RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 EVA1CP58658 441 aa14.44□□□□□ -0.1
PACSIN1-202ENST00000374043 RPAP2Q8IXW5 612 aaPredicted RBP14.44□□□□□ -0.1
PACSIN1-202ENST00000374043 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
PACSIN1-202ENST00000374043 SPHKAPQ2M3C7 1700 aa14.44□□□□□ -0.1
PACSIN1-202ENST00000374043 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
PACSIN1-202ENST00000374043 SMC5Q8IY18 1101 aa14.43□□□□□ -0.1
PACSIN1-202ENST00000374043 DDX11L8A8MPP1 907 aa14.43□□□□□ -0.1
PACSIN1-202ENST00000374043 MCM4P33991 863 aa14.43□□□□□ -0.1
PACSIN1-202ENST00000374043 KIF1BO60333 1816 aa14.43□□□□□ -0.1
PACSIN1-202ENST00000374043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 ABCA6Q8N139 1617 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 GORABQ5T7V8 394 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 ORAI2Q96SN7 254 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 DDX17Q92841 729 aaKnown RBP14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 GPATCH3Q96I76 525 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 HECW2Q9P2P5 1572 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 SHROOM2Q13796 1616 aa14.42□□□□□ -0.1
PACSIN1-202ENST00000374043 PI4KAP2A4QPH2 592 aa14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 PI4KAP1Q8N8J0 262 aa14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 PHAXQ9H814 394 aaKnown RBP14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 ROBO2Q9HCK4 1378 aa14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 K7ELQ4 463 aaPredicted RBP14.41□□□□□ -0.1
PACSIN1-202ENST00000374043 CEP152O94986 1710 aa14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 DTNBO60941 627 aa14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 CCDC85AQ96PX6 553 aaPredicted RBP14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 BMP2KLQ5H9B9 411 aa14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
PACSIN1-202ENST00000374043 SDSP20132 328 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 FOSBP53539 338 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 CLASRPQ8N2M8 674 aaKnown RBP14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 TMEM2Q9UHN6 1383 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 ERC2O15083 957 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 PTCD1O75127 700 aaKnown RBP14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 PPRC1Q5VV67 1664 aaKnown RBP14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 CHPF2Q9P2E5 772 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 GOLGA6L4A6NEF3 574 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
PACSIN1-202ENST00000374043 EDC4Q6P2E9 1401 aaKnown RBP14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 PRPF40AO75400 957 aaKnown RBP14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 SSFA2P28290 1259 aa14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 ABCA9Q8IUA7 1624 aa14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 CAVIN1Q6NZI2 390 aaKnown RBP14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
PACSIN1-202ENST00000374043 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 HOXC9P31274 260 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 CEP85Q6P2H3 762 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 MX1P20591 662 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 DNTTIP2Q5QJE6 756 aaKnown RBP14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 KRT28Q7Z3Y7 464 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 RNF214Q8ND24 703 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 ANKRD44Q8N8A2 993 aa14.37□□□□□ -0.11
PACSIN1-202ENST00000374043 RABEP1Q15276 862 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 ARAP3Q8WWN8 1544 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 CHL1O00533 1208 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 HSPA2P54652 639 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 PLEKHM2Q8IWE5 1019 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 MPNDQ8N594 471 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 VPS37CA5D8V6 355 aaPredicted RBP14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
PACSIN1-202ENST00000374043 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 MSH6P52701 1360 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 NPHP1O15259 732 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 KCNQ3O43525 872 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 AACSQ86V21 672 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 PRDM11Q9NQV5 511 aa14.35□□□□□ -0.11
PACSIN1-202ENST00000374043 KIDINS220Q9ULH0 1771 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 FLT4P35916 1363 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 FSD1Q9BTV5 496 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 ARID3AQ99856 593 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 PTPRCP08575 1304 aa14.34□□□□□ -0.11
PACSIN1-202ENST00000374043 ATP5J2-PTCD1G3V325 749 aa14.33□□□□□ -0.11
PACSIN1-202ENST00000374043 NBPF6Q5VWK0 638 aa14.33□□□□□ -0.11
PACSIN1-202ENST00000374043 NBPF4Q96M43 638 aa14.33□□□□□ -0.11
PACSIN1-202ENST00000374043 DCTPP1Q9H773 170 aa14.33□□□□□ -0.11
PACSIN1-202ENST00000374043 PA2G4Q9UQ80 394 aaKnown RBP14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 ADGRB3O60242 1522 aa14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 INO80Q9ULG1 1556 aaPredicted RBP14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 CABP4P57796 275 aa14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.12
PACSIN1-202ENST00000374043 GLI2P10070 1586 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms