RNA–Protein interactions for RNA: ENST00000368102.5

SNHG28-201, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNHG28, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-201ENST00000368102 NLRP6P59044 892 aa17.61■□□□□ 0.41
SNHG28-201ENST00000368102 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
SNHG28-201ENST00000368102 FLT4P35916 1363 aa17.61■□□□□ 0.41
SNHG28-201ENST00000368102 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
SNHG28-201ENST00000368102 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
SNHG28-201ENST00000368102 ANKARQ7Z5J8 1434 aa17.6■□□□□ 0.41
SNHG28-201ENST00000368102 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
SNHG28-201ENST00000368102 AMPHP49418 695 aa17.6■□□□□ 0.41
SNHG28-201ENST00000368102 CHD1LQ86WJ1 897 aa17.6■□□□□ 0.41
SNHG28-201ENST00000368102 CHL1O00533 1208 aa17.59■□□□□ 0.41
SNHG28-201ENST00000368102 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
SNHG28-201ENST00000368102 NUTM2GQ5VZR2 741 aa17.58■□□□□ 0.41
SNHG28-201ENST00000368102 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.41
SNHG28-201ENST00000368102 ABCC4O15439 1325 aa17.58■□□□□ 0.4
SNHG28-201ENST00000368102 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
SNHG28-201ENST00000368102 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
SNHG28-201ENST00000368102 EYA1Q99502 592 aa17.57■□□□□ 0.4
SNHG28-201ENST00000368102 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
SNHG28-201ENST00000368102 CHMP4BQ9H444 224 aaKnown RBP17.57■□□□□ 0.4
SNHG28-201ENST00000368102 FOXO3O43524 673 aa17.56■□□□□ 0.4
SNHG28-201ENST00000368102 MTHFSDQ2M296 383 aaKnown RBP17.56■□□□□ 0.4
SNHG28-201ENST00000368102 RRAGDQ9NQL2 400 aaPredicted RBP17.56■□□□□ 0.4
SNHG28-201ENST00000368102 PIK3C2AO00443 1686 aa17.56■□□□□ 0.4
SNHG28-201ENST00000368102 FSD2A1L4K1 749 aa17.55■□□□□ 0.4
SNHG28-201ENST00000368102 ABTB2Q8N961 1025 aa17.55■□□□□ 0.4
SNHG28-201ENST00000368102 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
SNHG28-201ENST00000368102 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
SNHG28-201ENST00000368102 KDRP35968 1356 aa17.54■□□□□ 0.4
SNHG28-201ENST00000368102 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
SNHG28-201ENST00000368102 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
SNHG28-201ENST00000368102 CRB1P82279 1406 aa17.53■□□□□ 0.4
SNHG28-201ENST00000368102 HAP1P54257 671 aaPredicted RBP17.53■□□□□ 0.4
SNHG28-201ENST00000368102 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
SNHG28-201ENST00000368102 HOXC9P31274 260 aa17.53■□□□□ 0.4
SNHG28-201ENST00000368102 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
SNHG28-201ENST00000368102 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
SNHG28-201ENST00000368102 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
SNHG28-201ENST00000368102 MCM4P33991 863 aa17.52■□□□□ 0.4
SNHG28-201ENST00000368102 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
SNHG28-201ENST00000368102 PHF8Q9UPP1 1060 aa17.52■□□□□ 0.4
SNHG28-201ENST00000368102 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
SNHG28-201ENST00000368102 APBB1O00213 710 aa17.51■□□□□ 0.39
SNHG28-201ENST00000368102 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNHG28-201ENST00000368102 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
SNHG28-201ENST00000368102 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 CHMP5Q9NZZ3 219 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 GCC1Q96CN9 775 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 KIF2CQ99661 725 aa17.5■□□□□ 0.39
SNHG28-201ENST00000368102 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
SNHG28-201ENST00000368102 OTUD7AQ8TE49 926 aaPredicted RBP17.49■□□□□ 0.39
SNHG28-201ENST00000368102 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
SNHG28-201ENST00000368102 INTS3Q68E01 1043 aaKnown RBP17.48■□□□□ 0.39
SNHG28-201ENST00000368102 LTV1Q96GA3 475 aaPredicted RBP17.48■□□□□ 0.39
SNHG28-201ENST00000368102 GSPT1P15170 499 aaKnown RBP17.48■□□□□ 0.39
SNHG28-201ENST00000368102 CLCN1P35523 988 aa17.48■□□□□ 0.39
SNHG28-201ENST00000368102 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
SNHG28-201ENST00000368102 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
SNHG28-201ENST00000368102 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
SNHG28-201ENST00000368102 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
SNHG28-201ENST00000368102 RGS12O14924 1447 aa17.46■□□□□ 0.39
SNHG28-201ENST00000368102 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
SNHG28-201ENST00000368102 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
SNHG28-201ENST00000368102 ESCO1Q5FWF5 840 aa17.46■□□□□ 0.39
SNHG28-201ENST00000368102 SMARCA5O60264 1052 aaPredicted RBP17.46■□□□□ 0.38
SNHG28-201ENST00000368102 MRE11P49959 708 aa17.45■□□□□ 0.38
SNHG28-201ENST00000368102 PANK2Q9BZ23 570 aa17.45■□□□□ 0.38
SNHG28-201ENST00000368102 PTPRCP08575 1304 aa17.45■□□□□ 0.38
SNHG28-201ENST00000368102 MARF1Q9Y4F3 1742 aaKnown RBP17.45■□□□□ 0.38
SNHG28-201ENST00000368102 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
SNHG28-201ENST00000368102 ZNF142P52746 1687 aaPredicted RBP17.44■□□□□ 0.38
SNHG28-201ENST00000368102 GNAT3A8MTJ3 354 aa17.44■□□□□ 0.38
SNHG28-201ENST00000368102 PSME1Q06323 249 aa17.44■□□□□ 0.38
SNHG28-201ENST00000368102 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
SNHG28-201ENST00000368102 TRAK2O60296 914 aa17.44■□□□□ 0.38
SNHG28-201ENST00000368102 ADGRL3Q9HAR2 1447 aa17.43■□□□□ 0.38
SNHG28-201ENST00000368102 MSH6P52701 1360 aa17.43■□□□□ 0.38
SNHG28-201ENST00000368102 NWD1Q149M9 1564 aa17.43■□□□□ 0.38
SNHG28-201ENST00000368102 USHBP1Q8N6Y0 703 aa17.43■□□□□ 0.38
SNHG28-201ENST00000368102 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
SNHG28-201ENST00000368102 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
SNHG28-201ENST00000368102 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
SNHG28-201ENST00000368102 MEIS3Q99687 375 aa17.42■□□□□ 0.38
SNHG28-201ENST00000368102 G2E3Q7L622 706 aa17.42■□□□□ 0.38
SNHG28-201ENST00000368102 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 NPHP4O75161 1426 aaPredicted RBP17.41■□□□□ 0.38
SNHG28-201ENST00000368102 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 F6X3S4 739 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 DDIT3P35638 169 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 IL17REQ8NFR9 667 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 IP6K1Q92551 441 aa17.41■□□□□ 0.38
SNHG28-201ENST00000368102 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
SNHG28-201ENST00000368102 TNPO1Q92973 898 aaKnown RBP17.4■□□□□ 0.38
SNHG28-201ENST00000368102 ATP10DQ9P241 1426 aa17.4■□□□□ 0.38
SNHG28-201ENST00000368102 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
SNHG28-201ENST00000368102 DCTPP1Q9H773 170 aa17.4■□□□□ 0.38
SNHG28-201ENST00000368102 MAP3K5Q99683 1374 aa17.39■□□□□ 0.38
SNHG28-201ENST00000368102 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
SNHG28-201ENST00000368102 ORAI2Q96SN7 254 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms