RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 REPIN1Q9BWE0 567 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-205ENST00000368295 SLAIN2Q9P270 581 aa5.26□□□□□ -1.57
ECHDC1-205ENST00000368295 SSTR3P32745 418 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 SWT1Q5T5J6 900 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 RSPH4AQ5TD94 716 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 TRIM67Q6ZTA4 783 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 KDM5CP41229 1560 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 MAP3K1Q13233 1512 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 FGD6Q6ZV73 1430 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 SLF2Q8IX21 1173 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 ITSN2Q9NZM3 1697 aa5.25□□□□□ -1.57
ECHDC1-205ENST00000368295 MROH2AA6NES4 1674 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 MS4A1P11836 297 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 NECTIN2Q92692 538 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 PPP1R1BQ9UD71 204 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 DDX11L8A8MPP1 907 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 BRD2P25440 801 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 SF3B2Q13435 895 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 SAMD7Q7Z3H4 446 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 RDH13Q8NBN7 331 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 AAASQ9NRG9 546 aa5.24□□□□□ -1.57
ECHDC1-205ENST00000368295 SHPRHQ149N8 1683 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 FAM187AA6NFU0 413 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 CD46P15529 392 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 FAM117AQ9C073 453 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 USP21Q9UK80 565 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 REREQ9P2R6 1566 aa5.23□□□□□ -1.57
ECHDC1-205ENST00000368295 HSPA6P17066 643 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 GGT6Q6P531 493 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 PROSER2Q86WR7 435 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 UBE2Q2Q8WVN8 375 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 BEGAINQ9BUH8 593 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 TNRQ92752 1358 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 RNF40O75150 1001 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 PPP4CP60510 307 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 DIXDC1Q155Q3 683 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 IL27Q8NEV9 243 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 MTRQ99707 1265 aa5.22□□□□□ -1.57
ECHDC1-205ENST00000368295 DEPDC5O75140 1603 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 ZNF518AQ6AHZ1 1483 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 LRRC9Q6ZRR7 1453 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 DIP2AQ14689 1571 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 PLEKHG3A1L390 1219 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 ARID3AQ99856 593 aa5.21□□□□□ -1.58
ECHDC1-205ENST00000368295 KIF27Q86VH2 1401 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 ZC3H13Q5T200 1668 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 KMT5BQ4FZB7 885 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 NUTM1Q86Y26 1132 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 THEMISQ8N1K5 641 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 CRIPAKQ8N1N5 446 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 DDX17Q92841 729 aaKnown RBP5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 TRPC5Q9UL62 973 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 KDM5DQ9BY66 1539 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 ATRNO75882 1429 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 C11orf95C9JLR9 678 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 LTKP29376 864 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 SH3D19Q5HYK7 790 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 PRR14Q9BWN1 585 aa5.2□□□□□ -1.58
ECHDC1-205ENST00000368295 TNS2Q63HR2 1409 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 PLEKHD1A6NEE1 506 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 ST8SIA5O15466 376 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 CFHP08603 1231 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 SLC10A3P09131 477 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 SLC19A1P41440 591 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 USP46P62068 366 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 ZNF598Q86UK7 904 aaKnown RBP5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 WWC3Q9ULE0 1092 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 NINLQ9Y2I6 1382 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 UGGT1Q9NYU2 1555 aa5.19□□□□□ -1.58
ECHDC1-205ENST00000368295 NUP153P49790 1475 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 GCGRP47871 477 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 TBC1D2Q9BYX2 928 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 FAM135AQ9P2D6 1515 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 MSH6P52701 1360 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 TERTO14746 1132 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 BAG6P46379 1132 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 EZH2Q15910 746 aaKnown RBP5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 EFCAB2Q5VUJ9 269 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 ZSCAN1Q8NBB4 408 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 SPIRE2Q8WWL2 714 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 PCMTD1Q96MG8 357 aaPredicted RBP5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 GOPCQ9HD26 462 aa5.18□□□□□ -1.58
ECHDC1-205ENST00000368295 AHDC1Q5TGY3 1603 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 KDM4AO75164 1064 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 KCTD17Q8N5Z5 321 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 DNAJC5GQ8N7S2 189 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 ATP7AQ04656 1500 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 TIAM1Q13009 1591 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 MAST1Q9Y2H9 1570 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 MLH3Q9UHC1 1453 aa5.17□□□□□ -1.58
ECHDC1-205ENST00000368295 GRIPAP1Q4V328 841 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 FAM182BQ5T319 152 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 GOLGA3Q08378 1498 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 RAD21O60216 631 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 CLK2P49760 499 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 HTRA3P83110 453 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 SKIV2LQ15477 1246 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 MYSM1Q5VVJ2 828 aa5.16□□□□□ -1.58
ECHDC1-205ENST00000368295 SPRYD7Q5W111 196 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms