RNA–Protein interactions for RNA: ENST00000371786.3

C9orf116-201, Transcript of chromosome 9 open reading frame 116, humanhuman

TSL 2

Gene C9orf116, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf116-201ENST00000371786 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
C9orf116-201ENST00000371786 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
C9orf116-201ENST00000371786 WDR63Q8IWG1 891 aa23.36■■□□□ 1.33
C9orf116-201ENST00000371786 MEGF6O75095 1541 aa23.36■■□□□ 1.33
C9orf116-201ENST00000371786 GOLGA2Q08379 1002 aa23.35■■□□□ 1.33
C9orf116-201ENST00000371786 UNC5CLQ8IV45 518 aa23.35■■□□□ 1.33
C9orf116-201ENST00000371786 CDCA7LQ96GN5 454 aa23.34■■□□□ 1.33
C9orf116-201ENST00000371786 BCL9LQ86UU0 1499 aa23.34■■□□□ 1.33
C9orf116-201ENST00000371786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.33■■□□□ 1.33
C9orf116-201ENST00000371786 USP35Q9P2H5 1018 aa23.33■■□□□ 1.33
C9orf116-201ENST00000371786 IL2RBP14784 551 aa23.32■■□□□ 1.32
C9orf116-201ENST00000371786 SPG7Q9UQ90 795 aa23.32■■□□□ 1.32
C9orf116-201ENST00000371786 PARP4Q9UKK3 1724 aaKnown RBP23.32■■□□□ 1.32
C9orf116-201ENST00000371786 OVOS2A0A0G2JMS6 1433 aa23.32■■□□□ 1.32
C9orf116-201ENST00000371786 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
C9orf116-201ENST00000371786 ZNF530Q6P9A1 599 aaPredicted RBP23.31■■□□□ 1.32
C9orf116-201ENST00000371786 SPATA31A1Q5TZJ5 1347 aa23.31■■□□□ 1.32
C9orf116-201ENST00000371786 MAP3K5Q99683 1374 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 GNAT3A8MTJ3 354 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 SLFN5Q08AF3 891 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 USP21Q9UK80 565 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
C9orf116-201ENST00000371786 VPS72Q15906 364 aa23.29■■□□□ 1.32
C9orf116-201ENST00000371786 AKAP4Q5JQC9 854 aa23.29■■□□□ 1.32
C9orf116-201ENST00000371786 PKD1L3Q7Z443 1732 aa23.29■■□□□ 1.32
C9orf116-201ENST00000371786 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.29■■□□□ 1.32
C9orf116-201ENST00000371786 SPINK5Q9NQ38 1064 aaPredicted RBP23.29■■□□□ 1.32
C9orf116-201ENST00000371786 THRAP3Q9Y2W1 955 aaKnown RBP23.29■■□□□ 1.32
C9orf116-201ENST00000371786 IL16Q14005 1332 aa23.29■■□□□ 1.32
C9orf116-201ENST00000371786 E9PSI1 815 aa23.28■■□□□ 1.32
C9orf116-201ENST00000371786 DCTN1Q14203 1278 aa23.28■■□□□ 1.32
C9orf116-201ENST00000371786 TRMT2AQ8IZ69 625 aaKnown RBP23.28■■□□□ 1.32
C9orf116-201ENST00000371786 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
C9orf116-201ENST00000371786 THUMPD2Q9BTF0 503 aaKnown RBP23.28■■□□□ 1.32
C9orf116-201ENST00000371786 AFF2P51816 1311 aa23.28■■□□□ 1.32
C9orf116-201ENST00000371786 DISP2A7MBM2 1401 aa23.27■■□□□ 1.32
C9orf116-201ENST00000371786 CALD1Q05682 793 aaKnown RBP23.27■■□□□ 1.32
C9orf116-201ENST00000371786 C1orf141Q5JVX7 400 aa23.27■■□□□ 1.32
C9orf116-201ENST00000371786 MCM10Q7L590 875 aa23.27■■□□□ 1.32
C9orf116-201ENST00000371786 ZCRB1Q8TBF4 217 aaKnown RBP23.26■■□□□ 1.31
C9orf116-201ENST00000371786 CCDC9Q9Y3X0 531 aaKnown RBP23.26■■□□□ 1.31
C9orf116-201ENST00000371786 WNK3Q9BYP7 1800 aa23.25■■□□□ 1.31
C9orf116-201ENST00000371786 DUSP27Q5VZP5 1158 aa23.25■■□□□ 1.31
C9orf116-201ENST00000371786 IL17REQ8NFR9 667 aa23.24■■□□□ 1.31
C9orf116-201ENST00000371786 CDCA7Q9BWT1 371 aaPredicted RBP23.24■■□□□ 1.31
C9orf116-201ENST00000371786 PHKG2P15735 406 aa23.23■■□□□ 1.31
C9orf116-201ENST00000371786 BARGINQ6ZT62 677 aa23.23■■□□□ 1.31
C9orf116-201ENST00000371786 IFNL2Q8IZJ0 200 aa23.23■■□□□ 1.31
C9orf116-201ENST00000371786 CYP27B1O15528 508 aa23.22■■□□□ 1.31
C9orf116-201ENST00000371786 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
C9orf116-201ENST00000371786 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
C9orf116-201ENST00000371786 LGR6Q9HBX8 967 aa23.21■■□□□ 1.31
C9orf116-201ENST00000371786 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
C9orf116-201ENST00000371786 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
C9orf116-201ENST00000371786 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
C9orf116-201ENST00000371786 SHANK3Q9BYB0 1731 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 LRRC37A3O60309 1634 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 CEMIPQ8WUJ3 1361 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 RNMTO43148 476 aaKnown RBP23.2■■□□□ 1.3
C9orf116-201ENST00000371786 GNAI1P63096 354 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 MPRIPQ6WCQ1 1025 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
C9orf116-201ENST00000371786 ATRNO75882 1429 aa23.19■■□□□ 1.3
C9orf116-201ENST00000371786 LAS1LQ9Y4W2 734 aaKnown RBP23.19■■□□□ 1.3
C9orf116-201ENST00000371786 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
C9orf116-201ENST00000371786 EXOC5O00471 708 aa23.18■■□□□ 1.3
C9orf116-201ENST00000371786 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
C9orf116-201ENST00000371786 TRPC5Q9UL62 973 aaPredicted RBP23.18■■□□□ 1.3
C9orf116-201ENST00000371786 FANCIQ9NVI1 1328 aa23.17■■□□□ 1.3
C9orf116-201ENST00000371786 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
C9orf116-201ENST00000371786 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
C9orf116-201ENST00000371786 CHL1O00533 1208 aa23.16■■□□□ 1.3
C9orf116-201ENST00000371786 NKX1-1Q15270 411 aaPredicted RBP23.16■■□□□ 1.3
C9orf116-201ENST00000371786 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
C9orf116-201ENST00000371786 DCAF5Q96JK2 942 aa23.16■■□□□ 1.3
C9orf116-201ENST00000371786 GJD4Q96KN9 370 aaPredicted RBP23.16■■□□□ 1.3
C9orf116-201ENST00000371786 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
C9orf116-201ENST00000371786 SCN11AQ9UI33 1791 aa23.15■■□□□ 1.3
C9orf116-201ENST00000371786 FAM98CQ17RN3 349 aaKnown RBP23.15■■□□□ 1.3
C9orf116-201ENST00000371786 QTRT2Q9H974 415 aaKnown RBP23.15■■□□□ 1.3
C9orf116-201ENST00000371786 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
C9orf116-201ENST00000371786 GLI3P10071 1580 aa23.14■■□□□ 1.3
C9orf116-201ENST00000371786 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.29
C9orf116-201ENST00000371786 DDB1Q16531 1140 aa23.14■■□□□ 1.29
C9orf116-201ENST00000371786 MBIPQ9NS73 344 aa23.14■■□□□ 1.29
C9orf116-201ENST00000371786 TEFQ10587 303 aa23.13■■□□□ 1.29
C9orf116-201ENST00000371786 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
C9orf116-201ENST00000371786 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
C9orf116-201ENST00000371786 ZNF772Q68DY9 489 aaPredicted RBP23.1■■□□□ 1.29
C9orf116-201ENST00000371786 MIS18AQ9NYP9 233 aa23.1■■□□□ 1.29
C9orf116-201ENST00000371786 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
C9orf116-201ENST00000371786 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
C9orf116-201ENST00000371786 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
C9orf116-201ENST00000371786 THSD7AQ9UPZ6 1657 aa23.09■■□□□ 1.29
C9orf116-201ENST00000371786 SIPA1L3O60292 1781 aaPredicted RBP23.09■■□□□ 1.29
C9orf116-201ENST00000371786 MRC1P22897 1456 aa23.07■■□□□ 1.28
C9orf116-201ENST00000371786 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
C9orf116-201ENST00000371786 RCAN3Q9UKA8 241 aa23.07■■□□□ 1.28
C9orf116-201ENST00000371786 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms