RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 GADD45BO75293 160 aaPredicted RBP21.64■■□□□ 1.06
CHTOP-201ENST00000368686 TMEM87AQ8NBN3 555 aa21.64■■□□□ 1.06
CHTOP-201ENST00000368686 KCNF1Q9H3M0 494 aa21.64■■□□□ 1.06
CHTOP-201ENST00000368686 DCTPP1Q9H773 170 aa21.64■■□□□ 1.06
CHTOP-201ENST00000368686 U2SURPO15042 1029 aaKnown RBP21.64■■□□□ 1.05
CHTOP-201ENST00000368686 KCNJ4P48050 445 aa21.64■■□□□ 1.05
CHTOP-201ENST00000368686 TAF7LQ5H9L4 462 aa21.64■■□□□ 1.05
CHTOP-201ENST00000368686 SETBP1Q9Y6X0 1596 aa21.64■■□□□ 1.05
CHTOP-201ENST00000368686 ERC2O15083 957 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 SDSP20132 328 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 MX1P20591 662 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 USP48Q86UV5 1035 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 MRPL50Q8N5N7 158 aaKnown RBP21.63■■□□□ 1.05
CHTOP-201ENST00000368686 DNAJC2Q99543 621 aaKnown RBP21.63■■□□□ 1.05
CHTOP-201ENST00000368686 IFT172Q9UG01 1749 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 TIGD1Q96MW7 591 aa21.63■■□□□ 1.05
CHTOP-201ENST00000368686 NEK4P51957 841 aa21.62■■□□□ 1.05
CHTOP-201ENST00000368686 SMTNL1A8MU46 457 aa21.62■■□□□ 1.05
CHTOP-201ENST00000368686 TERF2Q15554 542 aa21.62■■□□□ 1.05
CHTOP-201ENST00000368686 COL3A1P02461 1466 aaPredicted RBP21.62■■□□□ 1.05
CHTOP-201ENST00000368686 ADGRF5Q8IZF2 1346 aa21.61■■□□□ 1.05
CHTOP-201ENST00000368686 FBLN2P98095 1184 aa21.61■■□□□ 1.05
CHTOP-201ENST00000368686 WDR33Q9C0J8 1336 aaKnown RBP21.6■■□□□ 1.05
CHTOP-201ENST00000368686 KIF24Q5T7B8 1368 aa21.6■■□□□ 1.05
CHTOP-201ENST00000368686 NRXN1Q9ULB1 1477 aa21.6■■□□□ 1.05
CHTOP-201ENST00000368686 FAM193AP78312 1265 aa21.6■■□□□ 1.05
CHTOP-201ENST00000368686 KNDC1Q76NI1 1749 aa21.59■■□□□ 1.05
CHTOP-201ENST00000368686 VGFO15240 615 aaPredicted RBP21.59■■□□□ 1.05
CHTOP-201ENST00000368686 GDPD2Q9HCC8 539 aa21.59■■□□□ 1.05
CHTOP-201ENST00000368686 KRT222Q8N1A0 295 aa21.58■■□□□ 1.05
CHTOP-201ENST00000368686 CALCOCO1Q9P1Z2 691 aa21.58■■□□□ 1.05
CHTOP-201ENST00000368686 KIF1BO60333 1816 aa21.58■■□□□ 1.04
CHTOP-201ENST00000368686 DEPDC5O75140 1603 aa21.58■■□□□ 1.04
CHTOP-201ENST00000368686 KIF18AQ8NI77 898 aa21.58■■□□□ 1.04
CHTOP-201ENST00000368686 SMARCA5O60264 1052 aaPredicted RBP21.57■■□□□ 1.04
CHTOP-201ENST00000368686 CREBRFQ8IUR6 639 aa21.57■■□□□ 1.04
CHTOP-201ENST00000368686 C16orf71Q8IYS4 520 aaPredicted RBP21.57■■□□□ 1.04
CHTOP-201ENST00000368686 VAMP4O75379 141 aa21.57■■□□□ 1.04
CHTOP-201ENST00000368686 PLCB2Q00722 1185 aa21.57■■□□□ 1.04
CHTOP-201ENST00000368686 FUCA2Q9BTY2 467 aa21.56■■□□□ 1.04
CHTOP-201ENST00000368686 PAXBP1Q9Y5B6 917 aa21.56■■□□□ 1.04
CHTOP-201ENST00000368686 UBE2HP62256 183 aa21.55■■□□□ 1.04
CHTOP-201ENST00000368686 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
CHTOP-201ENST00000368686 API5Q9BZZ5 524 aaKnown RBP21.55■■□□□ 1.04
CHTOP-201ENST00000368686 TCHHQ07283 1943 aa21.55■■□□□ 1.04
CHTOP-201ENST00000368686 RTL1A6NKG5 1358 aa21.55■■□□□ 1.04
CHTOP-201ENST00000368686 ATAD2Q6PL18 1390 aa21.55■■□□□ 1.04
CHTOP-201ENST00000368686 RPAP1Q9BWH6 1393 aaPredicted RBP21.54■■□□□ 1.04
CHTOP-201ENST00000368686 MCCP23508 829 aa21.54■■□□□ 1.04
CHTOP-201ENST00000368686 TSPYL1Q9H0U9 437 aa21.54■■□□□ 1.04
CHTOP-201ENST00000368686 TULP2O00295 520 aa21.53■■□□□ 1.04
CHTOP-201ENST00000368686 RGS12O14924 1447 aa21.53■■□□□ 1.04
CHTOP-201ENST00000368686 AP5Z1O43299 807 aa21.53■■□□□ 1.04
CHTOP-201ENST00000368686 ANAPC15P60006 121 aa21.53■■□□□ 1.04
CHTOP-201ENST00000368686 SPC24Q8NBT2 197 aa21.53■■□□□ 1.04
CHTOP-201ENST00000368686 OTUD7AQ8TE49 926 aaPredicted RBP21.53■■□□□ 1.04
CHTOP-201ENST00000368686 FOXD4L6Q3SYB3 417 aaPredicted RBP21.52■■□□□ 1.04
CHTOP-201ENST00000368686 FOXD4L3Q6VB84 417 aaPredicted RBP21.52■■□□□ 1.04
CHTOP-201ENST00000368686 CCDC112Q8NEF3 446 aa21.52■■□□□ 1.04
CHTOP-201ENST00000368686 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
CHTOP-201ENST00000368686 PLCD3Q8N3E9 789 aa21.52■■□□□ 1.03
CHTOP-201ENST00000368686 ANKRD44Q8N8A2 993 aa21.52■■□□□ 1.03
CHTOP-201ENST00000368686 ZNF397Q8NF99 534 aaPredicted RBP21.51■■□□□ 1.03
CHTOP-201ENST00000368686 ABCC1P33527 1531 aa21.51■■□□□ 1.03
CHTOP-201ENST00000368686 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
CHTOP-201ENST00000368686 PLCH2O75038 1416 aa21.5■■□□□ 1.03
CHTOP-201ENST00000368686 TRAK1Q9UPV9 953 aa21.5■■□□□ 1.03
CHTOP-201ENST00000368686 TNNT1P13805 278 aa21.49■■□□□ 1.03
CHTOP-201ENST00000368686 RPAP2Q8IXW5 612 aaPredicted RBP21.49■■□□□ 1.03
CHTOP-201ENST00000368686 FAM53CQ9NYF3 392 aa21.49■■□□□ 1.03
CHTOP-201ENST00000368686 PTGS1P23219 599 aa21.49■■□□□ 1.03
CHTOP-201ENST00000368686 C16orf45Q96MC5 204 aaPredicted RBP21.49■■□□□ 1.03
CHTOP-201ENST00000368686 ATP10DQ9P241 1426 aa21.49■■□□□ 1.03
CHTOP-201ENST00000368686 VWDEQ8N2E2 1590 aa21.49■■□□□ 1.03
CHTOP-201ENST00000368686 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
CHTOP-201ENST00000368686 MROH2AA6NES4 1674 aa21.48■■□□□ 1.03
CHTOP-201ENST00000368686 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
CHTOP-201ENST00000368686 IL17RAQ96F46 866 aa21.47■■□□□ 1.03
CHTOP-201ENST00000368686 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
CHTOP-201ENST00000368686 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
CHTOP-201ENST00000368686 GIMAP6Q6P9H5 292 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 UGGT1Q9NYU2 1555 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 CCDC192P0DO97 292 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 TSPYL6Q8N831 410 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 OSBPL3Q9H4L5 887 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 LRRC7Q96NW7 1537 aa21.46■■□□□ 1.03
CHTOP-201ENST00000368686 FCHSD2O94868 740 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
CHTOP-201ENST00000368686 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 EVC2Q86UK5 1308 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 SSH2Q76I76 1423 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 GNAI1P63096 354 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.45■■□□□ 1.02
CHTOP-201ENST00000368686 ADGRB1O14514 1584 aa21.45■■□□□ 1.02
CHTOP-201ENST00000368686 ZSCAN22P10073 491 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-201ENST00000368686 CAPN2P17655 700 aa21.44■■□□□ 1.02
CHTOP-201ENST00000368686 NAA30Q147X3 362 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms