RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PRIM1P49642 420 aaKnown RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 TWISTNBQ3B726 338 aaPredicted RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 R3HCC1Q9Y3T6 440 aaKnown RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 PDCL3Q9H2J4 239 aa18.24■□□□□ 0.51
COL9A2-202ENST00000372748 CHMP4BQ9H444 224 aaKnown RBP18.24■□□□□ 0.51
COL9A2-202ENST00000372748 IBTKQ9P2D0 1353 aaPredicted RBP18.23■□□□□ 0.51
COL9A2-202ENST00000372748 ZNF445P59923 1031 aa18.23■□□□□ 0.51
COL9A2-202ENST00000372748 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
COL9A2-202ENST00000372748 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
COL9A2-202ENST00000372748 FOXD4L5Q5VV16 416 aaPredicted RBP18.23■□□□□ 0.51
COL9A2-202ENST00000372748 FOXD4L4Q8WXT5 416 aaPredicted RBP18.23■□□□□ 0.51
COL9A2-202ENST00000372748 ZNF428Q96B54 188 aa18.23■□□□□ 0.51
COL9A2-202ENST00000372748 IFT57Q9NWB7 429 aa18.23■□□□□ 0.51
COL9A2-202ENST00000372748 NUCB2P80303 420 aa18.22■□□□□ 0.51
COL9A2-202ENST00000372748 ABCC4O15439 1325 aa18.22■□□□□ 0.51
COL9A2-202ENST00000372748 CDC42BPGQ6DT37 1551 aa18.22■□□□□ 0.51
COL9A2-202ENST00000372748 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
COL9A2-202ENST00000372748 CPSF1Q10570 1443 aaKnown RBP18.22■□□□□ 0.51
COL9A2-202ENST00000372748 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
COL9A2-202ENST00000372748 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
COL9A2-202ENST00000372748 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
COL9A2-202ENST00000372748 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
COL9A2-202ENST00000372748 DLC1Q96QB1 1528 aa18.21■□□□□ 0.5
COL9A2-202ENST00000372748 PTCH1Q13635 1447 aa18.21■□□□□ 0.5
COL9A2-202ENST00000372748 ZNF853P0CG23 659 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 ESF1Q9H501 851 aaKnown RBP18.2■□□□□ 0.5
COL9A2-202ENST00000372748 FAM13BQ9NYF5 915 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 CPS1P31327 1500 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 PIK3R4Q99570 1358 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 CYP2E1P05181 493 aaPredicted RBP18.2■□□□□ 0.5
COL9A2-202ENST00000372748 GPT2Q8TD30 523 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 SOX12O15370 315 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
COL9A2-202ENST00000372748 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
COL9A2-202ENST00000372748 KRT24Q2M2I5 525 aa18.19■□□□□ 0.5
COL9A2-202ENST00000372748 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
COL9A2-202ENST00000372748 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
COL9A2-202ENST00000372748 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
COL9A2-202ENST00000372748 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
COL9A2-202ENST00000372748 NSFL1CQ9UNZ2 370 aaKnown RBP18.18■□□□□ 0.5
COL9A2-202ENST00000372748 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
COL9A2-202ENST00000372748 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
COL9A2-202ENST00000372748 SDSP20132 328 aa18.17■□□□□ 0.5
COL9A2-202ENST00000372748 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
COL9A2-202ENST00000372748 ARID3AQ99856 593 aa18.17■□□□□ 0.5
COL9A2-202ENST00000372748 NOL7Q9UMY1 257 aaKnown RBP18.17■□□□□ 0.5
COL9A2-202ENST00000372748 SYCE3A1L190 88 aa18.17■□□□□ 0.5
COL9A2-202ENST00000372748 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
COL9A2-202ENST00000372748 SULT6B1Q6IMI4 303 aa18.16■□□□□ 0.5
COL9A2-202ENST00000372748 RNF214Q8ND24 703 aa18.16■□□□□ 0.5
COL9A2-202ENST00000372748 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL9A2-202ENST00000372748 API5Q9BZZ5 524 aaKnown RBP18.16■□□□□ 0.5
COL9A2-202ENST00000372748 TMEM63CQ9P1W3 806 aa18.16■□□□□ 0.5
COL9A2-202ENST00000372748 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
COL9A2-202ENST00000372748 ST18O60284 1047 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 LMOD3Q0VAK6 560 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 MCM10Q7L590 875 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 PDLIM2Q96JY6 352 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
COL9A2-202ENST00000372748 AATKQ6ZMQ8 1374 aa18.14■□□□□ 0.49
COL9A2-202ENST00000372748 ZBTB7CA1YPR0 619 aa18.14■□□□□ 0.49
COL9A2-202ENST00000372748 EIF4A2Q14240 407 aaKnown RBP18.14■□□□□ 0.49
COL9A2-202ENST00000372748 CWC22Q9HCG8 908 aaKnown RBP18.13■□□□□ 0.49
COL9A2-202ENST00000372748 AGLP35573 1532 aa18.13■□□□□ 0.49
COL9A2-202ENST00000372748 UQCRHLA0A096LP55 91 aa18.13■□□□□ 0.49
COL9A2-202ENST00000372748 UQCRHP07919 91 aa18.13■□□□□ 0.49
COL9A2-202ENST00000372748 CEBPAP49715 358 aaPredicted RBP18.13■□□□□ 0.49
COL9A2-202ENST00000372748 HS1BP3Q53T59 392 aa18.13■□□□□ 0.49
COL9A2-202ENST00000372748 ZNF500O60304 480 aaPredicted RBP18.12■□□□□ 0.49
COL9A2-202ENST00000372748 CASC1Q6TDU7 716 aa18.12■□□□□ 0.49
COL9A2-202ENST00000372748 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
COL9A2-202ENST00000372748 ZKSCAN5Q9Y2L8 839 aa18.11■□□□□ 0.49
COL9A2-202ENST00000372748 FOXD4L6Q3SYB3 417 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-202ENST00000372748 FOXD4L3Q6VB84 417 aaPredicted RBP18.11■□□□□ 0.49
COL9A2-202ENST00000372748 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
COL9A2-202ENST00000372748 LRSAM1Q6UWE0 723 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 ANKRD44Q8N8A2 993 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 MIS18AQ9NYP9 233 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 KNDC1Q76NI1 1749 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 ACEP12821 1306 aa18.1■□□□□ 0.49
COL9A2-202ENST00000372748 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
COL9A2-202ENST00000372748 NEK4P51957 841 aa18.09■□□□□ 0.49
COL9A2-202ENST00000372748 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
COL9A2-202ENST00000372748 TERF1P54274 439 aa18.09■□□□□ 0.49
COL9A2-202ENST00000372748 MPNDQ8N594 471 aa18.09■□□□□ 0.49
COL9A2-202ENST00000372748 MEIS3Q99687 375 aa18.09■□□□□ 0.49
COL9A2-202ENST00000372748 REC8O95072 547 aa18.08■□□□□ 0.48
COL9A2-202ENST00000372748 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.48
COL9A2-202ENST00000372748 REREQ9P2R6 1566 aa18.08■□□□□ 0.48
COL9A2-202ENST00000372748 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
COL9A2-202ENST00000372748 SLC26A8Q96RN1 970 aa18.07■□□□□ 0.48
COL9A2-202ENST00000372748 ERC2O15083 957 aa18.06■□□□□ 0.48
COL9A2-202ENST00000372748 TMX3Q96JJ7 454 aa18.06■□□□□ 0.48
COL9A2-202ENST00000372748 MON2Q7Z3U7 1717 aa18.06■□□□□ 0.48
COL9A2-202ENST00000372748 FOXO3O43524 673 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms