RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
VTA1-201ENST00000367621 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
VTA1-201ENST00000367621 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
VTA1-201ENST00000367621 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
VTA1-201ENST00000367621 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.39
VTA1-201ENST00000367621 EIF4A2Q14240 407 aaKnown RBP12.61□□□□□ -0.39
VTA1-201ENST00000367621 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
VTA1-201ENST00000367621 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
VTA1-201ENST00000367621 NFAT5O94916 1531 aa12.61□□□□□ -0.39
VTA1-201ENST00000367621 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
VTA1-201ENST00000367621 ZNF521Q96K83 1311 aa12.61□□□□□ -0.39
VTA1-201ENST00000367621 PEAK1Q9H792 1746 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 APAF1O14727 1248 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 GCP02774 474 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 PSEN1P49768 467 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 SLIT3O75094 1523 aa12.6□□□□□ -0.39
VTA1-201ENST00000367621 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
VTA1-201ENST00000367621 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
VTA1-201ENST00000367621 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
VTA1-201ENST00000367621 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
VTA1-201ENST00000367621 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
VTA1-201ENST00000367621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■□□□□ 10.8
VTA1-201ENST00000367621 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
VTA1-201ENST00000367621 FLT4P35916 1363 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 FCHSD2O94868 740 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 HOXC9P31274 260 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
VTA1-201ENST00000367621 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 SALL2Q9Y467 1007 aaPredicted RBP12.58□□□□□ -0.4
VTA1-201ENST00000367621 IQSEC2Q5JU85 1478 aa12.58□□□□□ -0.4
VTA1-201ENST00000367621 LMOD2Q6P5Q4 547 aa12.57□□□□□ -0.4
VTA1-201ENST00000367621 TCP11L2Q8N4U5 519 aa12.57□□□□□ -0.4
VTA1-201ENST00000367621 IP6K1Q92551 441 aa12.57□□□□□ -0.4
VTA1-201ENST00000367621 ALS2Q96Q42 1657 aa12.57□□□□□ -0.4
VTA1-201ENST00000367621 AMPHP49418 695 aa12.56□□□□□ -0.4
VTA1-201ENST00000367621 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
VTA1-201ENST00000367621 NGEFQ8N5V2 710 aa12.55□□□□□ -0.4
VTA1-201ENST00000367621 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
VTA1-201ENST00000367621 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
VTA1-201ENST00000367621 ARHGEF10O15013 1369 aa12.55□□□□□ -0.4
VTA1-201ENST00000367621 HMOX1P09601 288 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 PDE3BQ13370 1112 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
VTA1-201ENST00000367621 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
VTA1-201ENST00000367621 RRP7AQ9Y3A4 280 aaKnown RBP12.54□□□□□ -0.4
VTA1-201ENST00000367621 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
VTA1-201ENST00000367621 WWC1Q8IX03 1113 aa12.53□□□□□ -0.4
VTA1-201ENST00000367621 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
VTA1-201ENST00000367621 EYA1Q99502 592 aa12.53□□□□□ -0.4
VTA1-201ENST00000367621 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
VTA1-201ENST00000367621 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
VTA1-201ENST00000367621 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
VTA1-201ENST00000367621 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
VTA1-201ENST00000367621 KDRP35968 1356 aa12.52□□□□□ -0.41
VTA1-201ENST00000367621 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
VTA1-201ENST00000367621 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
VTA1-201ENST00000367621 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
VTA1-201ENST00000367621 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
VTA1-201ENST00000367621 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
VTA1-201ENST00000367621 SLFN5Q08AF3 891 aa12.5□□□□□ -0.41
VTA1-201ENST00000367621 CPDO75976 1380 aa12.5□□□□□ -0.41
VTA1-201ENST00000367621 AHDC1Q5TGY3 1603 aaPredicted RBP12.49□□□□□ -0.41
VTA1-201ENST00000367621 PHRF1Q9P1Y6 1649 aaKnown RBP12.49□□□□□ -0.41
VTA1-201ENST00000367621 EMP3P54852 163 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 NEUROD2Q15784 382 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 NBPF6Q5VWK0 638 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
VTA1-201ENST00000367621 NBPF4Q96M43 638 aa12.49□□□□□ -0.41
VTA1-201ENST00000367621 ZBTB7CA1YPR0 619 aa12.48□□□□□ -0.41
VTA1-201ENST00000367621 WDR63Q8IWG1 891 aa12.48□□□□□ -0.41
VTA1-201ENST00000367621 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
VTA1-201ENST00000367621 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
VTA1-201ENST00000367621 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 TOM1O60784 492 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 RIPK4P57078 832 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
VTA1-201ENST00000367621 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
VTA1-201ENST00000367621 CHRNA2Q15822 529 aa12.46□□□□□ -0.41
VTA1-201ENST00000367621 CERKQ8TCT0 537 aa12.46□□□□□ -0.41
VTA1-201ENST00000367621 ERBB3P21860 1342 aa12.45□□□□□ -0.42
VTA1-201ENST00000367621 E9PSI1 815 aa12.45□□□□□ -0.42
VTA1-201ENST00000367621 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
VTA1-201ENST00000367621 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
VTA1-201ENST00000367621 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
VTA1-201ENST00000367621 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
VTA1-201ENST00000367621 COL18A1P39060 1754 aa12.44□□□□□ -0.42
VTA1-201ENST00000367621 ABCC6O95255 1503 aa12.44□□□□□ -0.42
VTA1-201ENST00000367621 PIP4K2BP78356 416 aa12.44□□□□□ -0.42
VTA1-201ENST00000367621 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
VTA1-201ENST00000367621 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms