RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CPLX2Q6PUV4 134 aaKnown RBP16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 ATP10BO94823 1461 aa16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
RAPGEF1-202ENST00000372190 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 ANKRD62A6NC57 917 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 TDO2P48775 406 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 CFAP57Q96MR6 1250 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 ZKSCAN1P17029 563 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 SEPT6Q14141 434 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 TWISTNBQ3B726 338 aaPredicted RBP16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 PDILTQ8N807 584 aa16.64■□□□□ 0.25
RAPGEF1-202ENST00000372190 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 ANO2Q9NQ90 1003 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 STARD3NLO95772 234 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 IBSPP21815 317 aaPredicted RBP16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 CEP63Q96MT8 703 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 GNL3LQ9NVN8 582 aaKnown RBP16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 TBC1D2BQ9UPU7 963 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 NAIPQ13075 1403 aa16.63■□□□□ 0.25
RAPGEF1-202ENST00000372190 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 GNAI3P08754 354 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 MICALCLQ6ZW33 695 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 WDR62O43379 1518 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 NOS1P29475 1434 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 TRIM29Q14134 588 aa16.62■□□□□ 0.25
RAPGEF1-202ENST00000372190 A2MP01023 1474 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 ADGRF5Q8IZF2 1346 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 CCDC73Q6ZRK6 1079 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 SMARCE1Q969G3 411 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 EXOC5O00471 708 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 ZPR1O75312 459 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 HSPA2P54652 639 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 KIAA1328Q86T90 577 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 TIGD1Q96MW7 591 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
RAPGEF1-202ENST00000372190 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 OLFM4Q6UX06 510 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 CBX1P83916 185 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 HOMEZQ8IX15 550 aa16.6■□□□□ 0.25
RAPGEF1-202ENST00000372190 OFD1O75665 1012 aa16.59■□□□□ 0.25
RAPGEF1-202ENST00000372190 TAX1BP1Q86VP1 789 aa16.59■□□□□ 0.25
RAPGEF1-202ENST00000372190 CPLX1O14810 134 aa16.59■□□□□ 0.25
RAPGEF1-202ENST00000372190 SLC4A2P04920 1241 aa16.59■□□□□ 0.25
RAPGEF1-202ENST00000372190 TTC39AQ5SRH9 613 aa16.58■□□□□ 0.25
RAPGEF1-202ENST00000372190 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.25
RAPGEF1-202ENST00000372190 EXOSC9Q06265 439 aaKnown RBP16.58■□□□□ 0.25
RAPGEF1-202ENST00000372190 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.25
RAPGEF1-202ENST00000372190 C22orf23Q9BZE7 217 aa16.58■□□□□ 0.25
RAPGEF1-202ENST00000372190 CPSF2Q9P2I0 782 aaKnown RBP16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 ZNF652Q9Y2D9 606 aa16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 MNAT1P51948 309 aa16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 PPM1EQ8WY54 764 aa16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 GPATCH8Q9UKJ3 1502 aaKnown RBP16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 IKQ13123 557 aaPredicted RBP16.58■□□□□ 0.24
RAPGEF1-202ENST00000372190 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 NCOA1Q15788 1441 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC175P0C221 793 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 NME9Q86XW9 330 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 SUDS3Q9H7L9 328 aaPredicted RBP16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 FAM114A1Q8IWE2 563 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 RBM28Q9NW13 759 aaKnown RBP16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 ITSN2Q9NZM3 1697 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
RAPGEF1-202ENST00000372190 TRAK2O60296 914 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 AAMPQ13685 434 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC158Q5M9N0 1113 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 TRERF1Q96PN7 1200 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 SYCP2Q9BX26 1530 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 GBP2P32456 591 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 TMCO3Q6UWJ1 677 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 SARNPP82979 210 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 IQCEQ6IPM2 695 aa16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
RAPGEF1-202ENST00000372190 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 RNF214Q8ND24 703 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 CFAP45Q9UL16 551 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 CCDC57Q2TAC2 916 aa16.55■□□□□ 0.24
RAPGEF1-202ENST00000372190 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms