ENST00000374232 RABEP1Q15276 862 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 PODXL2Q9NZ53 605 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 CHD1LQ86WJ1 897 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 MBD3O95983 291 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
SNX30-201ENST00000374232 GNAI3P08754 354 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
SNX30-201ENST00000374232 SCLT1Q96NL6 688 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
SNX30-201ENST00000374232 EZRP15311 586 aaKnown RBP17.06■□□□□ 0.32
SNX30-201ENST00000374232 CCDC57Q2TAC2 916 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX30-201ENST00000374232 CKAP2LQ8IYA6 745 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 NUP62CLQ9H1M0 184 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 KRT85P78386 507 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 CCDC178Q5BJE1 867 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
SNX30-201ENST00000374232 ANAPC15P60006 121 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
SNX30-201ENST00000374232 IPO4Q8TEX9 1081 aaKnown RBP17.05■□□□□ 0.32
SNX30-201ENST00000374232 BIN1O00499 593 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 PLCD3Q8N3E9 789 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 NF2P35240 595 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
SNX30-201ENST00000374232 SPTY2D1Q68D10 685 aaPredicted RBP17.05■□□□□ 0.32
SNX30-201ENST00000374232 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 DYDC1Q8WWB3 177 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 MMRN2Q9H8L6 949 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 CDK19Q9BWU1 502 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
SNX30-201ENST00000374232 CCT2P78371 535 aaKnown RBP17.04■□□□□ 0.32
SNX30-201ENST00000374232 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
SNX30-201ENST00000374232 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
SNX30-201ENST00000374232 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
SNX30-201ENST00000374232 RNF187Q5TA31 235 aaPredicted RBP17.03■□□□□ 0.32
SNX30-201ENST00000374232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX30-201ENST00000374232 LUC7LQ9NQ29 371 aaKnown RBP17.03■□□□□ 0.32
SNX30-201ENST00000374232 ATP2C2O75185 946 aa17.03■□□□□ 0.32
SNX30-201ENST00000374232 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
SNX30-201ENST00000374232 MCM10Q7L590 875 aa17.03■□□□□ 0.32
SNX30-201ENST00000374232 UBAC1Q9BSL1 405 aa17.03■□□□□ 0.32
SNX30-201ENST00000374232 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
SNX30-201ENST00000374232 ZNF530Q6P9A1 599 aaPredicted RBP17.02■□□□□ 0.32
SNX30-201ENST00000374232 TMEM87AQ8NBN3 555 aa17.02■□□□□ 0.32
SNX30-201ENST00000374232 URI1O94763 535 aaPredicted RBP17.02■□□□□ 0.32
SNX30-201ENST00000374232 C20orf194Q5TEA3 1177 aa17.02■□□□□ 0.32
SNX30-201ENST00000374232 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
SNX30-201ENST00000374232 PDCP20941 246 aa17.02■□□□□ 0.32
SNX30-201ENST00000374232 PDCL2Q8N4E4 241 aa17.02■□□□□ 0.32
SNX30-201ENST00000374232 MAP2K1Q02750 393 aaPredicted RBP17.02■□□□□ 0.31
SNX30-201ENST00000374232 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.31
SNX30-201ENST00000374232 ZNF830Q96NB3 372 aaPredicted RBP17.02■□□□□ 0.31
SNX30-201ENST00000374232 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.31
SNX30-201ENST00000374232 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.31
SNX30-201ENST00000374232 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
SNX30-201ENST00000374232 CASQ1P31415 396 aa17.01■□□□□ 0.31
SNX30-201ENST00000374232 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
SNX30-201ENST00000374232 CCP110O43303 1012 aa17.01■□□□□ 0.31
SNX30-201ENST00000374232 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
SNX30-201ENST00000374232 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
SNX30-201ENST00000374232 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
SNX30-201ENST00000374232 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
SNX30-201ENST00000374232 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
SNX30-201ENST00000374232 TMCO3Q6UWJ1 677 aa17■□□□□ 0.31
SNX30-201ENST00000374232 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
SNX30-201ENST00000374232 F6X3S4 739 aa17■□□□□ 0.31
SNX30-201ENST00000374232 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
SNX30-201ENST00000374232 ARHGAP29Q52LW3 1261 aa17■□□□□ 0.31
SNX30-201ENST00000374232 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
SNX30-201ENST00000374232 CA8P35219 290 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 JMYQ8N9B5 988 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 FAM107BQ9H098 131 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 SMARCA2P51531 1590 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 DESP17661 470 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 HIP1O00291 1037 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 GAS2L2Q8NHY3 880 aa16.99■□□□□ 0.31
SNX30-201ENST00000374232 TFIP11Q9UBB9 837 aaKnown RBP16.99■□□□□ 0.31
SNX30-201ENST00000374232 VAT1LQ9HCJ6 419 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms