RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 RTF1Q92541 710 aaKnown RBP26.4■■□□□ 1.82
SOX3-201ENST00000370536 GAS2L2Q8NHY3 880 aa26.39■■□□□ 1.81
SOX3-201ENST00000370536 LTV1Q96GA3 475 aaPredicted RBP26.39■■□□□ 1.81
SOX3-201ENST00000370536 API5Q9BZZ5 524 aaKnown RBP26.39■■□□□ 1.81
SOX3-201ENST00000370536 KIAA0232Q92628 1395 aa26.38■■□□□ 1.81
SOX3-201ENST00000370536 SEC24BO95487 1268 aa26.38■■□□□ 1.81
SOX3-201ENST00000370536 PSME1Q06323 249 aa26.38■■□□□ 1.81
SOX3-201ENST00000370536 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
SOX3-201ENST00000370536 NWD1Q149M9 1564 aa26.36■■□□□ 1.81
SOX3-201ENST00000370536 CHMP4BQ9H444 224 aaKnown RBP26.36■■□□□ 1.81
SOX3-201ENST00000370536 C1orf115Q9H7X2 142 aa26.36■■□□□ 1.81
SOX3-201ENST00000370536 HAP1P54257 671 aaPredicted RBP26.35■■□□□ 1.81
SOX3-201ENST00000370536 USP19O94966 1318 aa26.35■■□□□ 1.81
SOX3-201ENST00000370536 TSPYL4Q9UJ04 414 aa26.33■■□□□ 1.81
SOX3-201ENST00000370536 RTL1A6NKG5 1358 aa26.33■■□□□ 1.81
SOX3-201ENST00000370536 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
SOX3-201ENST00000370536 NFAT5O94916 1531 aa26.3■■□□□ 1.8
SOX3-201ENST00000370536 SLC4A3P48751 1232 aa26.3■■□□□ 1.8
SOX3-201ENST00000370536 NUCB1Q02818 461 aa26.3■■□□□ 1.8
SOX3-201ENST00000370536 USHBP1Q8N6Y0 703 aa26.3■■□□□ 1.8
SOX3-201ENST00000370536 IP6K1Q92551 441 aa26.3■■□□□ 1.8
SOX3-201ENST00000370536 HTATSF1O43719 755 aaKnown RBP26.29■■□□□ 1.8
SOX3-201ENST00000370536 GNAT3A8MTJ3 354 aa26.29■■□□□ 1.8
SOX3-201ENST00000370536 LTN1O94822 1766 aa26.28■■□□□ 1.8
SOX3-201ENST00000370536 XPCQ01831 940 aaPredicted RBP26.28■■□□□ 1.8
SOX3-201ENST00000370536 DAXXQ9UER7 740 aaPredicted RBP26.28■■□□□ 1.8
SOX3-201ENST00000370536 RGS12O14924 1447 aa26.28■■□□□ 1.8
SOX3-201ENST00000370536 ZBTB7CA1YPR0 619 aa26.27■■□□□ 1.8
SOX3-201ENST00000370536 PROSER2Q86WR7 435 aaPredicted RBP26.27■■□□□ 1.8
SOX3-201ENST00000370536 SIRT2Q8IXJ6 389 aa26.27■■□□□ 1.8
SOX3-201ENST00000370536 INTS3Q68E01 1043 aaKnown RBP26.26■■□□□ 1.79
SOX3-201ENST00000370536 LNPKQ9C0E8 428 aa26.26■■□□□ 1.79
SOX3-201ENST00000370536 KCNH5Q8NCM2 988 aa26.26■■□□□ 1.79
SOX3-201ENST00000370536 MAP3K5Q99683 1374 aa26.25■■□□□ 1.79
SOX3-201ENST00000370536 SLC4A2P04920 1241 aa26.24■■□□□ 1.79
SOX3-201ENST00000370536 CHD1LQ86WJ1 897 aa26.24■■□□□ 1.79
SOX3-201ENST00000370536 PTPRCP08575 1304 aa26.24■■□□□ 1.79
SOX3-201ENST00000370536 MSH6P52701 1360 aa26.24■■□□□ 1.79
SOX3-201ENST00000370536 LRRC37A3O60309 1634 aa26.24■■□□□ 1.79
SOX3-201ENST00000370536 IL17REQ8NFR9 667 aa26.23■■□□□ 1.79
SOX3-201ENST00000370536 GCC1Q96CN9 775 aa26.23■■□□□ 1.79
SOX3-201ENST00000370536 PLEKHG5O94827 1062 aa26.22■■□□□ 1.79
SOX3-201ENST00000370536 NBPF6Q5VWK0 638 aa26.22■■□□□ 1.79
SOX3-201ENST00000370536 NBPF4Q96M43 638 aa26.22■■□□□ 1.79
SOX3-201ENST00000370536 DNAJC5Q9H3Z4 198 aa26.22■■□□□ 1.79
SOX3-201ENST00000370536 IL27Q8NEV9 243 aa26.21■■□□□ 1.79
SOX3-201ENST00000370536 ANKRD45Q5TZF3 282 aa26.21■■□□□ 1.79
SOX3-201ENST00000370536 UPF2Q9HAU5 1272 aaKnown RBP26.2■■□□□ 1.79
SOX3-201ENST00000370536 LMOD2Q6P5Q4 547 aa26.2■■□□□ 1.78
SOX3-201ENST00000370536 GCP02774 474 aa26.19■■□□□ 1.78
SOX3-201ENST00000370536 G2E3Q7L622 706 aa26.19■■□□□ 1.78
SOX3-201ENST00000370536 NFKBIBQ15653 356 aa26.18■■□□□ 1.78
SOX3-201ENST00000370536 GSE1Q14687 1217 aa26.17■■□□□ 1.78
SOX3-201ENST00000370536 LRRC59Q96AG4 307 aaKnown RBP26.17■■□□□ 1.78
SOX3-201ENST00000370536 TBC1D32Q96NH3 1257 aa26.17■■□□□ 1.78
SOX3-201ENST00000370536 C1orf167Q5SNV9 1468 aa26.16■■□□□ 1.78
SOX3-201ENST00000370536 TAF7Q15545 349 aaPredicted RBP26.16■■□□□ 1.78
SOX3-201ENST00000370536 KRT28Q7Z3Y7 464 aa26.16■■□□□ 1.78
SOX3-201ENST00000370536 ARHGEF25Q86VW2 580 aa26.16■■□□□ 1.78
SOX3-201ENST00000370536 C19orf44Q9H6X5 657 aa26.16■■□□□ 1.78
SOX3-201ENST00000370536 SLIT3O75094 1523 aa26.15■■□□□ 1.78
SOX3-201ENST00000370536 PHRF1Q9P1Y6 1649 aaKnown RBP26.15■■□□□ 1.78
SOX3-201ENST00000370536 F6X3S4 739 aa26.13■■□□□ 1.77
SOX3-201ENST00000370536 MEIS3Q99687 375 aa26.13■■□□□ 1.77
SOX3-201ENST00000370536 STK31Q9BXU1 1019 aa26.13■■□□□ 1.77
SOX3-201ENST00000370536 ATP10DQ9P241 1426 aa26.13■■□□□ 1.77
SOX3-201ENST00000370536 BABAM1Q9NWV8 329 aa26.12■■□□□ 1.77
SOX3-201ENST00000370536 ANKRD44Q8N8A2 993 aa26.12■■□□□ 1.77
SOX3-201ENST00000370536 NECTIN2Q92692 538 aa26.12■■□□□ 1.77
SOX3-201ENST00000370536 TRPM3Q9HCF6 1732 aaPredicted RBP26.12■■□□□ 1.77
SOX3-201ENST00000370536 CCDC30Q5VVM6 783 aa26.11■■□□□ 1.77
SOX3-201ENST00000370536 SLC4A10Q6U841 1118 aa26.11■■□□□ 1.77
SOX3-201ENST00000370536 RGPD2P0DJD1 1756 aa26.11■■□□□ 1.77
SOX3-201ENST00000370536 MFAP1P55081 439 aaKnown RBP26.11■■□□□ 1.77
SOX3-201ENST00000370536 CEMIPQ8WUJ3 1361 aa26.1■■□□□ 1.77
SOX3-201ENST00000370536 CEP85Q6P2H3 762 aa26.09■■□□□ 1.77
SOX3-201ENST00000370536 DCTPP1Q9H773 170 aa26.09■■□□□ 1.77
SOX3-201ENST00000370536 LGR6Q9HBX8 967 aa26.09■■□□□ 1.77
SOX3-201ENST00000370536 KIF1AQ12756 1690 aa26.08■■□□□ 1.77
SOX3-201ENST00000370536 RPAP2Q8IXW5 612 aaPredicted RBP26.08■■□□□ 1.77
SOX3-201ENST00000370536 ANKRD24Q8TF21 1146 aa26.08■■□□□ 1.77
SOX3-201ENST00000370536 TMEM94Q12767 1356 aa26.08■■□□□ 1.77
SOX3-201ENST00000370536 CCT4P50991 539 aaKnown RBP26.08■■□□□ 1.76
SOX3-201ENST00000370536 FLIIQ13045 1269 aa26.08■■□□□ 1.76
SOX3-201ENST00000370536 BMP2KLQ5H9B9 411 aa26.08■■□□□ 1.76
SOX3-201ENST00000370536 SOS1Q07889 1333 aaPredicted RBP26.07■■□□□ 1.76
SOX3-201ENST00000370536 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
SOX3-201ENST00000370536 ATF3P18847 181 aa26.06■■□□□ 1.76
SOX3-201ENST00000370536 ZNF530Q6P9A1 599 aaPredicted RBP26.06■■□□□ 1.76
SOX3-201ENST00000370536 AXIN2Q9Y2T1 843 aa26.06■■□□□ 1.76
SOX3-201ENST00000370536 BECN1Q14457 450 aa26.05■■□□□ 1.76
SOX3-201ENST00000370536 PLEKHO1Q53GL0 409 aaPredicted RBP26.05■■□□□ 1.76
SOX3-201ENST00000370536 C22orf23Q9BZE7 217 aa26.05■■□□□ 1.76
SOX3-201ENST00000370536 FKBP5Q13451 457 aaPredicted RBP26.05■■□□□ 1.76
SOX3-201ENST00000370536 MST1RQ04912 1400 aa26.04■■□□□ 1.76
SOX3-201ENST00000370536 MED1Q15648 1581 aaPredicted RBP26.03■■□□□ 1.76
SOX3-201ENST00000370536 AKAP4Q5JQC9 854 aa26.03■■□□□ 1.76
SOX3-201ENST00000370536 NCAPD2Q15021 1401 aa26.03■■□□□ 1.76
SOX3-201ENST00000370536 DDX17Q92841 729 aaKnown RBP26.03■■□□□ 1.76
SOX3-201ENST00000370536 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms