RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 ANKRD24Q8TF21 1146 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 ABCC11Q96J66 1382 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 WDR7Q9Y4E6 1490 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 RABEP1Q15276 862 aa17.59■□□□□ 0.41
NDC1-201ENST00000371429 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
NDC1-201ENST00000371429 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.41
NDC1-201ENST00000371429 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.41
NDC1-201ENST00000371429 ZNF518AQ6AHZ1 1483 aa17.58■□□□□ 0.4
NDC1-201ENST00000371429 TRIM22Q8IYM9 498 aa17.58■□□□□ 0.4
NDC1-201ENST00000371429 C11orf95C9JLR9 678 aaPredicted RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 IFIT1P09914 478 aaKnown RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 CCAR2Q8N163 923 aaKnown RBP17.57■□□□□ 0.4
NDC1-201ENST00000371429 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 AKAP2Q9Y2D5 859 aa17.57■□□□□ 0.4
NDC1-201ENST00000371429 HSPA2P54652 639 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CCDC69A6NI79 296 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CAVIN4Q5BKX8 364 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
NDC1-201ENST00000371429 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
NDC1-201ENST00000371429 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 IFIT5Q13325 482 aaKnown RBP17.55■□□□□ 0.4
NDC1-201ENST00000371429 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 GOLGA6L1Q8N7Z2 621 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 ANKRD1Q15327 319 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
NDC1-201ENST00000371429 TXLNAP40222 546 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 UBAC1Q9BSL1 405 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 NSD2O96028 1365 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 AIDAQ96BJ3 306 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 AK7Q96M32 723 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 ZBTB3Q9H5J0 574 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
NDC1-201ENST00000371429 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
NDC1-201ENST00000371429 GPTP24298 496 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 STK3Q13188 491 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 NUTM1Q86Y26 1132 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
NDC1-201ENST00000371429 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
NDC1-201ENST00000371429 BLOC1S2Q6QNY1 142 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 ARID3AQ99856 593 aa17.53■□□□□ 0.4
NDC1-201ENST00000371429 A0A087WZG4 1122 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 F6X3S4 739 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 RIMS2Q9UQ26 1411 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 EPS15P42566 896 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 STK38Q15208 465 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 TTC21AQ8NDW8 1320 aa17.52■□□□□ 0.4
NDC1-201ENST00000371429 GSE1Q14687 1217 aa17.52■□□□□ 0.39
NDC1-201ENST00000371429 UNC13AQ9UPW8 1703 aa17.51■□□□□ 0.39
NDC1-201ENST00000371429 ZNF396Q96N95 335 aaPredicted RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
NDC1-201ENST00000371429 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 KRT18P05783 430 aaKnown RBP17.51■□□□□ 0.39
NDC1-201ENST00000371429 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 OFD1O75665 1012 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 CCDC70Q6NSX1 233 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 NAT10Q9H0A0 1025 aaKnown RBP17.5■□□□□ 0.39
NDC1-201ENST00000371429 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 FANCIQ9NVI1 1328 aa17.5■□□□□ 0.39
NDC1-201ENST00000371429 RARSP54136 660 aaKnown RBP17.5■□□□□ 0.39
NDC1-201ENST00000371429 SYCP2Q9BX26 1530 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 C8orf37Q96NL8 207 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
NDC1-201ENST00000371429 CT47A1Q5JQC4 288 aaPredicted RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 CEBPZQ03701 1054 aaKnown RBP17.49■□□□□ 0.39
NDC1-201ENST00000371429 FBLN1P23142 703 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 FLIIQ13045 1269 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 KRT32Q14532 448 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
NDC1-201ENST00000371429 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ABCC10Q5T3U5 1492 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 ANKRD36BQ8N2N9 1353 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 USP5P45974 858 aa17.48■□□□□ 0.39
NDC1-201ENST00000371429 RFC4P35249 363 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 ZNF592Q92610 1267 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 FIBPO43427 364 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 IMMTQ16891 758 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 WWC2Q6AWC2 1192 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 DZIP1Q86YF9 867 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 ZNF287Q9HBT7 754 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms