RNA–Protein interactions for RNA: ENST00000374078.5

ROMO1-204, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROMO1, Length 498 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-204ENST00000374078 IGSF1Q8N6C5 1336 aa24.32■■□□□ 1.48
ROMO1-204ENST00000374078 APBA3O96018 575 aa24.31■■□□□ 1.48
ROMO1-204ENST00000374078 CFAP53Q96M91 514 aa24.31■■□□□ 1.48
ROMO1-204ENST00000374078 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
ROMO1-204ENST00000374078 PCDH11XQ9BZA7 1347 aa24.31■■□□□ 1.48
ROMO1-204ENST00000374078 PCDH11YQ9BZA8 1340 aa24.31■■□□□ 1.48
ROMO1-204ENST00000374078 PKD1L3Q7Z443 1732 aa24.3■■□□□ 1.48
ROMO1-204ENST00000374078 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
ROMO1-204ENST00000374078 SPG7Q9UQ90 795 aa24.29■■□□□ 1.48
ROMO1-204ENST00000374078 IL13P35225 146 aa24.28■■□□□ 1.48
ROMO1-204ENST00000374078 BCL11BQ9C0K0 894 aaPredicted RBP24.28■■□□□ 1.48
ROMO1-204ENST00000374078 NHSQ6T4R5 1651 aa24.27■■□□□ 1.48
ROMO1-204ENST00000374078 EN1Q05925 392 aaPredicted RBP24.27■■□□□ 1.48
ROMO1-204ENST00000374078 PPP2R1AP30153 589 aa24.26■■□□□ 1.47
ROMO1-204ENST00000374078 ACSBG1Q96GR2 724 aa24.26■■□□□ 1.47
ROMO1-204ENST00000374078 PLEKHG2Q9H7P9 1386 aa24.26■■□□□ 1.47
ROMO1-204ENST00000374078 SULT6B1Q6IMI4 303 aa24.25■■□□□ 1.47
ROMO1-204ENST00000374078 DOT1LQ8TEK3 1739 aa24.24■■□□□ 1.47
ROMO1-204ENST00000374078 ZNF316A6NFI3 1004 aaPredicted RBP24.24■■□□□ 1.47
ROMO1-204ENST00000374078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.24■■□□□ 1.47
ROMO1-204ENST00000374078 PARD3Q8TEW0 1356 aa24.24■■□□□ 1.47
ROMO1-204ENST00000374078 SYTL4Q96C24 671 aaPredicted RBP24.22■■□□□ 1.47
ROMO1-204ENST00000374078 RGPD3A6NKT7 1758 aaPredicted RBP24.21■■□□□ 1.47
ROMO1-204ENST00000374078 RGPD4Q7Z3J3 1758 aa24.21■■□□□ 1.47
ROMO1-204ENST00000374078 COL3A1P02461 1466 aaPredicted RBP24.21■■□□□ 1.47
ROMO1-204ENST00000374078 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
ROMO1-204ENST00000374078 RALBP1Q15311 655 aa24.21■■□□□ 1.47
ROMO1-204ENST00000374078 PLEKHO1Q53GL0 409 aaPredicted RBP24.21■■□□□ 1.47
ROMO1-204ENST00000374078 AEBP1Q8IUX7 1158 aa24.21■■□□□ 1.47
ROMO1-204ENST00000374078 KDRP35968 1356 aa24.2■■□□□ 1.46
ROMO1-204ENST00000374078 AMOTQ4VCS5 1084 aa24.2■■□□□ 1.46
ROMO1-204ENST00000374078 NUDCQ9Y266 331 aa24.2■■□□□ 1.46
ROMO1-204ENST00000374078 BTAF1O14981 1849 aa24.19■■□□□ 1.46
ROMO1-204ENST00000374078 KCNQ2O43526 872 aa24.19■■□□□ 1.46
ROMO1-204ENST00000374078 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
ROMO1-204ENST00000374078 CYP27B1O15528 508 aa24.18■■□□□ 1.46
ROMO1-204ENST00000374078 HMOX1P09601 288 aa24.18■■□□□ 1.46
ROMO1-204ENST00000374078 PTF1AQ7RTS3 328 aa24.18■■□□□ 1.46
ROMO1-204ENST00000374078 IFNL2Q8IZJ0 200 aa24.18■■□□□ 1.46
ROMO1-204ENST00000374078 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
ROMO1-204ENST00000374078 PLSCR1O15162 318 aa24.17■■□□□ 1.46
ROMO1-204ENST00000374078 PRIM1P49642 420 aaKnown RBP24.16■■□□□ 1.46
ROMO1-204ENST00000374078 RREB1Q92766 1687 aa24.15■■□□□ 1.46
ROMO1-204ENST00000374078 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
ROMO1-204ENST00000374078 ZNF530Q6P9A1 599 aaPredicted RBP24.15■■□□□ 1.46
ROMO1-204ENST00000374078 PHKG2P15735 406 aa24.14■■□□□ 1.45
ROMO1-204ENST00000374078 HSP90AB1P08238 724 aaKnown RBP24.13■■□□□ 1.45
ROMO1-204ENST00000374078 NKX1-1Q15270 411 aaPredicted RBP24.12■■□□□ 1.45
ROMO1-204ENST00000374078 NUP188Q5SRE5 1749 aa24.12■■□□□ 1.45
ROMO1-204ENST00000374078 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
ROMO1-204ENST00000374078 TOGARAM1Q9Y4F4 1720 aa24.11■■□□□ 1.45
ROMO1-204ENST00000374078 ITGB4P16144 1822 aa24.11■■□□□ 1.45
ROMO1-204ENST00000374078 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
ROMO1-204ENST00000374078 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
ROMO1-204ENST00000374078 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
ROMO1-204ENST00000374078 MPRIPQ6WCQ1 1025 aa24.09■■□□□ 1.45
ROMO1-204ENST00000374078 DCAF5Q96JK2 942 aa24.08■■□□□ 1.45
ROMO1-204ENST00000374078 TXNRD1Q16881 649 aa24.07■■□□□ 1.44
ROMO1-204ENST00000374078 TMOD3Q9NYL9 352 aa24.07■■□□□ 1.44
ROMO1-204ENST00000374078 PRKRIP1Q9H875 184 aaPredicted RBP24.05■■□□□ 1.44
ROMO1-204ENST00000374078 AKAP4Q5JQC9 854 aa24.04■■□□□ 1.44
ROMO1-204ENST00000374078 NEFMP07197 916 aa24.03■■□□□ 1.44
ROMO1-204ENST00000374078 PRKAR2BP31323 418 aa24.03■■□□□ 1.44
ROMO1-204ENST00000374078 GAS2L2Q8NHY3 880 aa24.03■■□□□ 1.44
ROMO1-204ENST00000374078 ERVV-2B6SEH9 535 aa24.02■■□□□ 1.44
ROMO1-204ENST00000374078 FCHSD2O94868 740 aa24.02■■□□□ 1.44
ROMO1-204ENST00000374078 SLC27A3Q5K4L6 730 aa24.02■■□□□ 1.44
ROMO1-204ENST00000374078 SMARCC1Q92922 1105 aaPredicted RBP24.02■■□□□ 1.44
ROMO1-204ENST00000374078 RSPH6AQ9H0K4 717 aa24.02■■□□□ 1.44
ROMO1-204ENST00000374078 LY75O60449 1722 aa24.01■■□□□ 1.43
ROMO1-204ENST00000374078 PSDA5PKW4 1024 aaPredicted RBP24.01■■□□□ 1.43
ROMO1-204ENST00000374078 MTHFSDQ2M296 383 aaKnown RBP24.01■■□□□ 1.43
ROMO1-204ENST00000374078 PROM2Q8N271 834 aa24.01■■□□□ 1.43
ROMO1-204ENST00000374078 PIGBQ92521 554 aa24.01■■□□□ 1.43
ROMO1-204ENST00000374078 SCN11AQ9UI33 1791 aa24.01■■□□□ 1.43
ROMO1-204ENST00000374078 KDM6AO15550 1401 aaPredicted RBP24.01■■□□□ 1.43
ROMO1-204ENST00000374078 VIRMAQ69YN4 1812 aaKnown RBP24■■□□□ 1.43
ROMO1-204ENST00000374078 CABP4P57796 275 aa24■■□□□ 1.43
ROMO1-204ENST00000374078 R3HDM1Q15032 1099 aaKnown RBP24■■□□□ 1.43
ROMO1-204ENST00000374078 PALLDQ8WX93 1383 aa24■■□□□ 1.43
ROMO1-204ENST00000374078 PNNQ9H307 717 aaKnown RBP23.99■■□□□ 1.43
ROMO1-204ENST00000374078 STK32BQ9NY57 414 aa23.99■■□□□ 1.43
ROMO1-204ENST00000374078 HMGB2P26583 209 aaKnown RBP23.98■■□□□ 1.43
ROMO1-204ENST00000374078 CCNL1Q9UK58 526 aaPredicted RBP23.98■■□□□ 1.43
ROMO1-204ENST00000374078 MAP3K5Q99683 1374 aa23.96■■□□□ 1.43
ROMO1-204ENST00000374078 ANP32CO43423 234 aa23.96■■□□□ 1.43
ROMO1-204ENST00000374078 GNAT3A8MTJ3 354 aa23.95■■□□□ 1.42
ROMO1-204ENST00000374078 WDR43Q15061 677 aaKnown RBP eCLIP23.95■■□□□ 1.42
ROMO1-204ENST00000374078 MAPK8IP3Q9UPT6 1336 aa23.94■■□□□ 1.42
ROMO1-204ENST00000374078 PHACTR3Q96KR7 559 aa23.94■■□□□ 1.42
ROMO1-204ENST00000374078 PAPPAQ13219 1627 aa23.92■■□□□ 1.42
ROMO1-204ENST00000374078 RNMTO43148 476 aaKnown RBP23.92■■□□□ 1.42
ROMO1-204ENST00000374078 NFATC2IPQ8NCF5 419 aa23.92■■□□□ 1.42
ROMO1-204ENST00000374078 ANO8Q9HCE9 1232 aaPredicted RBP23.92■■□□□ 1.42
ROMO1-204ENST00000374078 LRRC4BQ9NT99 713 aa23.92■■□□□ 1.42
ROMO1-204ENST00000374078 ASAP1Q9ULH1 1129 aa23.92■■□□□ 1.42
ROMO1-204ENST00000374078 C5P01031 1676 aa23.92■■□□□ 1.42
ROMO1-204ENST00000374078 SLC15A2Q16348 729 aa23.91■■□□□ 1.42
ROMO1-204ENST00000374078 RTF1Q92541 710 aaKnown RBP23.91■■□□□ 1.42
ROMO1-204ENST00000374078 SLC52A2Q9HAB3 445 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms