RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
CCT3-206ENST00000368262 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
CCT3-206ENST00000368262 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
CCT3-206ENST00000368262 REC8O95072 547 aa17.22■□□□□ 0.35
CCT3-206ENST00000368262 SDSP20132 328 aa17.22■□□□□ 0.35
CCT3-206ENST00000368262 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
CCT3-206ENST00000368262 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
CCT3-206ENST00000368262 DLC1Q96QB1 1528 aa17.21■□□□□ 0.35
CCT3-206ENST00000368262 THUMPD2Q9BTF0 503 aaKnown RBP17.21■□□□□ 0.35
CCT3-206ENST00000368262 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.34
CCT3-206ENST00000368262 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
CCT3-206ENST00000368262 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
CCT3-206ENST00000368262 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
CCT3-206ENST00000368262 NRKQ7Z2Y5 1582 aa17.2■□□□□ 0.34
CCT3-206ENST00000368262 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
CCT3-206ENST00000368262 SYCE3A1L190 88 aa17.19■□□□□ 0.34
CCT3-206ENST00000368262 IL13P35225 146 aa17.19■□□□□ 0.34
CCT3-206ENST00000368262 C16orf71Q8IYS4 520 aaPredicted RBP17.19■□□□□ 0.34
CCT3-206ENST00000368262 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
CCT3-206ENST00000368262 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
CCT3-206ENST00000368262 ERC2O15083 957 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 BRD1O95696 1058 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 MCM2P49736 904 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 CUL4AQ13619 759 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 GGT6Q6P531 493 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
CCT3-206ENST00000368262 DIP2CQ9Y2E4 1556 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
CCT3-206ENST00000368262 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
CCT3-206ENST00000368262 IL17RAQ96F46 866 aa17.18■□□□□ 0.34
CCT3-206ENST00000368262 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
CCT3-206ENST00000368262 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
CCT3-206ENST00000368262 TSPY26PQ9H489 355 aa17.16■□□□□ 0.34
CCT3-206ENST00000368262 STK26Q9P289 416 aa17.16■□□□□ 0.34
CCT3-206ENST00000368262 INTS4Q96HW7 963 aaKnown RBP17.15■□□□□ 0.34
CCT3-206ENST00000368262 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
CCT3-206ENST00000368262 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
CCT3-206ENST00000368262 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
CCT3-206ENST00000368262 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.34
CCT3-206ENST00000368262 HMOX1P09601 288 aa17.14■□□□□ 0.34
CCT3-206ENST00000368262 IDI1Q13907 227 aa17.14■□□□□ 0.34
CCT3-206ENST00000368262 EDC4Q6P2E9 1401 aaKnown RBP17.14■□□□□ 0.33
CCT3-206ENST00000368262 KIAA0232Q92628 1395 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
CCT3-206ENST00000368262 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 UVSSAQ2YD98 709 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 SYAP1Q96A49 352 aaPredicted RBP17.14■□□□□ 0.33
CCT3-206ENST00000368262 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 MSH6P52701 1360 aa17.14■□□□□ 0.33
CCT3-206ENST00000368262 MYRIPQ8NFW9 859 aa17.13■□□□□ 0.33
CCT3-206ENST00000368262 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
CCT3-206ENST00000368262 PTPRCP08575 1304 aa17.13■□□□□ 0.33
CCT3-206ENST00000368262 ANAPC15P60006 121 aa17.12■□□□□ 0.33
CCT3-206ENST00000368262 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
CCT3-206ENST00000368262 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCT3-206ENST00000368262 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
CCT3-206ENST00000368262 N4BP2Q86UW6 1770 aaPredicted RBP17.11■□□□□ 0.33
CCT3-206ENST00000368262 FAM184AQ8NB25 1140 aa17.11■□□□□ 0.33
CCT3-206ENST00000368262 PRIMPOLQ96LW4 560 aa17.11■□□□□ 0.33
CCT3-206ENST00000368262 PHF14O94880 888 aa17.11■□□□□ 0.33
CCT3-206ENST00000368262 GTF2F1P35269 517 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCT3-206ENST00000368262 CHAMP1Q96JM3 812 aa17.11■□□□□ 0.33
CCT3-206ENST00000368262 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
CCT3-206ENST00000368262 C3P01024 1663 aa17.11■□□□□ 0.33
CCT3-206ENST00000368262 SALL3Q9BXA9 1300 aa17.1■□□□□ 0.33
CCT3-206ENST00000368262 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
CCT3-206ENST00000368262 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 EMILIN1Q9Y6C2 1016 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 TCHHQ07283 1943 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 NEK4P51957 841 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 PDE1AP54750 535 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 PIBF1Q8WXW3 757 aa17.09■□□□□ 0.33
CCT3-206ENST00000368262 HMMRO75330 724 aa17.08■□□□□ 0.33
CCT3-206ENST00000368262 HMGN5P82970 282 aaKnown RBP17.08■□□□□ 0.33
CCT3-206ENST00000368262 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.33
CCT3-206ENST00000368262 RNF214Q8ND24 703 aa17.08■□□□□ 0.33
CCT3-206ENST00000368262 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.33
CCT3-206ENST00000368262 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
CCT3-206ENST00000368262 FBLN1P23142 703 aa17.08■□□□□ 0.32
CCT3-206ENST00000368262 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
CCT3-206ENST00000368262 NEO1Q92859 1461 aa17.07■□□□□ 0.32
CCT3-206ENST00000368262 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
CCT3-206ENST00000368262 CHL1O00533 1208 aa17.07■□□□□ 0.32
CCT3-206ENST00000368262 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
CCT3-206ENST00000368262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■□□□ 12.4
CCT3-206ENST00000368262 RICTORQ6R327 1708 aa17.07■□□□□ 0.32
CCT3-206ENST00000368262 MCCP23508 829 aa17.06■□□□□ 0.32
CCT3-206ENST00000368262 MEIS3Q99687 375 aa17.06■□□□□ 0.32
CCT3-206ENST00000368262 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
CCT3-206ENST00000368262 FAM83GA6ND36 823 aa17.06■□□□□ 0.32
CCT3-206ENST00000368262 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
CCT3-206ENST00000368262 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms