RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 STK31Q9BXU1 1019 aa14.68□□□□□ -0.06
PDE6C-201ENST00000371447 SETD1BQ9UPS6 1966 aaKnown RBP14.68□□□□□ -0.06
PDE6C-201ENST00000371447 KIF20BQ96Q89 1820 aa14.68□□□□□ -0.06
PDE6C-201ENST00000371447 RBM42Q9BTD8 480 aaKnown RBP14.68□□□□□ -0.06
PDE6C-201ENST00000371447 CDC42BPGQ6DT37 1551 aa14.67□□□□□ -0.06
PDE6C-201ENST00000371447 UBE2Q2Q8WVN8 375 aa14.67□□□□□ -0.06
PDE6C-201ENST00000371447 EXOC6BQ9Y2D4 811 aa14.67□□□□□ -0.06
PDE6C-201ENST00000371447 ZC3H6P61129 1189 aaKnown RBP14.66□□□□□ -0.06
PDE6C-201ENST00000371447 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
PDE6C-201ENST00000371447 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.66□□□□□ -0.06
PDE6C-201ENST00000371447 MPRIPQ6WCQ1 1025 aa14.66□□□□□ -0.06
PDE6C-201ENST00000371447 TECPR2O15040 1411 aa14.65□□□□□ -0.06
PDE6C-201ENST00000371447 FLT4P35916 1363 aa14.65□□□□□ -0.06
PDE6C-201ENST00000371447 GNAT3A8MTJ3 354 aa14.65□□□□□ -0.06
PDE6C-201ENST00000371447 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
PDE6C-201ENST00000371447 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.65□□□□□ -0.06
PDE6C-201ENST00000371447 ABCC4O15439 1325 aa14.65□□□□□ -0.06
PDE6C-201ENST00000371447 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 NBPF6Q5VWK0 638 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 NBPF4Q96M43 638 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 MSH6P52701 1360 aa14.64□□□□□ -0.07
PDE6C-201ENST00000371447 TTC21AQ8NDW8 1320 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 KCNQ3O43525 872 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 HSCBQ8IWL3 235 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 CHMP4BQ9H444 224 aaKnown RBP14.63□□□□□ -0.07
PDE6C-201ENST00000371447 OVOS2A0A0J9YW53 1432 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 OVOS2Q6IE36 1432 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
PDE6C-201ENST00000371447 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
PDE6C-201ENST00000371447 PHAXQ9H814 394 aaKnown RBP14.63□□□□□ -0.07
PDE6C-201ENST00000371447 SETD1AO15047 1707 aaKnown RBP14.62□□□□□ -0.07
PDE6C-201ENST00000371447 UBR1Q8IWV7 1749 aa14.62□□□□□ -0.07
PDE6C-201ENST00000371447 GSE1Q14687 1217 aa14.62□□□□□ -0.07
PDE6C-201ENST00000371447 HSP90AB1P08238 724 aaKnown RBP14.62□□□□□ -0.07
PDE6C-201ENST00000371447 SBNO1A3KN83 1393 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 HDGFL1Q5TGJ6 251 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 PKNOX2Q96KN3 472 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 CEP85Q6P2H3 762 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 FLIIQ13045 1269 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 CABLES1Q8TDN4 633 aa14.61□□□□□ -0.07
PDE6C-201ENST00000371447 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
PDE6C-201ENST00000371447 ZNF530Q6P9A1 599 aaPredicted RBP14.6□□□□□ -0.07
PDE6C-201ENST00000371447 BRPF3Q9ULD4 1205 aa14.6□□□□□ -0.07
PDE6C-201ENST00000371447 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
PDE6C-201ENST00000371447 TEFQ10587 303 aa14.59□□□□□ -0.07
PDE6C-201ENST00000371447 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
PDE6C-201ENST00000371447 ANKRD26Q9UPS8 1709 aa14.59□□□□□ -0.07
PDE6C-201ENST00000371447 PLEKHM2Q8IWE5 1019 aa14.59□□□□□ -0.07
PDE6C-201ENST00000371447 HAP1P54257 671 aaPredicted RBP14.59□□□□□ -0.07
PDE6C-201ENST00000371447 NOL8Q76FK4 1167 aaKnown RBP14.59□□□□□ -0.07
PDE6C-201ENST00000371447 INTS3Q68E01 1043 aaKnown RBP14.58□□□□□ -0.07
PDE6C-201ENST00000371447 IGSF1Q8N6C5 1336 aa14.58□□□□□ -0.08
PDE6C-201ENST00000371447 CD2BP2O95400 341 aaKnown RBP14.58□□□□□ -0.08
PDE6C-201ENST00000371447 MAP4K4O95819 1239 aaPredicted RBP14.58□□□□□ -0.08
PDE6C-201ENST00000371447 BMP2KLQ5H9B9 411 aa14.58□□□□□ -0.08
PDE6C-201ENST00000371447 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
PDE6C-201ENST00000371447 AIMP1Q12904 312 aaKnown RBP14.58□□□□□ -0.08
PDE6C-201ENST00000371447 TAF7Q15545 349 aaPredicted RBP14.58□□□□□ -0.08
PDE6C-201ENST00000371447 CCDC30Q5VVM6 783 aa14.58□□□□□ -0.08
PDE6C-201ENST00000371447 RILPL2Q969X0 211 aa14.58□□□□□ -0.08
PDE6C-201ENST00000371447 CEP170BQ9Y4F5 1589 aaPredicted RBP14.57□□□□□ -0.08
PDE6C-201ENST00000371447 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
PDE6C-201ENST00000371447 ANKRD44Q8N8A2 993 aa14.57□□□□□ -0.08
PDE6C-201ENST00000371447 DCTPP1Q9H773 170 aa14.57□□□□□ -0.08
PDE6C-201ENST00000371447 LRRFIP2Q9Y608 721 aaKnown RBP14.57□□□□□ -0.08
PDE6C-201ENST00000371447 USP31Q70CQ4 1352 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 PNMA6EA0A0J9YXQ4 647 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 GCP02774 474 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 HSPA2P54652 639 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 RIMS1Q86UR5 1692 aaKnown RBP14.56□□□□□ -0.08
PDE6C-201ENST00000371447 PTCH1Q13635 1447 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 PRAMEF22A3QJZ6 481 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 PIP4K2AP48426 406 aaPredicted RBP14.56□□□□□ -0.08
PDE6C-201ENST00000371447 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
PDE6C-201ENST00000371447 CRB1P82279 1406 aa14.55□□□□□ -0.08
PDE6C-201ENST00000371447 CDC45O75419 566 aa14.55□□□□□ -0.08
PDE6C-201ENST00000371447 GNAI2P04899 355 aa14.55□□□□□ -0.08
PDE6C-201ENST00000371447 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
PDE6C-201ENST00000371447 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
PDE6C-201ENST00000371447 SDSP20132 328 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 FOXD4L5Q5VV16 416 aaPredicted RBP14.54□□□□□ -0.08
PDE6C-201ENST00000371447 FOXD4L4Q8WXT5 416 aaPredicted RBP14.54□□□□□ -0.08
PDE6C-201ENST00000371447 AXIN2Q9Y2T1 843 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 RGPD8O14715 1765 aaPredicted RBP14.54□□□□□ -0.08
PDE6C-201ENST00000371447 DIP2AQ14689 1571 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 RTL1A6NKG5 1358 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 ARHGEF10O15013 1369 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 BTBD11A6QL63 1104 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
PDE6C-201ENST00000371447 HMMRO75330 724 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 C1orf141Q5JVX7 400 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 KRT28Q7Z3Y7 464 aa14.54□□□□□ -0.08
PDE6C-201ENST00000371447 PTPRCP08575 1304 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms