RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PTMAP06454 111 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 GTF2E1P29083 439 aaPredicted RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 LTKP29376 864 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 MIS18AQ9NYP9 233 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 CAMSAP1Q5T5Y3 1602 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 FAM83GA6ND36 823 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 HIP1O00291 1037 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 RABEP1Q15276 862 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 ATP6V1DQ9Y5K8 247 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 MAP3K19Q56UN5 1328 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 NUCB2P80303 420 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 SYTL4Q96C24 671 aaPredicted RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 RBM33Q96EV2 1170 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 STRN4Q9NRL3 753 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 DBF4Q9UBU7 674 aaPredicted RBP6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 METP08581 1390 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 AATKQ6ZMQ8 1374 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 A2ML1A8K2U0 1454 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 GLI2P10070 1586 aa6.47□□□□□ -1.37
SMNDC1-202ENST00000369603 POLR1AO95602 1720 aaPredicted RBP6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 MCM2P49736 904 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 ABCA6Q8N139 1617 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 USHBP1Q8N6Y0 703 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 NCKAP5LQ9HCH0 1330 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 FLIIQ13045 1269 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 ANKRD24Q8TF21 1146 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 PHACTR3Q96KR7 559 aa6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 SPINK5Q9NQ38 1064 aaPredicted RBP6.46□□□□□ -1.37
SMNDC1-202ENST00000369603 KIAA1210Q9ULL0 1709 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 ZC3H13Q5T200 1668 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 AGLP35573 1532 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 RAB11FIP3O75154 756 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 VAMP4O75379 141 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 MRPL50Q8N5N7 158 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 FOXD4L1Q9NU39 408 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 BABAM1Q9NWV8 329 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 NEURL4Q96JN8 1562 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 PIK3R4Q99570 1358 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 SRGAP3O43295 1099 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 KIF6Q6ZMV9 814 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 HYPKQ9NX55 129 aa6.46□□□□□ -1.38
SMNDC1-202ENST00000369603 FRAT2O75474 233 aaPredicted RBP6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 IGHDP01880 384 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 LARP1Q6PKG0 1096 aaKnown RBP6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 IP6K1Q92551 441 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 TRIM35Q9UPQ4 493 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 HOXC9P31274 260 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 EYA1Q99502 592 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 MTHFSDQ2M296 383 aaKnown RBP6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 MPRIPQ6WCQ1 1025 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 NOL8Q76FK4 1167 aaKnown RBP6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 C8orf58Q8NAV2 365 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 DNAAF4Q8WXU2 420 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 ZNF521Q96K83 1311 aa6.45□□□□□ -1.38
SMNDC1-202ENST00000369603 PHF14O94880 888 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 TPRNQ4KMQ1 711 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 TRMT2AQ8IZ69 625 aaKnown RBP6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 DDX54Q8TDD1 881 aaKnown RBP6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 KIF1BPQ96EK5 621 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 PCDHB15Q9Y5E8 787 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 RIMBP3CA6NJZ7 1639 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 RIMBP3BA6NNM3 1639 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 RIMBP3Q9UFD9 1639 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 BMP2KLQ5H9B9 411 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 ARHGEF10O15013 1369 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 MAP3K5Q99683 1374 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 DEPDC5O75140 1603 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 VWDEQ8N2E2 1590 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 GCP02774 474 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 GNL2Q13823 731 aaKnown RBP6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 TMX4Q9H1E5 349 aaPredicted RBP6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 ALKQ9UM73 1620 aa6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
SMNDC1-202ENST00000369603 MYL6BP14649 208 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 PSMA5P28066 241 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 NUCB1Q02818 461 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 FMNL2Q96PY5 1086 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 GOLGA6L6A8MZA4 724 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 F6X3S4 739 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 VSIG10Q8N0Z9 540 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 NEUROD6Q96NK8 337 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 RBM42Q9BTD8 480 aaKnown RBP6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 FSD1Q9BTV5 496 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 ZBTB40Q9NUA8 1239 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 DDX49Q9Y6V7 483 aaKnown RBP6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 QRICH2Q9H0J4 1663 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 ROBO2Q9HCK4 1378 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 RLBP1P12271 317 aa6.43□□□□□ -1.38
SMNDC1-202ENST00000369603 NRXN1Q9ULB1 1477 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 CHL1O00533 1208 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 MX1P20591 662 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 SKAP1Q86WV1 359 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 ANKRD44Q8N8A2 993 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 EXOC6BQ9Y2D4 811 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 STARD3NLO95772 234 aa6.42□□□□□ -1.38
SMNDC1-202ENST00000369603 PLEKHF1Q96S99 279 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms