RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 RIMS1Q86UR5 1692 aaKnown RBP13.9□□□□□ -0.18
CDC40-202ENST00000368930 FLT4P35916 1363 aa13.9□□□□□ -0.18
CDC40-202ENST00000368930 KDRP35968 1356 aa13.9□□□□□ -0.18
CDC40-202ENST00000368930 SOX12O15370 315 aa13.9□□□□□ -0.18
CDC40-202ENST00000368930 THEMISQ8N1K5 641 aaPredicted RBP13.9□□□□□ -0.18
CDC40-202ENST00000368930 PTPRCP08575 1304 aa13.9□□□□□ -0.18
CDC40-202ENST00000368930 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
CDC40-202ENST00000368930 SNX21Q969T3 373 aa13.89□□□□□ -0.19
CDC40-202ENST00000368930 PIK3C2AO00443 1686 aa13.89□□□□□ -0.19
CDC40-202ENST00000368930 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
CDC40-202ENST00000368930 XRN1Q8IZH2 1706 aaKnown RBP13.89□□□□□ -0.19
CDC40-202ENST00000368930 FER1L4A9Z1Z3 1794 aa13.88□□□□□ -0.19
CDC40-202ENST00000368930 ATP10DQ9P241 1426 aa13.88□□□□□ -0.19
CDC40-202ENST00000368930 FOXO3O43524 673 aa13.88□□□□□ -0.19
CDC40-202ENST00000368930 RPAP2Q8IXW5 612 aaPredicted RBP13.88□□□□□ -0.19
CDC40-202ENST00000368930 ANKRD44Q8N8A2 993 aa13.88□□□□□ -0.19
CDC40-202ENST00000368930 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
CDC40-202ENST00000368930 TBC1D9Q6ZT07 1266 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 EYA1Q99502 592 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 CHMP5Q9NZZ3 219 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 NCOA3Q9Y6Q9 1424 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 PLEKHM2Q8IWE5 1019 aa13.87□□□□□ -0.19
CDC40-202ENST00000368930 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 AMPHP49418 695 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
CDC40-202ENST00000368930 KIF2CQ99661 725 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 MIS18AQ9NYP9 233 aa13.86□□□□□ -0.19
CDC40-202ENST00000368930 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
CDC40-202ENST00000368930 CEP85Q6P2H3 762 aa13.85□□□□□ -0.19
CDC40-202ENST00000368930 RTL1A6NKG5 1358 aa13.85□□□□□ -0.19
CDC40-202ENST00000368930 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
CDC40-202ENST00000368930 DDIT3P35638 169 aa13.85□□□□□ -0.19
CDC40-202ENST00000368930 GAS2L2Q8NHY3 880 aa13.85□□□□□ -0.19
CDC40-202ENST00000368930 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
CDC40-202ENST00000368930 MSH6P52701 1360 aa13.85□□□□□ -0.19
CDC40-202ENST00000368930 CDC45O75419 566 aa13.84□□□□□ -0.19
CDC40-202ENST00000368930 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
CDC40-202ENST00000368930 TSPYL4Q9UJ04 414 aa13.84□□□□□ -0.19
CDC40-202ENST00000368930 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
CDC40-202ENST00000368930 MCM4P33991 863 aa13.83□□□□□ -0.19
CDC40-202ENST00000368930 NLRP6P59044 892 aa13.83□□□□□ -0.19
CDC40-202ENST00000368930 MEIS3Q99687 375 aa13.83□□□□□ -0.19
CDC40-202ENST00000368930 KCNA6P17658 529 aa13.83□□□□□ -0.2
CDC40-202ENST00000368930 TTC22Q5TAA0 569 aa13.83□□□□□ -0.2
CDC40-202ENST00000368930 BRPF3Q9ULD4 1205 aa13.83□□□□□ -0.2
CDC40-202ENST00000368930 LRRC37A3O60309 1634 aa13.82□□□□□ -0.2
CDC40-202ENST00000368930 G2E3Q7L622 706 aa13.82□□□□□ -0.2
CDC40-202ENST00000368930 C16orf71Q8IYS4 520 aaPredicted RBP13.82□□□□□ -0.2
CDC40-202ENST00000368930 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
CDC40-202ENST00000368930 HOXC9P31274 260 aa13.82□□□□□ -0.2
CDC40-202ENST00000368930 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
CDC40-202ENST00000368930 CCT4P50991 539 aaKnown RBP13.81□□□□□ -0.2
CDC40-202ENST00000368930 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
CDC40-202ENST00000368930 OTUD7AQ8TE49 926 aaPredicted RBP13.8□□□□□ -0.2
CDC40-202ENST00000368930 CACNA1FO60840 1977 aa13.79□□□□□ -0.2
CDC40-202ENST00000368930 F6X3S4 739 aa13.79□□□□□ -0.2
CDC40-202ENST00000368930 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
CDC40-202ENST00000368930 HMMRO75330 724 aa13.78□□□□□ -0.2
CDC40-202ENST00000368930 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
CDC40-202ENST00000368930 HSP90AB1P08238 724 aaKnown RBP13.78□□□□□ -0.2
CDC40-202ENST00000368930 NUTM2GQ5VZR2 741 aa13.78□□□□□ -0.2
CDC40-202ENST00000368930 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
CDC40-202ENST00000368930 STK31Q9BXU1 1019 aa13.78□□□□□ -0.2
CDC40-202ENST00000368930 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
CDC40-202ENST00000368930 SOS1Q07889 1333 aaPredicted RBP13.77□□□□□ -0.2
CDC40-202ENST00000368930 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.21
CDC40-202ENST00000368930 SMARCA5O60264 1052 aaPredicted RBP13.77□□□□□ -0.21
CDC40-202ENST00000368930 CCDC30Q5VVM6 783 aa13.77□□□□□ -0.21
CDC40-202ENST00000368930 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
CDC40-202ENST00000368930 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
CDC40-202ENST00000368930 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
CDC40-202ENST00000368930 FAM208AQ9UK61 1670 aaKnown RBP13.77□□□□□ -0.21
CDC40-202ENST00000368930 MAP3K5Q99683 1374 aa13.77□□□□□ -0.21
CDC40-202ENST00000368930 SDSP20132 328 aa13.76□□□□□ -0.21
CDC40-202ENST00000368930 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
CDC40-202ENST00000368930 USP26Q9BXU7 913 aa13.76□□□□□ -0.21
CDC40-202ENST00000368930 APBB1O00213 710 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 TRAK2O60296 914 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 GNAI2P04899 355 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 FLIIQ13045 1269 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 TAF7Q15545 349 aaPredicted RBP13.75□□□□□ -0.21
CDC40-202ENST00000368930 OSBPL3Q9H4L5 887 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 LTN1O94822 1766 aa13.75□□□□□ -0.21
CDC40-202ENST00000368930 DDX11L8A8MPP1 907 aa13.74□□□□□ -0.21
CDC40-202ENST00000368930 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
CDC40-202ENST00000368930 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
CDC40-202ENST00000368930 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
CDC40-202ENST00000368930 RABEP1Q15276 862 aa13.74□□□□□ -0.21
CDC40-202ENST00000368930 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
CDC40-202ENST00000368930 TNPO1Q92973 898 aaKnown RBP13.74□□□□□ -0.21
CDC40-202ENST00000368930 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
CDC40-202ENST00000368930 GNAI3P08754 354 aa13.73□□□□□ -0.21
CDC40-202ENST00000368930 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
CDC40-202ENST00000368930 FKBP5Q13451 457 aaPredicted RBP13.73□□□□□ -0.21
CDC40-202ENST00000368930 CASC1Q6TDU7 716 aa13.73□□□□□ -0.21
CDC40-202ENST00000368930 FSD2A1L4K1 749 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms