RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 FAM196AQ6ZSG2 479 aa25.12■■□□□ 1.61
LMNA-204ENST00000368298 MARCH10Q8NA82 808 aaPredicted RBP25.12■■□□□ 1.61
LMNA-204ENST00000368298 ZCRB1Q8TBF4 217 aaKnown RBP25.11■■□□□ 1.61
LMNA-204ENST00000368298 SHANK3Q9BYB0 1731 aa25.1■■□□□ 1.61
LMNA-204ENST00000368298 FAM182BQ5T319 152 aa25.1■■□□□ 1.61
LMNA-204ENST00000368298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
LMNA-204ENST00000368298 PKD1L3Q7Z443 1732 aa25.1■■□□□ 1.61
LMNA-204ENST00000368298 EP400Q96L91 3159 aa25.09■■□□□ 1.61
LMNA-204ENST00000368298 SULT6B1Q6IMI4 303 aa25.08■■□□□ 1.6
LMNA-204ENST00000368298 CCDC125Q86Z20 511 aa25.08■■□□□ 1.6
LMNA-204ENST00000368298 AEBP1Q8IUX7 1158 aa25.07■■□□□ 1.6
LMNA-204ENST00000368298 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
LMNA-204ENST00000368298 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
LMNA-204ENST00000368298 PCDH11XQ9BZA7 1347 aa25.04■■□□□ 1.6
LMNA-204ENST00000368298 PCDH11YQ9BZA8 1340 aa25.04■■□□□ 1.6
LMNA-204ENST00000368298 SBF2Q86WG5 1849 aa25.03■■□□□ 1.6
LMNA-204ENST00000368298 DDX54Q8TDD1 881 aaKnown RBP25.02■■□□□ 1.6
LMNA-204ENST00000368298 U2SURPO15042 1029 aaKnown RBP25.02■■□□□ 1.6
LMNA-204ENST00000368298 HMOX1P09601 288 aa25.01■■□□□ 1.59
LMNA-204ENST00000368298 AMOTQ4VCS5 1084 aa25.01■■□□□ 1.59
LMNA-204ENST00000368298 CYP27B1O15528 508 aa25■■□□□ 1.59
LMNA-204ENST00000368298 ANP32CO43423 234 aa24.99■■□□□ 1.59
LMNA-204ENST00000368298 PLEKHO1Q53GL0 409 aaPredicted RBP24.99■■□□□ 1.59
LMNA-204ENST00000368298 NKX1-1Q15270 411 aaPredicted RBP24.98■■□□□ 1.59
LMNA-204ENST00000368298 TRIM37O94972 964 aa24.97■■□□□ 1.59
LMNA-204ENST00000368298 TNS1Q9HBL0 1735 aaKnown RBP24.97■■□□□ 1.59
LMNA-204ENST00000368298 FCHSD2O94868 740 aa24.96■■□□□ 1.59
LMNA-204ENST00000368298 U2AF1L5P0DN76 240 aaPredicted RBP24.96■■□□□ 1.59
LMNA-204ENST00000368298 U2AF1Q01081 240 aaKnown RBP eCLIP24.96■■□□□ 1.59
LMNA-204ENST00000368298 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
LMNA-204ENST00000368298 IFNL2Q8IZJ0 200 aa24.96■■□□□ 1.59
LMNA-204ENST00000368298 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
LMNA-204ENST00000368298 PHKG2P15735 406 aa24.95■■□□□ 1.58
LMNA-204ENST00000368298 NHSQ6T4R5 1651 aa24.94■■□□□ 1.58
LMNA-204ENST00000368298 SF3B2Q13435 895 aaKnown RBP24.93■■□□□ 1.58
LMNA-204ENST00000368298 DOT1LQ8TEK3 1739 aa24.9■■□□□ 1.58
LMNA-204ENST00000368298 KCNQ2O43526 872 aa24.9■■□□□ 1.58
LMNA-204ENST00000368298 PRKAR2BP31323 418 aa24.9■■□□□ 1.58
LMNA-204ENST00000368298 ZNF530Q6P9A1 599 aaPredicted RBP24.9■■□□□ 1.58
LMNA-204ENST00000368298 PTF1AQ7RTS3 328 aa24.89■■□□□ 1.58
LMNA-204ENST00000368298 HSP90AB1P08238 724 aaKnown RBP24.89■■□□□ 1.57
LMNA-204ENST00000368298 MTHFSDQ2M296 383 aaKnown RBP24.89■■□□□ 1.57
LMNA-204ENST00000368298 ACSBG1Q96GR2 724 aa24.89■■□□□ 1.57
LMNA-204ENST00000368298 APBA3O96018 575 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 BAG6P46379 1132 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 PRIM1P49642 420 aaKnown RBP24.87■■□□□ 1.57
LMNA-204ENST00000368298 AKAP4Q5JQC9 854 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 C1orf141Q5JVX7 400 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 DCAF5Q96JK2 942 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 PHACTR3Q96KR7 559 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 TOGARAM1Q9Y4F4 1720 aa24.87■■□□□ 1.57
LMNA-204ENST00000368298 PLSCR1O15162 318 aa24.86■■□□□ 1.57
LMNA-204ENST00000368298 PLEKHF1Q96S99 279 aa24.86■■□□□ 1.57
LMNA-204ENST00000368298 PNNQ9H307 717 aaKnown RBP24.86■■□□□ 1.57
LMNA-204ENST00000368298 KAT6BQ8WYB5 2073 aa24.86■■□□□ 1.57
LMNA-204ENST00000368298 MIER1Q8N108 512 aa24.85■■□□□ 1.57
LMNA-204ENST00000368298 GAS2L2Q8NHY3 880 aa24.85■■□□□ 1.57
LMNA-204ENST00000368298 RGPD3A6NKT7 1758 aaPredicted RBP24.85■■□□□ 1.57
LMNA-204ENST00000368298 RGPD4Q7Z3J3 1758 aa24.85■■□□□ 1.57
LMNA-204ENST00000368298 BTAF1O14981 1849 aa24.84■■□□□ 1.57
LMNA-204ENST00000368298 DEFB132Q7Z7B7 95 aa24.84■■□□□ 1.57
LMNA-204ENST00000368298 ITGB4P16144 1822 aa24.84■■□□□ 1.57
LMNA-204ENST00000368298 KDM6AO15550 1401 aaPredicted RBP24.83■■□□□ 1.57
LMNA-204ENST00000368298 CCDC184Q52MB2 194 aa24.83■■□□□ 1.57
LMNA-204ENST00000368298 CAMKK2Q96RR4 588 aa24.83■■□□□ 1.57
LMNA-204ENST00000368298 ERVV-2B6SEH9 535 aa24.83■■□□□ 1.56
LMNA-204ENST00000368298 ADAMTS7Q9UKP4 1686 aa24.83■■□□□ 1.56
LMNA-204ENST00000368298 WDR43Q15061 677 aaKnown RBP eCLIP24.82■■□□□ 1.56
LMNA-204ENST00000368298 SCN11AQ9UI33 1791 aa24.81■■□□□ 1.56
LMNA-204ENST00000368298 EN1Q05925 392 aaPredicted RBP24.81■■□□□ 1.56
LMNA-204ENST00000368298 ADAMTS8Q9UP79 889 aa24.81■■□□□ 1.56
LMNA-204ENST00000368298 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
LMNA-204ENST00000368298 MPRIPQ6WCQ1 1025 aa24.79■■□□□ 1.56
LMNA-204ENST00000368298 MAP3K5Q99683 1374 aa24.78■■□□□ 1.56
LMNA-204ENST00000368298 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
LMNA-204ENST00000368298 NEFMP07197 916 aa24.78■■□□□ 1.56
LMNA-204ENST00000368298 PIGBQ92521 554 aa24.77■■□□□ 1.56
LMNA-204ENST00000368298 MRS2Q9HD23 443 aa24.77■■□□□ 1.56
LMNA-204ENST00000368298 VIRMAQ69YN4 1812 aaKnown RBP24.77■■□□□ 1.56
LMNA-204ENST00000368298 RNMTO43148 476 aaKnown RBP24.77■■□□□ 1.56
LMNA-204ENST00000368298 EZH2Q15910 746 aaKnown RBP24.77■■□□□ 1.56
LMNA-204ENST00000368298 PNISRQ8TF01 805 aaKnown RBP24.77■■□□□ 1.56
LMNA-204ENST00000368298 RREB1Q92766 1687 aa24.76■■□□□ 1.55
LMNA-204ENST00000368298 LGR6Q9HBX8 967 aa24.76■■□□□ 1.55
LMNA-204ENST00000368298 TMOD3Q9NYL9 352 aa24.76■■□□□ 1.55
LMNA-204ENST00000368298 HTATSF1O43719 755 aaKnown RBP24.75■■□□□ 1.55
LMNA-204ENST00000368298 MRC1P22897 1456 aa24.75■■□□□ 1.55
LMNA-204ENST00000368298 PROM2Q8N271 834 aa24.74■■□□□ 1.55
LMNA-204ENST00000368298 MAPK8IP3Q9UPT6 1336 aa24.74■■□□□ 1.55
LMNA-204ENST00000368298 CABP4P57796 275 aa24.73■■□□□ 1.55
LMNA-204ENST00000368298 IL17REQ8NFR9 667 aa24.73■■□□□ 1.55
LMNA-204ENST00000368298 RUNDC1Q96C34 613 aa24.73■■□□□ 1.55
LMNA-204ENST00000368298 CEMIPQ8WUJ3 1361 aa24.73■■□□□ 1.55
LMNA-204ENST00000368298 LY75O60449 1722 aa24.73■■□□□ 1.55
LMNA-204ENST00000368298 NFE2L2Q16236 605 aa24.72■■□□□ 1.55
LMNA-204ENST00000368298 SLC52A2Q9HAB3 445 aa24.72■■□□□ 1.55
LMNA-204ENST00000368298 TXNRD1Q16881 649 aa24.71■■□□□ 1.55
LMNA-204ENST00000368298 NFATC2IPQ8NCF5 419 aa24.71■■□□□ 1.55
LMNA-204ENST00000368298 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
LMNA-204ENST00000368298 SMARCC1Q92922 1105 aaPredicted RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms