RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RGPD5Q99666 1765 aa14.57□□□□□ -0.08
EXOSC1-203ENST00000370886 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
EXOSC1-203ENST00000370886 RRS1Q15050 365 aaKnown RBP14.57□□□□□ -0.08
EXOSC1-203ENST00000370886 GPR162Q16538 588 aa14.57□□□□□ -0.08
EXOSC1-203ENST00000370886 MON2Q7Z3U7 1717 aa14.56□□□□□ -0.08
EXOSC1-203ENST00000370886 PER1O15534 1290 aaPredicted RBP14.56□□□□□ -0.08
EXOSC1-203ENST00000370886 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
EXOSC1-203ENST00000370886 AMPHP49418 695 aa14.55□□□□□ -0.08
EXOSC1-203ENST00000370886 ARHGEF25Q86VW2 580 aa14.55□□□□□ -0.08
EXOSC1-203ENST00000370886 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
EXOSC1-203ENST00000370886 ABCC6O95255 1503 aa14.55□□□□□ -0.08
EXOSC1-203ENST00000370886 LTV1Q96GA3 475 aaPredicted RBP14.54□□□□□ -0.08
EXOSC1-203ENST00000370886 CEP350Q5VT06 3117 aa14.54□□□□□ -0.08
EXOSC1-203ENST00000370886 BTAF1O14981 1849 aa14.53□□□□□ -0.08
EXOSC1-203ENST00000370886 QSER1Q2KHR3 1735 aa14.53□□□□□ -0.08
EXOSC1-203ENST00000370886 MAP3K19Q56UN5 1328 aa14.52□□□□□ -0.08
EXOSC1-203ENST00000370886 POLD1P28340 1107 aa14.52□□□□□ -0.09
EXOSC1-203ENST00000370886 KLHL34Q8N239 644 aa14.52□□□□□ -0.09
EXOSC1-203ENST00000370886 SLC16A10Q8TF71 515 aa14.52□□□□□ -0.09
EXOSC1-203ENST00000370886 NSD2O96028 1365 aa14.51□□□□□ -0.09
EXOSC1-203ENST00000370886 EMILIN1Q9Y6C2 1016 aa14.51□□□□□ -0.09
EXOSC1-203ENST00000370886 GOLGB1Q14789 3259 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-203ENST00000370886 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
EXOSC1-203ENST00000370886 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
EXOSC1-203ENST00000370886 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
EXOSC1-203ENST00000370886 NFAT5O94916 1531 aa14.5□□□□□ -0.09
EXOSC1-203ENST00000370886 ZNF827Q17R98 1081 aa14.49□□□□□ -0.09
EXOSC1-203ENST00000370886 IP6K1Q92551 441 aa14.49□□□□□ -0.09
EXOSC1-203ENST00000370886 COL24A1Q17RW2 1714 aa14.49□□□□□ -0.09
EXOSC1-203ENST00000370886 HOXC9P31274 260 aa14.48□□□□□ -0.09
EXOSC1-203ENST00000370886 ANKRD24Q8TF21 1146 aa14.48□□□□□ -0.09
EXOSC1-203ENST00000370886 NLRP2Q9NX02 1062 aa14.48□□□□□ -0.09
EXOSC1-203ENST00000370886 POLKQ9UBT6 870 aa14.48□□□□□ -0.09
EXOSC1-203ENST00000370886 IL2RBP14784 551 aa14.47□□□□□ -0.09
EXOSC1-203ENST00000370886 HSP90AB2PQ58FF8 381 aa14.47□□□□□ -0.09
EXOSC1-203ENST00000370886 SLC27A3Q5K4L6 730 aa14.47□□□□□ -0.09
EXOSC1-203ENST00000370886 ERBB3P21860 1342 aa14.46□□□□□ -0.09
EXOSC1-203ENST00000370886 GRIN3BO60391 1043 aa14.46□□□□□ -0.09
EXOSC1-203ENST00000370886 MTHFSP49914 203 aa14.45□□□□□ -0.1
EXOSC1-203ENST00000370886 LRRC4BQ9NT99 713 aa14.45□□□□□ -0.1
EXOSC1-203ENST00000370886 TUBGCP6Q96RT7 1819 aa14.44□□□□□ -0.1
EXOSC1-203ENST00000370886 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
EXOSC1-203ENST00000370886 NPC1L1Q9UHC9 1359 aa14.44□□□□□ -0.1
EXOSC1-203ENST00000370886 LTN1O94822 1766 aa14.43□□□□□ -0.1
EXOSC1-203ENST00000370886 FLT4P35916 1363 aa14.43□□□□□ -0.1
EXOSC1-203ENST00000370886 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
EXOSC1-203ENST00000370886 USP54Q70EL1 1684 aa14.42□□□□□ -0.1
EXOSC1-203ENST00000370886 PNPLA7Q6ZV29 1317 aa14.42□□□□□ -0.1
EXOSC1-203ENST00000370886 PPP2R1AP30153 589 aa14.42□□□□□ -0.1
EXOSC1-203ENST00000370886 NLGN2Q8NFZ4 835 aa14.42□□□□□ -0.1
EXOSC1-203ENST00000370886 TFCP2L1Q9NZI6 479 aa14.42□□□□□ -0.1
EXOSC1-203ENST00000370886 USHBP1Q8N6Y0 703 aa14.41□□□□□ -0.1
EXOSC1-203ENST00000370886 RTL1A6NKG5 1358 aa14.41□□□□□ -0.1
EXOSC1-203ENST00000370886 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
EXOSC1-203ENST00000370886 FAM208AQ9UK61 1670 aaKnown RBP14.4□□□□□ -0.1
EXOSC1-203ENST00000370886 SMG6Q86US8 1419 aaKnown RBP14.4□□□□□ -0.1
EXOSC1-203ENST00000370886 INSRP06213 1382 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 LY75O60449 1722 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 RALBP1Q15311 655 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 CFAP53Q96M91 514 aa14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 GPBP1L1Q9HC44 474 aaPredicted RBP14.39□□□□□ -0.11
EXOSC1-203ENST00000370886 ANP32CO43423 234 aa14.38□□□□□ -0.11
EXOSC1-203ENST00000370886 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.114e-8■□□□□ 10.7
EXOSC1-203ENST00000370886 DOT1LQ8TEK3 1739 aa14.38□□□□□ -0.11
EXOSC1-203ENST00000370886 KIF24Q5T7B8 1368 aa14.37□□□□□ -0.11
EXOSC1-203ENST00000370886 U2SURPO15042 1029 aaKnown RBP14.37□□□□□ -0.11
EXOSC1-203ENST00000370886 DIAPH1O60610 1272 aaKnown RBP14.37□□□□□ -0.11
EXOSC1-203ENST00000370886 HSPA6P17066 643 aa14.37□□□□□ -0.11
EXOSC1-203ENST00000370886 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
EXOSC1-203ENST00000370886 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
EXOSC1-203ENST00000370886 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
EXOSC1-203ENST00000370886 MSH5O43196 834 aa14.35□□□□□ -0.11
EXOSC1-203ENST00000370886 EYA1Q99502 592 aa14.35□□□□□ -0.11
EXOSC1-203ENST00000370886 HMGB2P26583 209 aaKnown RBP14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 IL13P35225 146 aa14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 RAPGEF4Q8WZA2 1011 aa14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 MYBBP1AQ9BQG0 1328 aaKnown RBP14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 ADCY9O60503 1353 aa14.34□□□□□ -0.11
EXOSC1-203ENST00000370886 PRIM1P49642 420 aaKnown RBP14.33□□□□□ -0.12
EXOSC1-203ENST00000370886 HMOX1P09601 288 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 KCNQ4P56696 695 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 NUDCQ9Y266 331 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 ANKRD26Q9UPS8 1709 aa14.32□□□□□ -0.12
EXOSC1-203ENST00000370886 TATP17735 454 aaPredicted RBP14.31□□□□□ -0.12
EXOSC1-203ENST00000370886 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
EXOSC1-203ENST00000370886 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 FLAD1Q8NFF5 587 aa14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 ZNF526Q8TF50 670 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 C5P01031 1676 aa14.3□□□□□ -0.12
EXOSC1-203ENST00000370886 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
EXOSC1-203ENST00000370886 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms