RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 EXOC6BQ9Y2D4 811 aa13.49□□□□□ -0.25
GRIK3-202ENST00000373093 ARHGEF40Q8TER5 1519 aa13.49□□□□□ -0.25
GRIK3-202ENST00000373093 SNX21Q969T3 373 aa13.49□□□□□ -0.25
GRIK3-202ENST00000373093 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
GRIK3-202ENST00000373093 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
GRIK3-202ENST00000373093 MSNP26038 577 aaKnown RBP13.48□□□□□ -0.25
GRIK3-202ENST00000373093 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
GRIK3-202ENST00000373093 GCC1Q96CN9 775 aa13.48□□□□□ -0.25
GRIK3-202ENST00000373093 RBSNQ9H1K0 784 aa13.48□□□□□ -0.25
GRIK3-202ENST00000373093 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
GRIK3-202ENST00000373093 ANP32BQ92688 251 aaKnown RBP13.47□□□□□ -0.25
GRIK3-202ENST00000373093 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 GOLGA6L22H0YM25 854 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 SDSP20132 328 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 CPS1P31327 1500 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 ABCC4O15439 1325 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 CDC45O75419 566 aa13.47□□□□□ -0.25
GRIK3-202ENST00000373093 ESF1Q9H501 851 aaKnown RBP13.47□□□□□ -0.25
GRIK3-202ENST00000373093 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
GRIK3-202ENST00000373093 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.25
GRIK3-202ENST00000373093 USP32Q8NFA0 1604 aa13.46□□□□□ -0.26
GRIK3-202ENST00000373093 MSH6P52701 1360 aa13.46□□□□□ -0.26
GRIK3-202ENST00000373093 RIMS2Q9UQ26 1411 aa13.46□□□□□ -0.26
GRIK3-202ENST00000373093 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
GRIK3-202ENST00000373093 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
GRIK3-202ENST00000373093 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
GRIK3-202ENST00000373093 NCOA3Q9Y6Q9 1424 aa13.45□□□□□ -0.26
GRIK3-202ENST00000373093 SYCE3A1L190 88 aa13.45□□□□□ -0.26
GRIK3-202ENST00000373093 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
GRIK3-202ENST00000373093 ZSCAN30Q86W11 494 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 API5Q9BZZ5 524 aaKnown RBP13.44□□□□□ -0.26
GRIK3-202ENST00000373093 GDPD2Q9HCC8 539 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 ACEP12821 1306 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 TMEM131LA2VDJ0 1609 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 MED14O60244 1454 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 SKOR2Q2VWA4 1001 aaPredicted RBP13.44□□□□□ -0.26
GRIK3-202ENST00000373093 TTC22Q5TAA0 569 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 USHBP1Q8N6Y0 703 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 TSC1Q92574 1164 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
GRIK3-202ENST00000373093 DCTPP1Q9H773 170 aa13.44□□□□□ -0.26
GRIK3-202ENST00000373093 CCDC173Q0VFZ6 552 aa13.43□□□□□ -0.26
GRIK3-202ENST00000373093 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
GRIK3-202ENST00000373093 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
GRIK3-202ENST00000373093 FAM177BA6PVY3 158 aa13.43□□□□□ -0.26
GRIK3-202ENST00000373093 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
GRIK3-202ENST00000373093 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
GRIK3-202ENST00000373093 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 LMBRD1Q9NUN5 540 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 ARHGAP45Q92619 1136 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
GRIK3-202ENST00000373093 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
GRIK3-202ENST00000373093 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
GRIK3-202ENST00000373093 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
GRIK3-202ENST00000373093 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
GRIK3-202ENST00000373093 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
GRIK3-202ENST00000373093 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
GRIK3-202ENST00000373093 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 RICTORQ6R327 1708 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 ZMYM3Q14202 1370 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 PTCH1Q13635 1447 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 ANXA1P04083 346 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 LTKP29376 864 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
GRIK3-202ENST00000373093 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 ROBO2Q9HCK4 1378 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
GRIK3-202ENST00000373093 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
GRIK3-202ENST00000373093 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
GRIK3-202ENST00000373093 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
GRIK3-202ENST00000373093 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
GRIK3-202ENST00000373093 CHL1O00533 1208 aa13.39□□□□□ -0.27
GRIK3-202ENST00000373093 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
GRIK3-202ENST00000373093 PALD1Q9ULE6 856 aa13.39□□□□□ -0.27
GRIK3-202ENST00000373093 UQCRHLA0A096LP55 91 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 UQCRHP07919 91 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 NEK4P51957 841 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 LMOD3Q0VAK6 560 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 UNC5CLQ8IV45 518 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 OFD1O75665 1012 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 AMPHP49418 695 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 INTS3Q68E01 1043 aaKnown RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 IL25Q9H293 177 aa13.38□□□□□ -0.27
GRIK3-202ENST00000373093 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
GRIK3-202ENST00000373093 PLCB2Q00722 1185 aa13.37□□□□□ -0.27
GRIK3-202ENST00000373093 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
GRIK3-202ENST00000373093 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms