RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 EXOSC9Q06265 439 aaKnown RBP8.18□□□□□ -1.1
CHD6-202ENST00000373222 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
CHD6-202ENST00000373222 CFAP53Q96M91 514 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 CDK19Q9BWU1 502 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 USP19O94966 1318 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 COL3A1P02461 1466 aaPredicted RBP8.18□□□□□ -1.1
CHD6-202ENST00000373222 NLRP1Q9C000 1473 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
CHD6-202ENST00000373222 PDE3AQ14432 1141 aa8.18□□□□□ -1.1
CHD6-202ENST00000373222 THUMPD2Q9BTF0 503 aaKnown RBP8.18□□□□□ -1.1
CHD6-202ENST00000373222 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
CHD6-202ENST00000373222 ALKQ9UM73 1620 aa8.17□□□□□ -1.1
CHD6-202ENST00000373222 CLTCQ00610 1675 aaKnown RBP8.17□□□□□ -1.1
CHD6-202ENST00000373222 ADGRB2O60241 1585 aa8.17□□□□□ -1.1
CHD6-202ENST00000373222 ARHGAP31Q2M1Z3 1444 aa8.17□□□□□ -1.1
CHD6-202ENST00000373222 TMPOP42166 694 aaKnown RBP8.17□□□□□ -1.1
CHD6-202ENST00000373222 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
CHD6-202ENST00000373222 HMOX1P09601 288 aa8.16□□□□□ -1.1
CHD6-202ENST00000373222 IFNL1Q8IU54 200 aa8.16□□□□□ -1.1
CHD6-202ENST00000373222 WDR63Q8IWG1 891 aa8.16□□□□□ -1.1
CHD6-202ENST00000373222 SSH1Q8WYL5 1049 aa8.15□□□□□ -1.1
CHD6-202ENST00000373222 FBXW7Q969H0 707 aa8.15□□□□□ -1.1
CHD6-202ENST00000373222 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.1
CHD6-202ENST00000373222 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
CHD6-202ENST00000373222 EMILIN1Q9Y6C2 1016 aa8.15□□□□□ -1.1
CHD6-202ENST00000373222 KIF20BQ96Q89 1820 aa8.15□□□□□ -1.11
CHD6-202ENST00000373222 TRIM27P14373 513 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 RIPK4P57078 832 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 ARHGEF40Q8TER5 1519 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 PHACTR3Q96KR7 559 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 SMC4Q9NTJ3 1288 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 LRRC7Q96NW7 1537 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 PDE4DQ08499 809 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 NFKBIBQ15653 356 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 ZFYVE9O95405 1425 aa8.14□□□□□ -1.11
CHD6-202ENST00000373222 NUTM2FA1L443 756 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 ELL2O00472 640 aaPredicted RBP8.13□□□□□ -1.11
CHD6-202ENST00000373222 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 TXNDC2Q86VQ3 553 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 NME9Q86XW9 330 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 SETD1AO15047 1707 aaKnown RBP8.13□□□□□ -1.11
CHD6-202ENST00000373222 NSD2O96028 1365 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 PLEKHG3A1L390 1219 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 MVPQ14764 893 aaKnown RBP8.13□□□□□ -1.11
CHD6-202ENST00000373222 NGEFQ8N5V2 710 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 MYH16Q9H6N6 1097 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 TERF2IPQ9NYB0 399 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 POLKQ9UBT6 870 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 NOB1Q9ULX3 412 aaKnown RBP8.13□□□□□ -1.11
CHD6-202ENST00000373222 DIP2BQ9P265 1576 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 METP08581 1390 aa8.13□□□□□ -1.11
CHD6-202ENST00000373222 RIMBP3CA6NJZ7 1639 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 RIMBP3BA6NNM3 1639 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 RIMBP3Q9UFD9 1639 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 TRIM66O15016 1216 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 FRAT2O75474 233 aaPredicted RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 HOXB1P14653 301 aaPredicted RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 PRKAR2BP31323 418 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 RRS1Q15050 365 aaKnown RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 ITPRIPQ8IWB1 547 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 FTSJ3Q8IY81 847 aaKnown RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
CHD6-202ENST00000373222 DLG5Q8TDM6 1919 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 ATAD2Q6PL18 1390 aa8.12□□□□□ -1.11
CHD6-202ENST00000373222 FAM83GA6ND36 823 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 ZKSCAN2Q63HK3 967 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 TMEM57Q8N5G2 664 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 SLKQ9H2G2 1235 aaPredicted RBP8.11□□□□□ -1.11
CHD6-202ENST00000373222 RYDENQ9NUL5 291 aaKnown RBP8.11□□□□□ -1.11
CHD6-202ENST00000373222 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 HDGFL2Q7Z4V5 671 aaPredicted RBP8.11□□□□□ -1.11
CHD6-202ENST00000373222 RIMS2Q9UQ26 1411 aa8.11□□□□□ -1.11
CHD6-202ENST00000373222 ERBB3P21860 1342 aa8.1□□□□□ -1.11
CHD6-202ENST00000373222 DCTN1Q14203 1278 aa8.1□□□□□ -1.11
CHD6-202ENST00000373222 NINLQ9Y2I6 1382 aa8.1□□□□□ -1.11
CHD6-202ENST00000373222 BCL11BQ9C0K0 894 aaPredicted RBP8.1□□□□□ -1.11
CHD6-202ENST00000373222 CPS1P31327 1500 aa8.1□□□□□ -1.11
CHD6-202ENST00000373222 MED14O60244 1454 aa8.1□□□□□ -1.11
CHD6-202ENST00000373222 SOX12O15370 315 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 PNPLA6Q8IY17 1366 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 PMFBP1Q8TBY8 1022 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 CWC22Q9HCG8 908 aaKnown RBP8.09□□□□□ -1.11
CHD6-202ENST00000373222 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
CHD6-202ENST00000373222 SERPINA10Q9UK55 444 aa8.08□□□□□ -1.12
CHD6-202ENST00000373222 PRR36Q9H6K5 1346 aa8.08□□□□□ -1.12
CHD6-202ENST00000373222 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
CHD6-202ENST00000373222 KRI1Q8N9T8 703 aaKnown RBP8.08□□□□□ -1.12
CHD6-202ENST00000373222 FAM135BQ49AJ0 1406 aa8.08□□□□□ -1.12
CHD6-202ENST00000373222 WASLO00401 505 aaPredicted RBP8.07□□□□□ -1.12
CHD6-202ENST00000373222 CCDC97Q96F63 343 aaPredicted RBP8.07□□□□□ -1.12
CHD6-202ENST00000373222 RWDD1Q9H446 243 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms