RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 PIK3C2AO00443 1686 aa19■□□□□ 0.63
PHTF1-202ENST00000369598 ZHX1Q9UKY1 873 aaPredicted RBP19■□□□□ 0.63
PHTF1-202ENST00000369598 R3HCC1Q9Y3T6 440 aaKnown RBP19■□□□□ 0.63
PHTF1-202ENST00000369598 SBNO1A3KN83 1393 aa18.99■□□□□ 0.63
PHTF1-202ENST00000369598 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
PHTF1-202ENST00000369598 FLT4P35916 1363 aa18.98■□□□□ 0.63
PHTF1-202ENST00000369598 ATF3P18847 181 aa18.98■□□□□ 0.63
PHTF1-202ENST00000369598 AEBP1Q8IUX7 1158 aa18.98■□□□□ 0.63
PHTF1-202ENST00000369598 RLBP1P12271 317 aa18.98■□□□□ 0.63
PHTF1-202ENST00000369598 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
PHTF1-202ENST00000369598 C22orf23Q9BZE7 217 aa18.97■□□□□ 0.63
PHTF1-202ENST00000369598 CHMP5Q9NZZ3 219 aa18.97■□□□□ 0.63
PHTF1-202ENST00000369598 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
PHTF1-202ENST00000369598 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
PHTF1-202ENST00000369598 EXOSC9Q06265 439 aaKnown RBP18.96■□□□□ 0.63
PHTF1-202ENST00000369598 PEAK1Q9H792 1746 aa18.96■□□□□ 0.63
PHTF1-202ENST00000369598 TMEM94Q12767 1356 aa18.96■□□□□ 0.63
PHTF1-202ENST00000369598 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
PHTF1-202ENST00000369598 LMOD2Q6P5Q4 547 aa18.95■□□□□ 0.62
PHTF1-202ENST00000369598 MPNDQ8N594 471 aa18.95■□□□□ 0.62
PHTF1-202ENST00000369598 CT47B1P0C2W7 299 aaPredicted RBP18.94■□□□□ 0.62
PHTF1-202ENST00000369598 HOXC9P31274 260 aa18.93■□□□□ 0.62
PHTF1-202ENST00000369598 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
PHTF1-202ENST00000369598 PDCL3Q9H2J4 239 aa18.93■□□□□ 0.62
PHTF1-202ENST00000369598 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
PHTF1-202ENST00000369598 HSCBQ8IWL3 235 aa18.92■□□□□ 0.62
PHTF1-202ENST00000369598 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
PHTF1-202ENST00000369598 KCNH5Q8NCM2 988 aa18.92■□□□□ 0.62
PHTF1-202ENST00000369598 PDE3AQ14432 1141 aa18.91■□□□□ 0.62
PHTF1-202ENST00000369598 EYA1Q99502 592 aa18.91■□□□□ 0.62
PHTF1-202ENST00000369598 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
PHTF1-202ENST00000369598 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
PHTF1-202ENST00000369598 LTV1Q96GA3 475 aaPredicted RBP18.91■□□□□ 0.62
PHTF1-202ENST00000369598 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
PHTF1-202ENST00000369598 GNAI1P63096 354 aa18.9■□□□□ 0.62
PHTF1-202ENST00000369598 ARHGEF10O15013 1369 aa18.9■□□□□ 0.62
PHTF1-202ENST00000369598 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
PHTF1-202ENST00000369598 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
PHTF1-202ENST00000369598 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
PHTF1-202ENST00000369598 JARID2Q92833 1246 aaPredicted RBP18.89■□□□□ 0.61
PHTF1-202ENST00000369598 TPRNQ4KMQ1 711 aa18.89■□□□□ 0.61
PHTF1-202ENST00000369598 NCOA3Q9Y6Q9 1424 aa18.89■□□□□ 0.61
PHTF1-202ENST00000369598 DCTN1Q14203 1278 aa18.88■□□□□ 0.61
PHTF1-202ENST00000369598 IFT57Q9NWB7 429 aa18.88■□□□□ 0.61
PHTF1-202ENST00000369598 LMTK3Q96Q04 1460 aa18.88■□□□□ 0.61
PHTF1-202ENST00000369598 STRCP1A6NGW2 1772 aa18.87■□□□□ 0.61
PHTF1-202ENST00000369598 MARF1Q9Y4F3 1742 aaKnown RBP18.87■□□□□ 0.61
PHTF1-202ENST00000369598 IP6K1Q92551 441 aa18.87■□□□□ 0.61
PHTF1-202ENST00000369598 SMC4Q9NTJ3 1288 aa18.87■□□□□ 0.61
PHTF1-202ENST00000369598 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
PHTF1-202ENST00000369598 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
PHTF1-202ENST00000369598 USP54Q70EL1 1684 aa18.87■□□□□ 0.61
PHTF1-202ENST00000369598 GCP02774 474 aa18.86■□□□□ 0.61
PHTF1-202ENST00000369598 CFAP44Q96MT7 982 aa18.86■□□□□ 0.61
PHTF1-202ENST00000369598 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
PHTF1-202ENST00000369598 MSH6P52701 1360 aa18.85■□□□□ 0.61
PHTF1-202ENST00000369598 TPM2P07951 284 aa18.85■□□□□ 0.61
PHTF1-202ENST00000369598 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
PHTF1-202ENST00000369598 RGPD1P0DJD0 1748 aa18.85■□□□□ 0.61
PHTF1-202ENST00000369598 DLG5Q8TDM6 1919 aa18.85■□□□□ 0.61
PHTF1-202ENST00000369598 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 MST1RQ04912 1400 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 TSC1Q92574 1164 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 DCCP43146 1447 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 DDX11L8A8MPP1 907 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 ANP32BQ92688 251 aaKnown RBP18.84■□□□□ 0.61
PHTF1-202ENST00000369598 MBIPQ9NS73 344 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 PRDM4Q9UKN5 801 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
PHTF1-202ENST00000369598 MTHFSDQ2M296 383 aaKnown RBP18.84■□□□□ 0.61
PHTF1-202ENST00000369598 KDRP35968 1356 aa18.83■□□□□ 0.61
PHTF1-202ENST00000369598 ZKSCAN2Q63HK3 967 aa18.83■□□□□ 0.61
PHTF1-202ENST00000369598 MCM10Q7L590 875 aa18.83■□□□□ 0.61
PHTF1-202ENST00000369598 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.61
PHTF1-202ENST00000369598 DDX17Q92841 729 aaKnown RBP18.83■□□□□ 0.6
PHTF1-202ENST00000369598 CHAMP1Q96JM3 812 aa18.83■□□□□ 0.6
PHTF1-202ENST00000369598 FOXD4L5Q5VV16 416 aaPredicted RBP18.82■□□□□ 0.6
PHTF1-202ENST00000369598 FOXD4L4Q8WXT5 416 aaPredicted RBP18.82■□□□□ 0.6
PHTF1-202ENST00000369598 RTF1Q92541 710 aaKnown RBP18.82■□□□□ 0.6
PHTF1-202ENST00000369598 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
PHTF1-202ENST00000369598 KIF1AQ12756 1690 aa18.82■□□□□ 0.6
PHTF1-202ENST00000369598 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
PHTF1-202ENST00000369598 SSFA2P28290 1259 aa18.82■□□□□ 0.6
PHTF1-202ENST00000369598 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
PHTF1-202ENST00000369598 UQCRHLA0A096LP55 91 aa18.81■□□□□ 0.6
PHTF1-202ENST00000369598 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
PHTF1-202ENST00000369598 UQCRHP07919 91 aa18.81■□□□□ 0.6
PHTF1-202ENST00000369598 STRCQ7RTU9 1775 aa18.81■□□□□ 0.6
PHTF1-202ENST00000369598 ZNF428Q96B54 188 aa18.81■□□□□ 0.6
PHTF1-202ENST00000369598 ALDH1L2Q3SY69 923 aa18.8■□□□□ 0.6
PHTF1-202ENST00000369598 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
PHTF1-202ENST00000369598 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
PHTF1-202ENST00000369598 NFAT5O94916 1531 aa18.8■□□□□ 0.6
PHTF1-202ENST00000369598 LTN1O94822 1766 aa18.8■□□□□ 0.6
PHTF1-202ENST00000369598 NPHP3Q7Z494 1330 aa18.79■□□□□ 0.6
PHTF1-202ENST00000369598 ZNF335Q9H4Z2 1342 aaPredicted RBP18.79■□□□□ 0.6
PHTF1-202ENST00000369598 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
PHTF1-202ENST00000369598 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
PHTF1-202ENST00000369598 VAMP4O75379 141 aa18.79■□□□□ 0.6
PHTF1-202ENST00000369598 ZSCAN30Q86W11 494 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms