RNA–Protein interactions for RNA: ENST00000372818.5

TRIT1-202, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 2,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-202ENST00000372818 MST1RQ04912 1400 aa17.44■□□□□ 0.38
TRIT1-202ENST00000372818 MTHFSDQ2M296 383 aaKnown RBP17.43■□□□□ 0.38
TRIT1-202ENST00000372818 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
TRIT1-202ENST00000372818 VAMP4O75379 141 aa17.43■□□□□ 0.38
TRIT1-202ENST00000372818 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
TRIT1-202ENST00000372818 TRIM27P14373 513 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 MCM10Q7L590 875 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 LTN1O94822 1766 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
TRIT1-202ENST00000372818 SLIT3O75094 1523 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 BRPF1P55201 1214 aaPredicted RBP17.42■□□□□ 0.38
TRIT1-202ENST00000372818 ATF7IPQ6VMQ6 1270 aa17.42■□□□□ 0.38
TRIT1-202ENST00000372818 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
TRIT1-202ENST00000372818 GCP02774 474 aa17.41■□□□□ 0.38
TRIT1-202ENST00000372818 MVPQ14764 893 aaKnown RBP17.41■□□□□ 0.38
TRIT1-202ENST00000372818 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
TRIT1-202ENST00000372818 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
TRIT1-202ENST00000372818 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
TRIT1-202ENST00000372818 CHL1O00533 1208 aa17.4■□□□□ 0.38
TRIT1-202ENST00000372818 IPO8O15397 1037 aaKnown RBP17.4■□□□□ 0.38
TRIT1-202ENST00000372818 C8orf58Q8NAV2 365 aa17.4■□□□□ 0.38
TRIT1-202ENST00000372818 PHRF1Q9P1Y6 1649 aaKnown RBP17.39■□□□□ 0.38
TRIT1-202ENST00000372818 CRB1P82279 1406 aa17.39■□□□□ 0.37
TRIT1-202ENST00000372818 TWISTNBQ3B726 338 aaPredicted RBP17.39■□□□□ 0.37
TRIT1-202ENST00000372818 CADPS2Q86UW7 1296 aa17.39■□□□□ 0.37
TRIT1-202ENST00000372818 LMOD2Q6P5Q4 547 aa17.38■□□□□ 0.37
TRIT1-202ENST00000372818 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
TRIT1-202ENST00000372818 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
TRIT1-202ENST00000372818 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
TRIT1-202ENST00000372818 RTF1Q92541 710 aaKnown RBP17.38■□□□□ 0.37
TRIT1-202ENST00000372818 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.38■□□□□ 0.37
TRIT1-202ENST00000372818 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
TRIT1-202ENST00000372818 BECN1Q14457 450 aa17.37■□□□□ 0.37
TRIT1-202ENST00000372818 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
TRIT1-202ENST00000372818 MSH6P52701 1360 aa17.36■□□□□ 0.37
TRIT1-202ENST00000372818 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
TRIT1-202ENST00000372818 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
TRIT1-202ENST00000372818 SEC24BO95487 1268 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 FAM43AQ8N2R8 423 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
TRIT1-202ENST00000372818 ALS2Q96Q42 1657 aa17.34■□□□□ 0.37
TRIT1-202ENST00000372818 TMEM57Q8N5G2 664 aa17.34■□□□□ 0.37
TRIT1-202ENST00000372818 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
TRIT1-202ENST00000372818 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
TRIT1-202ENST00000372818 DDX19BQ9UMR2 479 aa17.34■□□□□ 0.37
TRIT1-202ENST00000372818 GNAT3A8MTJ3 354 aa17.33■□□□□ 0.37
TRIT1-202ENST00000372818 PLEKHG5O94827 1062 aa17.33■□□□□ 0.37
TRIT1-202ENST00000372818 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
TRIT1-202ENST00000372818 ITPRIPQ8IWB1 547 aa17.33■□□□□ 0.36
TRIT1-202ENST00000372818 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
TRIT1-202ENST00000372818 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
TRIT1-202ENST00000372818 HAP1P54257 671 aaPredicted RBP17.31■□□□□ 0.36
TRIT1-202ENST00000372818 KRT24Q2M2I5 525 aa17.31■□□□□ 0.36
TRIT1-202ENST00000372818 MED1Q15648 1581 aaPredicted RBP17.31■□□□□ 0.36
TRIT1-202ENST00000372818 LRRC59Q96AG4 307 aaKnown RBP17.31■□□□□ 0.36
TRIT1-202ENST00000372818 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
TRIT1-202ENST00000372818 ANTXR1Q9H6X2 564 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 AXIN2Q9Y2T1 843 aa17.3■□□□□ 0.36
TRIT1-202ENST00000372818 NCAPD2Q15021 1401 aa17.29■□□□□ 0.36
TRIT1-202ENST00000372818 ZNF335Q9H4Z2 1342 aaPredicted RBP17.29■□□□□ 0.36
TRIT1-202ENST00000372818 PXDNQ92626 1479 aa17.29■□□□□ 0.36
TRIT1-202ENST00000372818 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
TRIT1-202ENST00000372818 RWDD1Q9H446 243 aaPredicted RBP17.28■□□□□ 0.36
TRIT1-202ENST00000372818 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
TRIT1-202ENST00000372818 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
TRIT1-202ENST00000372818 ZC3H6P61129 1189 aaKnown RBP17.28■□□□□ 0.36
TRIT1-202ENST00000372818 UPF2Q9HAU5 1272 aaKnown RBP17.28■□□□□ 0.36
TRIT1-202ENST00000372818 ABCC4O15439 1325 aa17.27■□□□□ 0.36
TRIT1-202ENST00000372818 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.36
TRIT1-202ENST00000372818 BRINP3Q76B58 766 aa17.26■□□□□ 0.35
TRIT1-202ENST00000372818 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
TRIT1-202ENST00000372818 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
TRIT1-202ENST00000372818 SPATA31A3Q5VYP0 1347 aa17.26■□□□□ 0.35
TRIT1-202ENST00000372818 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
TRIT1-202ENST00000372818 HDAC1Q13547 482 aaPredicted RBP17.25■□□□□ 0.35
TRIT1-202ENST00000372818 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
TRIT1-202ENST00000372818 L1TD1Q5T7N2 865 aaKnown RBP17.25■□□□□ 0.35
TRIT1-202ENST00000372818 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
TRIT1-202ENST00000372818 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
TRIT1-202ENST00000372818 ERBB3P21860 1342 aa17.24■□□□□ 0.35
TRIT1-202ENST00000372818 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
TRIT1-202ENST00000372818 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
TRIT1-202ENST00000372818 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
TRIT1-202ENST00000372818 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
TRIT1-202ENST00000372818 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
TRIT1-202ENST00000372818 CABLES1Q8TDN4 633 aa17.23■□□□□ 0.35
TRIT1-202ENST00000372818 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
TRIT1-202ENST00000372818 CHMP4BQ9H444 224 aaKnown RBP17.22■□□□□ 0.35
TRIT1-202ENST00000372818 AKAP4Q5JQC9 854 aa17.21■□□□□ 0.35
TRIT1-202ENST00000372818 ZNF530Q6P9A1 599 aaPredicted RBP17.21■□□□□ 0.35
TRIT1-202ENST00000372818 RGS12O14924 1447 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms