RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TTC21AQ8NDW8 1320 aa29.85■■■□□ 2.37
CDK9-201ENST00000373264 PIK3C2AO00443 1686 aa29.85■■■□□ 2.37
CDK9-201ENST00000373264 FLT4P35916 1363 aa29.84■■■□□ 2.37
CDK9-201ENST00000373264 BMP2KLQ5H9B9 411 aa29.84■■■□□ 2.37
CDK9-201ENST00000373264 G2E3Q7L622 706 aa29.84■■■□□ 2.37
CDK9-201ENST00000373264 C16orf71Q8IYS4 520 aaPredicted RBP29.84■■■□□ 2.37
CDK9-201ENST00000373264 FMN2Q9NZ56 1722 aa29.84■■■□□ 2.37
CDK9-201ENST00000373264 SLC4A2P04920 1241 aa29.83■■■□□ 2.37
CDK9-201ENST00000373264 IL27Q8NEV9 243 aa29.83■■■□□ 2.37
CDK9-201ENST00000373264 SBNO1A3KN83 1393 aa29.83■■■□□ 2.37
CDK9-201ENST00000373264 INTS3Q68E01 1043 aaKnown RBP29.83■■■□□ 2.37
CDK9-201ENST00000373264 MSH6P52701 1360 aa29.83■■■□□ 2.37
CDK9-201ENST00000373264 LTV1Q96GA3 475 aaPredicted RBP29.82■■■□□ 2.36
CDK9-201ENST00000373264 CHMP4BQ9H444 224 aaKnown RBP29.82■■■□□ 2.36
CDK9-201ENST00000373264 ARHGEF10O15013 1369 aa29.82■■■□□ 2.36
CDK9-201ENST00000373264 APBB1O00213 710 aa29.81■■■□□ 2.36
CDK9-201ENST00000373264 MEIS3Q99687 375 aa29.81■■■□□ 2.36
CDK9-201ENST00000373264 F6X3S4 739 aa29.81■■■□□ 2.36
CDK9-201ENST00000373264 TSPYL4Q9UJ04 414 aa29.81■■■□□ 2.36
CDK9-201ENST00000373264 OTUD7AQ8TE49 926 aaPredicted RBP29.8■■■□□ 2.36
CDK9-201ENST00000373264 TBC1D9Q6ZT07 1266 aa29.79■■■□□ 2.36
CDK9-201ENST00000373264 KIAA0232Q92628 1395 aa29.79■■■□□ 2.36
CDK9-201ENST00000373264 RTF1Q92541 710 aaKnown RBP29.79■■■□□ 2.36
CDK9-201ENST00000373264 ATP10DQ9P241 1426 aa29.79■■■□□ 2.36
CDK9-201ENST00000373264 IGSF1Q8N6C5 1336 aa29.78■■■□□ 2.36
CDK9-201ENST00000373264 GSPT1P15170 499 aaKnown RBP29.78■■■□□ 2.36
CDK9-201ENST00000373264 NECTIN2Q92692 538 aa29.77■■■□□ 2.36
CDK9-201ENST00000373264 C14orf37Q86TY3 774 aa29.77■■■□□ 2.36
CDK9-201ENST00000373264 KDRP35968 1356 aa29.76■■■□□ 2.36
CDK9-201ENST00000373264 SMARCA5O60264 1052 aaPredicted RBP29.76■■■□□ 2.35
CDK9-201ENST00000373264 SLC4A10Q6U841 1118 aa29.76■■■□□ 2.35
CDK9-201ENST00000373264 USHBP1Q8N6Y0 703 aa29.76■■■□□ 2.35
CDK9-201ENST00000373264 DCTPP1Q9H773 170 aa29.76■■■□□ 2.35
CDK9-201ENST00000373264 XRN1Q8IZH2 1706 aaKnown RBP29.76■■■□□ 2.35
CDK9-201ENST00000373264 ABTB2Q8N961 1025 aa29.76■■■□□ 2.35
CDK9-201ENST00000373264 HOXC9P31274 260 aa29.75■■■□□ 2.35
CDK9-201ENST00000373264 RBM25P49756 843 aaKnown RBP29.75■■■□□ 2.35
CDK9-201ENST00000373264 CEP85Q6P2H3 762 aa29.75■■■□□ 2.35
CDK9-201ENST00000373264 PLEKHM2Q8IWE5 1019 aa29.75■■■□□ 2.35
CDK9-201ENST00000373264 BRPF3Q9ULD4 1205 aa29.74■■■□□ 2.35
CDK9-201ENST00000373264 KIF2CQ99661 725 aa29.74■■■□□ 2.35
CDK9-201ENST00000373264 ANKRD44Q8N8A2 993 aa29.73■■■□□ 2.35
CDK9-201ENST00000373264 RTL1A6NKG5 1358 aa29.73■■■□□ 2.35
CDK9-201ENST00000373264 TRHP20396 242 aaPredicted RBP29.72■■■□□ 2.35
CDK9-201ENST00000373264 RBM42Q9BTD8 480 aaKnown RBP29.72■■■□□ 2.35
CDK9-201ENST00000373264 CD2BP2O95400 341 aaKnown RBP29.71■■■□□ 2.35
CDK9-201ENST00000373264 MARF1Q9Y4F3 1742 aaKnown RBP29.71■■■□□ 2.35
CDK9-201ENST00000373264 PLEKHG5O94827 1062 aa29.71■■■□□ 2.35
CDK9-201ENST00000373264 KIF24Q5T7B8 1368 aa29.71■■■□□ 2.35
CDK9-201ENST00000373264 PTPRCP08575 1304 aa29.69■■■□□ 2.34
CDK9-201ENST00000373264 HSCBQ8IWL3 235 aa29.69■■■□□ 2.34
CDK9-201ENST00000373264 RTN4Q9NQC3 1192 aaKnown RBP29.69■■■□□ 2.34
CDK9-201ENST00000373264 GAS2L2Q8NHY3 880 aa29.67■■■□□ 2.34
CDK9-201ENST00000373264 IL17REQ8NFR9 667 aa29.67■■■□□ 2.34
CDK9-201ENST00000373264 NWD1Q149M9 1564 aa29.66■■■□□ 2.34
CDK9-201ENST00000373264 HAP1P54257 671 aaPredicted RBP29.66■■■□□ 2.34
CDK9-201ENST00000373264 SETD1BQ9UPS6 1966 aaKnown RBP29.65■■■□□ 2.34
CDK9-201ENST00000373264 ZBTB7CA1YPR0 619 aa29.65■■■□□ 2.34
CDK9-201ENST00000373264 FOXD4L1Q9NU39 408 aa29.65■■■□□ 2.34
CDK9-201ENST00000373264 GNAT3A8MTJ3 354 aa29.64■■■□□ 2.33
CDK9-201ENST00000373264 RPAP2Q8IXW5 612 aaPredicted RBP29.64■■■□□ 2.33
CDK9-201ENST00000373264 TTC22Q5TAA0 569 aa29.63■■■□□ 2.33
CDK9-201ENST00000373264 ANKARQ7Z5J8 1434 aa29.63■■■□□ 2.33
CDK9-201ENST00000373264 CDC45O75419 566 aa29.63■■■□□ 2.33
CDK9-201ENST00000373264 PHF8Q9UPP1 1060 aa29.61■■■□□ 2.33
CDK9-201ENST00000373264 CHMP5Q9NZZ3 219 aa29.61■■■□□ 2.33
CDK9-201ENST00000373264 MCM4P33991 863 aa29.58■■■□□ 2.33
CDK9-201ENST00000373264 FLIIQ13045 1269 aa29.58■■■□□ 2.33
CDK9-201ENST00000373264 XPCQ01831 940 aaPredicted RBP29.57■■■□□ 2.32
CDK9-201ENST00000373264 FKBP5Q13451 457 aaPredicted RBP29.57■■■□□ 2.32
CDK9-201ENST00000373264 SNX21Q969T3 373 aa29.57■■■□□ 2.32
CDK9-201ENST00000373264 STK31Q9BXU1 1019 aa29.57■■■□□ 2.32
CDK9-201ENST00000373264 SDSP20132 328 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 TSHZ3Q63HK5 1081 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 DDIT3P35638 169 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 EXOC6BQ9Y2D4 811 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 MAP3K5Q99683 1374 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 NCOA3Q9Y6Q9 1424 aa29.56■■■□□ 2.32
CDK9-201ENST00000373264 HSP90AB1P08238 724 aaKnown RBP29.55■■■□□ 2.32
CDK9-201ENST00000373264 ESCO1Q5FWF5 840 aa29.55■■■□□ 2.32
CDK9-201ENST00000373264 NBPF6Q5VWK0 638 aa29.55■■■□□ 2.32
CDK9-201ENST00000373264 NBPF4Q96M43 638 aa29.55■■■□□ 2.32
CDK9-201ENST00000373264 ARXQ96QS3 562 aa29.55■■■□□ 2.32
CDK9-201ENST00000373264 GZF1Q9H116 711 aaPredicted RBP29.54■■■□□ 2.32
CDK9-201ENST00000373264 LRRC37A3O60309 1634 aa29.54■■■□□ 2.32
CDK9-201ENST00000373264 CCT4P50991 539 aaKnown RBP29.53■■■□□ 2.32
CDK9-201ENST00000373264 ANKLE2Q86XL3 938 aa29.52■■■□□ 2.32
CDK9-201ENST00000373264 LRRC59Q96AG4 307 aaKnown RBP29.52■■■□□ 2.32
CDK9-201ENST00000373264 LGR6Q9HBX8 967 aa29.52■■■□□ 2.32
CDK9-201ENST00000373264 PNMA6EA0A0J9YXQ4 647 aa29.52■■■□□ 2.32
CDK9-201ENST00000373264 LTN1O94822 1766 aa29.52■■■□□ 2.32
CDK9-201ENST00000373264 HTATSF1O43719 755 aaKnown RBP29.51■■■□□ 2.32
CDK9-201ENST00000373264 TAF7Q15545 349 aaPredicted RBP29.51■■■□□ 2.32
CDK9-201ENST00000373264 CCDC30Q5VVM6 783 aa29.51■■■□□ 2.32
CDK9-201ENST00000373264 PHAXQ9H814 394 aaKnown RBP29.51■■■□□ 2.31
CDK9-201ENST00000373264 FAM208AQ9UK61 1670 aaKnown RBP29.5■■■□□ 2.31
CDK9-201ENST00000373264 PSME1Q06323 249 aa29.49■■■□□ 2.31
CDK9-201ENST00000373264 CHD2O14647 1828 aaKnown RBP29.49■■■□□ 2.31
CDK9-201ENST00000373264 GNAI2P04899 355 aa29.49■■■□□ 2.31
CDK9-201ENST00000373264 KCNQ3O43525 872 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms