RNA–Protein interactions for RNA: ENST00000370850.6

HMGCLL1-203, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-203ENST00000370850 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
HMGCLL1-203ENST00000370850 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
HMGCLL1-203ENST00000370850 MTHFSP49914 203 aa18.41■□□□□ 0.54
HMGCLL1-203ENST00000370850 EYA1Q99502 592 aa18.41■□□□□ 0.54
HMGCLL1-203ENST00000370850 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
HMGCLL1-203ENST00000370850 FAM182BQ5T319 152 aa18.4■□□□□ 0.54
HMGCLL1-203ENST00000370850 USHBP1Q8N6Y0 703 aa18.4■□□□□ 0.54
HMGCLL1-203ENST00000370850 MARCH10Q8NA82 808 aaPredicted RBP18.4■□□□□ 0.54
HMGCLL1-203ENST00000370850 DDX10Q13206 875 aaKnown RBP18.39■□□□□ 0.53
HMGCLL1-203ENST00000370850 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.53
HMGCLL1-203ENST00000370850 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
HMGCLL1-203ENST00000370850 IL13P35225 146 aa18.38■□□□□ 0.53
HMGCLL1-203ENST00000370850 NHSQ6T4R5 1651 aa18.37■□□□□ 0.53
HMGCLL1-203ENST00000370850 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
HMGCLL1-203ENST00000370850 KDRP35968 1356 aa18.36■□□□□ 0.53
HMGCLL1-203ENST00000370850 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
HMGCLL1-203ENST00000370850 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
HMGCLL1-203ENST00000370850 SF3B2Q13435 895 aaKnown RBP18.35■□□□□ 0.53
HMGCLL1-203ENST00000370850 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
HMGCLL1-203ENST00000370850 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
HMGCLL1-203ENST00000370850 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
HMGCLL1-203ENST00000370850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.34■□□□□ 0.53
HMGCLL1-203ENST00000370850 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
HMGCLL1-203ENST00000370850 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
HMGCLL1-203ENST00000370850 DIAPH1O60610 1272 aaKnown RBP18.33■□□□□ 0.52
HMGCLL1-203ENST00000370850 RALBP1Q15311 655 aa18.33■□□□□ 0.52
HMGCLL1-203ENST00000370850 TRIM37O94972 964 aa18.32■□□□□ 0.52
HMGCLL1-203ENST00000370850 CFAP53Q96M91 514 aa18.32■□□□□ 0.52
HMGCLL1-203ENST00000370850 DOT1LQ8TEK3 1739 aa18.32■□□□□ 0.52
HMGCLL1-203ENST00000370850 BAG6P46379 1132 aa18.31■□□□□ 0.52
HMGCLL1-203ENST00000370850 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
HMGCLL1-203ENST00000370850 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
HMGCLL1-203ENST00000370850 SPG7Q9UQ90 795 aa18.3■□□□□ 0.52
HMGCLL1-203ENST00000370850 RREB1Q92766 1687 aa18.28■□□□□ 0.52
HMGCLL1-203ENST00000370850 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
HMGCLL1-203ENST00000370850 AEBP1Q8IUX7 1158 aa18.28■□□□□ 0.52
HMGCLL1-203ENST00000370850 CYP27B1O15528 508 aa18.27■□□□□ 0.52
HMGCLL1-203ENST00000370850 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
HMGCLL1-203ENST00000370850 TOGARAM1Q9Y4F4 1720 aa18.26■□□□□ 0.51
HMGCLL1-203ENST00000370850 APBA3O96018 575 aa18.26■□□□□ 0.51
HMGCLL1-203ENST00000370850 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
HMGCLL1-203ENST00000370850 AMOTQ4VCS5 1084 aa18.26■□□□□ 0.51
HMGCLL1-203ENST00000370850 BTAF1O14981 1849 aa18.26■□□□□ 0.51
HMGCLL1-203ENST00000370850 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
HMGCLL1-203ENST00000370850 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
HMGCLL1-203ENST00000370850 PLSCR1O15162 318 aa18.24■□□□□ 0.51
HMGCLL1-203ENST00000370850 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
HMGCLL1-203ENST00000370850 CAMKK2Q96RR4 588 aa18.24■□□□□ 0.51
HMGCLL1-203ENST00000370850 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
HMGCLL1-203ENST00000370850 PHKG2P15735 406 aa18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 IFNL2Q8IZJ0 200 aa18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 NUP188Q5SRE5 1749 aa18.23■□□□□ 0.51
HMGCLL1-203ENST00000370850 KCNQ2O43526 872 aa18.22■□□□□ 0.51
HMGCLL1-203ENST00000370850 PTF1AQ7RTS3 328 aa18.22■□□□□ 0.51
HMGCLL1-203ENST00000370850 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-203ENST00000370850 HMOX1P09601 288 aa18.21■□□□□ 0.51
HMGCLL1-203ENST00000370850 ITGB4P16144 1822 aa18.21■□□□□ 0.51
HMGCLL1-203ENST00000370850 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
HMGCLL1-203ENST00000370850 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
HMGCLL1-203ENST00000370850 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
HMGCLL1-203ENST00000370850 ADAMTS7Q9UKP4 1686 aa18.18■□□□□ 0.5
HMGCLL1-203ENST00000370850 LY75O60449 1722 aa18.18■□□□□ 0.5
HMGCLL1-203ENST00000370850 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-203ENST00000370850 RSPH6AQ9H0K4 717 aa18.18■□□□□ 0.5
HMGCLL1-203ENST00000370850 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
HMGCLL1-203ENST00000370850 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
HMGCLL1-203ENST00000370850 DCAF5Q96JK2 942 aa18.17■□□□□ 0.5
HMGCLL1-203ENST00000370850 SCN11AQ9UI33 1791 aa18.17■□□□□ 0.5
HMGCLL1-203ENST00000370850 FCHSD2O94868 740 aa18.16■□□□□ 0.5
HMGCLL1-203ENST00000370850 U2AF1L5P0DN76 240 aaPredicted RBP18.16■□□□□ 0.5
HMGCLL1-203ENST00000370850 U2AF1Q01081 240 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGCLL1-203ENST00000370850 AKAP4Q5JQC9 854 aa18.16■□□□□ 0.5
HMGCLL1-203ENST00000370850 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
HMGCLL1-203ENST00000370850 PAPPAQ13219 1627 aa18.15■□□□□ 0.5
HMGCLL1-203ENST00000370850 MRC1P22897 1456 aa18.14■□□□□ 0.5
HMGCLL1-203ENST00000370850 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.49
HMGCLL1-203ENST00000370850 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
HMGCLL1-203ENST00000370850 MTHFSDQ2M296 383 aaKnown RBP18.14■□□□□ 0.49
HMGCLL1-203ENST00000370850 GAS2L2Q8NHY3 880 aa18.14■□□□□ 0.49
HMGCLL1-203ENST00000370850 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.49
HMGCLL1-203ENST00000370850 VIRMAQ69YN4 1812 aaKnown RBP18.13■□□□□ 0.49
HMGCLL1-203ENST00000370850 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
HMGCLL1-203ENST00000370850 PROM2Q8N271 834 aa18.12■□□□□ 0.49
HMGCLL1-203ENST00000370850 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
HMGCLL1-203ENST00000370850 MPRIPQ6WCQ1 1025 aa18.11■□□□□ 0.49
HMGCLL1-203ENST00000370850 PIGBQ92521 554 aa18.11■□□□□ 0.49
HMGCLL1-203ENST00000370850 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
HMGCLL1-203ENST00000370850 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
HMGCLL1-203ENST00000370850 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
HMGCLL1-203ENST00000370850 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
HMGCLL1-203ENST00000370850 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
HMGCLL1-203ENST00000370850 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
HMGCLL1-203ENST00000370850 PNNQ9H307 717 aaKnown RBP18.09■□□□□ 0.49
HMGCLL1-203ENST00000370850 ANP32CO43423 234 aa18.08■□□□□ 0.48
HMGCLL1-203ENST00000370850 PLEKHF1Q96S99 279 aa18.08■□□□□ 0.48
HMGCLL1-203ENST00000370850 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
HMGCLL1-203ENST00000370850 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 293.5 ms