RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ARHGEF40Q8TER5 1519 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 MAP4K4O95819 1239 aaPredicted RBP13.41□□□□□ -0.26
LRIF1-201ENST00000369763 RNF214Q8ND24 703 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 NEK4P51957 841 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 LARP6Q9BRS8 491 aaKnown RBP13.41□□□□□ -0.26
LRIF1-201ENST00000369763 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
LRIF1-201ENST00000369763 ANP32BQ92688 251 aaKnown RBP13.4□□□□□ -0.26
LRIF1-201ENST00000369763 ARID3AQ99856 593 aa13.4□□□□□ -0.26
LRIF1-201ENST00000369763 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
LRIF1-201ENST00000369763 CASC1Q6TDU7 716 aa13.4□□□□□ -0.26
LRIF1-201ENST00000369763 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
LRIF1-201ENST00000369763 RABEP1Q15276 862 aa13.4□□□□□ -0.26
LRIF1-201ENST00000369763 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.27
LRIF1-201ENST00000369763 NCOA3Q9Y6Q9 1424 aa13.39□□□□□ -0.27
LRIF1-201ENST00000369763 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
LRIF1-201ENST00000369763 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
LRIF1-201ENST00000369763 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
LRIF1-201ENST00000369763 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
LRIF1-201ENST00000369763 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 PTCH1Q13635 1447 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 FKBP5Q13451 457 aaPredicted RBP13.38□□□□□ -0.27
LRIF1-201ENST00000369763 ANO2Q9NQ90 1003 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
LRIF1-201ENST00000369763 ST18O60284 1047 aa13.38□□□□□ -0.27
LRIF1-201ENST00000369763 MED14O60244 1454 aa13.37□□□□□ -0.27
LRIF1-201ENST00000369763 ACEP12821 1306 aa13.37□□□□□ -0.27
LRIF1-201ENST00000369763 DIP2CQ9Y2E4 1556 aa13.37□□□□□ -0.27
LRIF1-201ENST00000369763 PRIM1P49642 420 aaKnown RBP13.37□□□□□ -0.27
LRIF1-201ENST00000369763 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
LRIF1-201ENST00000369763 ZSCAN23Q3MJ62 389 aa13.37□□□□□ -0.27
LRIF1-201ENST00000369763 CPS1P31327 1500 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 SYCE3A1L190 88 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 CHL1O00533 1208 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 KLHL40Q2TBA0 621 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 RPAP2Q8IXW5 612 aaPredicted RBP13.36□□□□□ -0.27
LRIF1-201ENST00000369763 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
LRIF1-201ENST00000369763 PNMA6EA0A0J9YXQ4 647 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 AMPHP49418 695 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
LRIF1-201ENST00000369763 ERC2O15083 957 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 PDE1AP54750 535 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 LMBRD1Q9NUN5 540 aa13.35□□□□□ -0.27
LRIF1-201ENST00000369763 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
LRIF1-201ENST00000369763 USHBP1Q8N6Y0 703 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 ARHGAP31Q2M1Z3 1444 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 EDC4Q6P2E9 1401 aaKnown RBP13.34□□□□□ -0.27
LRIF1-201ENST00000369763 REC8O95072 547 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 NUCB2P80303 420 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 MAP3K19Q56UN5 1328 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 TTC21BQ7Z4L5 1316 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
LRIF1-201ENST00000369763 MSNP26038 577 aaKnown RBP13.34□□□□□ -0.27
LRIF1-201ENST00000369763 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 CFAP74Q9C0B2 1584 aa13.34□□□□□ -0.27
LRIF1-201ENST00000369763 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.27
LRIF1-201ENST00000369763 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.27
LRIF1-201ENST00000369763 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.27
LRIF1-201ENST00000369763 STK31Q9BXU1 1019 aa13.33□□□□□ -0.27
LRIF1-201ENST00000369763 HMMRO75330 724 aa13.33□□□□□ -0.28
LRIF1-201ENST00000369763 RBM10P98175 930 aaKnown RBP13.33□□□□□ -0.28
LRIF1-201ENST00000369763 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
LRIF1-201ENST00000369763 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
LRIF1-201ENST00000369763 TMEM131LA2VDJ0 1609 aa13.33□□□□□ -0.28
LRIF1-201ENST00000369763 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
LRIF1-201ENST00000369763 ATP10DQ9P241 1426 aa13.32□□□□□ -0.28
LRIF1-201ENST00000369763 XPCQ01831 940 aaPredicted RBP13.32□□□□□ -0.28
LRIF1-201ENST00000369763 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
LRIF1-201ENST00000369763 DDX54Q8TDD1 881 aaKnown RBP13.32□□□□□ -0.28
LRIF1-201ENST00000369763 ANXA1P04083 346 aa13.32□□□□□ -0.28
LRIF1-201ENST00000369763 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
LRIF1-201ENST00000369763 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
LRIF1-201ENST00000369763 GNAI2P04899 355 aa13.31□□□□□ -0.28
LRIF1-201ENST00000369763 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
LRIF1-201ENST00000369763 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
LRIF1-201ENST00000369763 NEO1Q92859 1461 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 IL25Q9H293 177 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 FLIIQ13045 1269 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 EYA1Q99502 592 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 LRRCC1Q9C099 1032 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
LRIF1-201ENST00000369763 A2ML1A8K2U0 1454 aa13.3□□□□□ -0.28
LRIF1-201ENST00000369763 MX1P20591 662 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 ROBO2Q9HCK4 1378 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 NLRP6P59044 892 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 RGS12O14924 1447 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 ATP7BP35670 1465 aa13.29□□□□□ -0.28
LRIF1-201ENST00000369763 PHAXQ9H814 394 aaKnown RBP13.29□□□□□ -0.28
LRIF1-201ENST00000369763 ISY1Q9ULR0 285 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms