RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 USP31Q70CQ4 1352 aa15.84■□□□□ 0.13
CTPS1-202ENST00000372621 CRB1P82279 1406 aa15.84■□□□□ 0.13
CTPS1-202ENST00000372621 RRAGDQ9NQL2 400 aaPredicted RBP15.84■□□□□ 0.13
CTPS1-202ENST00000372621 USP6P35125 1406 aa15.84■□□□□ 0.13
CTPS1-202ENST00000372621 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
CTPS1-202ENST00000372621 RPAP2Q8IXW5 612 aaPredicted RBP15.84■□□□□ 0.13
CTPS1-202ENST00000372621 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
CTPS1-202ENST00000372621 CEP85Q6P2H3 762 aa15.83■□□□□ 0.13
CTPS1-202ENST00000372621 PTPRCP08575 1304 aa15.83■□□□□ 0.13
CTPS1-202ENST00000372621 RTL1A6NKG5 1358 aa15.83■□□□□ 0.13
CTPS1-202ENST00000372621 MRE11P49959 708 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 MCM10Q7L590 875 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 ACEP12821 1306 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 TNRQ92752 1358 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 SSH2Q76I76 1423 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 FMN2Q9NZ56 1722 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 MSH6P52701 1360 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
CTPS1-202ENST00000372621 GBP4Q96PP9 640 aa15.83■□□□□ 0.12
CTPS1-202ENST00000372621 ISY1Q9ULR0 285 aaKnown RBP15.83■□□□□ 0.12
CTPS1-202ENST00000372621 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
CTPS1-202ENST00000372621 CLEC17AQ6ZS10 378 aa15.82■□□□□ 0.12
CTPS1-202ENST00000372621 HSP90AB2PQ58FF8 381 aa15.81■□□□□ 0.12
CTPS1-202ENST00000372621 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
CTPS1-202ENST00000372621 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.81■□□□□ 0.12
CTPS1-202ENST00000372621 USP26Q9BXU7 913 aa15.8■□□□□ 0.12
CTPS1-202ENST00000372621 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
CTPS1-202ENST00000372621 ARXQ96QS3 562 aa15.8■□□□□ 0.12
CTPS1-202ENST00000372621 ARHGEF10O15013 1369 aa15.8■□□□□ 0.12
CTPS1-202ENST00000372621 GRPEL1Q9HAV7 217 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 PTMSP20962 102 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 RABEP1Q15276 862 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 SKOR2Q2VWA4 1001 aaPredicted RBP15.79■□□□□ 0.12
CTPS1-202ENST00000372621 RIMS1Q86UR5 1692 aaKnown RBP15.79■□□□□ 0.12
CTPS1-202ENST00000372621 MEIS3Q99687 375 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 PLEKHG1Q9ULL1 1385 aa15.79■□□□□ 0.12
CTPS1-202ENST00000372621 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
CTPS1-202ENST00000372621 AK9Q5TCS8 1911 aa15.78■□□□□ 0.12
CTPS1-202ENST00000372621 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
CTPS1-202ENST00000372621 ESF1Q9H501 851 aaKnown RBP15.78■□□□□ 0.12
CTPS1-202ENST00000372621 SDSP20132 328 aa15.77■□□□□ 0.12
CTPS1-202ENST00000372621 PTPRUQ92729 1446 aa15.77■□□□□ 0.11
CTPS1-202ENST00000372621 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.11
CTPS1-202ENST00000372621 KDRP35968 1356 aa15.77■□□□□ 0.11
CTPS1-202ENST00000372621 SSFA2P28290 1259 aa15.77■□□□□ 0.11
CTPS1-202ENST00000372621 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
CTPS1-202ENST00000372621 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CTPS1-202ENST00000372621 GAS2L3Q86XJ1 694 aa15.76■□□□□ 0.11
CTPS1-202ENST00000372621 SMARCA5O60264 1052 aaPredicted RBP15.75■□□□□ 0.11
CTPS1-202ENST00000372621 LTKP29376 864 aa15.75■□□□□ 0.11
CTPS1-202ENST00000372621 LRRC37A3O60309 1634 aa15.75■□□□□ 0.11
CTPS1-202ENST00000372621 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
CTPS1-202ENST00000372621 FOXO3O43524 673 aa15.74■□□□□ 0.11
CTPS1-202ENST00000372621 OSBPL3Q9H4L5 887 aa15.74■□□□□ 0.11
CTPS1-202ENST00000372621 MIS18AQ9NYP9 233 aa15.74■□□□□ 0.11
CTPS1-202ENST00000372621 TTC21AQ8NDW8 1320 aa15.74■□□□□ 0.11
CTPS1-202ENST00000372621 CYP2E1P05181 493 aaPredicted RBP15.73■□□□□ 0.11
CTPS1-202ENST00000372621 G2E3Q7L622 706 aa15.73■□□□□ 0.11
CTPS1-202ENST00000372621 SBNO1A3KN83 1393 aa15.73■□□□□ 0.11
CTPS1-202ENST00000372621 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
CTPS1-202ENST00000372621 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
CTPS1-202ENST00000372621 FLT4P35916 1363 aa15.73■□□□□ 0.11
CTPS1-202ENST00000372621 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
CTPS1-202ENST00000372621 BAG4O95429 457 aaKnown RBP15.73■□□□□ 0.11
CTPS1-202ENST00000372621 FAM208AQ9UK61 1670 aaKnown RBP15.73■□□□□ 0.11
CTPS1-202ENST00000372621 XRN1Q8IZH2 1706 aaKnown RBP15.72■□□□□ 0.11
CTPS1-202ENST00000372621 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
CTPS1-202ENST00000372621 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
CTPS1-202ENST00000372621 IGSF1Q8N6C5 1336 aa15.72■□□□□ 0.11
CTPS1-202ENST00000372621 CCT4P50991 539 aaKnown RBP15.72■□□□□ 0.11
CTPS1-202ENST00000372621 CLCN1P35523 988 aa15.72■□□□□ 0.11
CTPS1-202ENST00000372621 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
CTPS1-202ENST00000372621 CACNA1FO60840 1977 aa15.71■□□□□ 0.11
CTPS1-202ENST00000372621 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
CTPS1-202ENST00000372621 HMMRO75330 724 aa15.71■□□□□ 0.11
CTPS1-202ENST00000372621 CASC1Q6TDU7 716 aa15.71■□□□□ 0.11
CTPS1-202ENST00000372621 SALL3Q9BXA9 1300 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 KLHL40Q2TBA0 621 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 MARF1Q9Y4F3 1742 aaKnown RBP15.7■□□□□ 0.1
CTPS1-202ENST00000372621 F6X3S4 739 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 APBB1O00213 710 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 RTF1Q92541 710 aaKnown RBP15.7■□□□□ 0.1
CTPS1-202ENST00000372621 PDE1AP54750 535 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 NUCB2P80303 420 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 EYA1Q99502 592 aa15.7■□□□□ 0.1
CTPS1-202ENST00000372621 DIP2AQ14689 1571 aa15.69■□□□□ 0.1
CTPS1-202ENST00000372621 REC8O95072 547 aa15.69■□□□□ 0.1
CTPS1-202ENST00000372621 GOLGA6L22H0YM25 854 aa15.69■□□□□ 0.1
CTPS1-202ENST00000372621 SOX12O15370 315 aa15.69■□□□□ 0.1
CTPS1-202ENST00000372621 ERC2O15083 957 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
CTPS1-202ENST00000372621 CWC22Q9HCG8 908 aaKnown RBP15.68■□□□□ 0.1
CTPS1-202ENST00000372621 SLIT1O75093 1534 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 USP54Q70EL1 1684 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 ARHGAP23Q9P227 1491 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 SLC4A10Q6U841 1118 aa15.68■□□□□ 0.1
CTPS1-202ENST00000372621 ST18O60284 1047 aa15.67■□□□□ 0.1
CTPS1-202ENST00000372621 GNAI2P04899 355 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms