RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ARHGAP45Q92619 1136 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 SETD1AO15047 1707 aaKnown RBP17.29■□□□□ 0.36
SHC1-202ENST00000368445 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
SHC1-202ENST00000368445 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
SHC1-202ENST00000368445 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
SHC1-202ENST00000368445 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
SHC1-202ENST00000368445 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
SHC1-202ENST00000368445 GCP02774 474 aa17.27■□□□□ 0.36
SHC1-202ENST00000368445 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.36
SHC1-202ENST00000368445 C1orf141Q5JVX7 400 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 SMC5Q8IY18 1101 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 MEIS3Q99687 375 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
SHC1-202ENST00000368445 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
SHC1-202ENST00000368445 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
SHC1-202ENST00000368445 TAF7Q15545 349 aaPredicted RBP17.25■□□□□ 0.35
SHC1-202ENST00000368445 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
SHC1-202ENST00000368445 USP31Q70CQ4 1352 aa17.25■□□□□ 0.35
SHC1-202ENST00000368445 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
SHC1-202ENST00000368445 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
SHC1-202ENST00000368445 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 SLIT1O75093 1534 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 IP6K1Q92551 441 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 IGSF1Q8N6C5 1336 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
SHC1-202ENST00000368445 SMARCA5O60264 1052 aaPredicted RBP17.23■□□□□ 0.35
SHC1-202ENST00000368445 ANXA1P04083 346 aa17.23■□□□□ 0.35
SHC1-202ENST00000368445 NUCB1Q02818 461 aa17.23■□□□□ 0.35
SHC1-202ENST00000368445 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
SHC1-202ENST00000368445 HSP90AA1P07900 732 aaKnown RBP17.22■□□□□ 0.35
SHC1-202ENST00000368445 ARHGEF10O15013 1369 aa17.22■□□□□ 0.35
SHC1-202ENST00000368445 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
SHC1-202ENST00000368445 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
SHC1-202ENST00000368445 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
SHC1-202ENST00000368445 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
SHC1-202ENST00000368445 CEP170BQ9Y4F5 1589 aaPredicted RBP17.21■□□□□ 0.35
SHC1-202ENST00000368445 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
SHC1-202ENST00000368445 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
SHC1-202ENST00000368445 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
SHC1-202ENST00000368445 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.34
SHC1-202ENST00000368445 ABCC4O15439 1325 aa17.2■□□□□ 0.34
SHC1-202ENST00000368445 FLIIQ13045 1269 aa17.2■□□□□ 0.34
SHC1-202ENST00000368445 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
SHC1-202ENST00000368445 HMMRO75330 724 aa17.19■□□□□ 0.34
SHC1-202ENST00000368445 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
SHC1-202ENST00000368445 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
SHC1-202ENST00000368445 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
SHC1-202ENST00000368445 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
SHC1-202ENST00000368445 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
SHC1-202ENST00000368445 PTPRCP08575 1304 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 KCNQ3O43525 872 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
SHC1-202ENST00000368445 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
SHC1-202ENST00000368445 ANKARQ7Z5J8 1434 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 AIMP1Q12904 312 aaKnown RBP17.17■□□□□ 0.34
SHC1-202ENST00000368445 NFKBIBQ15653 356 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 INTS3Q68E01 1043 aaKnown RBP17.17■□□□□ 0.34
SHC1-202ENST00000368445 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
SHC1-202ENST00000368445 MSH6P52701 1360 aa17.16■□□□□ 0.34
SHC1-202ENST00000368445 CCT4P50991 539 aaKnown RBP17.16■□□□□ 0.34
SHC1-202ENST00000368445 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
SHC1-202ENST00000368445 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
SHC1-202ENST00000368445 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
SHC1-202ENST00000368445 GNAI2P04899 355 aa17.15■□□□□ 0.34
SHC1-202ENST00000368445 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
SHC1-202ENST00000368445 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
SHC1-202ENST00000368445 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
SHC1-202ENST00000368445 USP19O94966 1318 aa17.15■□□□□ 0.34
SHC1-202ENST00000368445 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
SHC1-202ENST00000368445 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
SHC1-202ENST00000368445 HTATSF1O43719 755 aaKnown RBP17.14■□□□□ 0.33
SHC1-202ENST00000368445 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
SHC1-202ENST00000368445 OS9Q13438 667 aaPredicted RBP17.13■□□□□ 0.33
SHC1-202ENST00000368445 TSHZ3Q63HK5 1081 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 ANKRD44Q8N8A2 993 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 ARXQ96QS3 562 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
SHC1-202ENST00000368445 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
SHC1-202ENST00000368445 CRB1P82279 1406 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 ADGRL3Q9HAR2 1447 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
SHC1-202ENST00000368445 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 TRIM6-TRIM34B2RNG4 842 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
SHC1-202ENST00000368445 SLC39A6Q13433 755 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
SHC1-202ENST00000368445 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
SHC1-202ENST00000368445 GNAI3P08754 354 aa17.11■□□□□ 0.33
SHC1-202ENST00000368445 USP35Q9P2H5 1018 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms