RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 PANK2Q9BZ23 570 aa17.27■□□□□ 0.36
PARP1-203ENST00000366794 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 GPATCH3Q96I76 525 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
PARP1-203ENST00000366794 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
PARP1-203ENST00000366794 EVA1CP58658 441 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
PARP1-203ENST00000366794 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
PARP1-203ENST00000366794 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
PARP1-203ENST00000366794 TRPM2O94759 1503 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 PI4KAP2A4QPH2 592 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 SDSP20132 328 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 SMC5Q8IY18 1101 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
PARP1-203ENST00000366794 PI4KAP1Q8N8J0 262 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 ERC2O15083 957 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 NPHP1O15259 732 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 PTCD1O75127 700 aaKnown RBP17.25■□□□□ 0.35
PARP1-203ENST00000366794 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
PARP1-203ENST00000366794 CROCC2H7BZ55 1655 aa17.25■□□□□ 0.35
PARP1-203ENST00000366794 PLEKHO1Q53GL0 409 aaPredicted RBP17.25■□□□□ 0.35
PARP1-203ENST00000366794 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
PARP1-203ENST00000366794 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
PARP1-203ENST00000366794 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
PARP1-203ENST00000366794 TSPOAP1O95153 1857 aa17.23■□□□□ 0.35
PARP1-203ENST00000366794 INSRP06213 1382 aa17.23■□□□□ 0.35
PARP1-203ENST00000366794 STK3Q13188 491 aa17.23■□□□□ 0.35
PARP1-203ENST00000366794 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
PARP1-203ENST00000366794 IL16Q14005 1332 aa17.23■□□□□ 0.35
PARP1-203ENST00000366794 RABEP1Q15276 862 aa17.22■□□□□ 0.35
PARP1-203ENST00000366794 BMP2KLQ5H9B9 411 aa17.22■□□□□ 0.35
PARP1-203ENST00000366794 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
PARP1-203ENST00000366794 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
PARP1-203ENST00000366794 FIBPO43427 364 aa17.22■□□□□ 0.35
PARP1-203ENST00000366794 FSD1Q9BTV5 496 aa17.22■□□□□ 0.35
PARP1-203ENST00000366794 MX1P20591 662 aa17.21■□□□□ 0.35
PARP1-203ENST00000366794 CHAMP1Q96JM3 812 aa17.21■□□□□ 0.35
PARP1-203ENST00000366794 KDM5AP29375 1690 aaKnown RBP17.21■□□□□ 0.34
PARP1-203ENST00000366794 AACSQ86V21 672 aa17.21■□□□□ 0.34
PARP1-203ENST00000366794 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.34
PARP1-203ENST00000366794 PPP1R42Q7Z4L9 355 aa17.2■□□□□ 0.34
PARP1-203ENST00000366794 TOMM22Q9NS69 142 aa17.2■□□□□ 0.34
PARP1-203ENST00000366794 IQGAP3Q86VI3 1631 aa17.2■□□□□ 0.34
PARP1-203ENST00000366794 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
PARP1-203ENST00000366794 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
PARP1-203ENST00000366794 TCEANC2Q96MN5 208 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 PA2G4Q9UQ80 394 aaKnown RBP17.19■□□□□ 0.34
PARP1-203ENST00000366794 SMC3Q9UQE7 1217 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 PRR36Q9H6K5 1346 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 NUCB2P80303 420 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 PLEKHM2Q8IWE5 1019 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
PARP1-203ENST00000366794 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
PARP1-203ENST00000366794 TTC22Q5TAA0 569 aa17.18■□□□□ 0.34
PARP1-203ENST00000366794 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
PARP1-203ENST00000366794 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
PARP1-203ENST00000366794 E9PCH4 1651 aa17.18■□□□□ 0.34
PARP1-203ENST00000366794 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
PARP1-203ENST00000366794 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
PARP1-203ENST00000366794 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
PARP1-203ENST00000366794 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
PARP1-203ENST00000366794 HSPA2P54652 639 aa17.17■□□□□ 0.34
PARP1-203ENST00000366794 ANKRD44Q8N8A2 993 aa17.17■□□□□ 0.34
PARP1-203ENST00000366794 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
PARP1-203ENST00000366794 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
PARP1-203ENST00000366794 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
PARP1-203ENST00000366794 GRPEL1Q9HAV7 217 aa17.16■□□□□ 0.34
PARP1-203ENST00000366794 KCNQ3O43525 872 aa17.16■□□□□ 0.34
PARP1-203ENST00000366794 CWF19L2Q2TBE0 894 aaKnown RBP17.16■□□□□ 0.34
PARP1-203ENST00000366794 MSH6P52701 1360 aa17.16■□□□□ 0.34
PARP1-203ENST00000366794 TOM1L2Q6ZVM7 507 aa17.15■□□□□ 0.34
PARP1-203ENST00000366794 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
PARP1-203ENST00000366794 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
PARP1-203ENST00000366794 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.34
PARP1-203ENST00000366794 PDE1AP54750 535 aa17.14■□□□□ 0.34
PARP1-203ENST00000366794 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.34
PARP1-203ENST00000366794 PUS7Q96PZ0 661 aaKnown RBP17.14■□□□□ 0.34
PARP1-203ENST00000366794 MRE11P49959 708 aa17.14■□□□□ 0.33
PARP1-203ENST00000366794 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
PARP1-203ENST00000366794 CPA1P15085 419 aa17.14■□□□□ 0.33
PARP1-203ENST00000366794 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
PARP1-203ENST00000366794 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
PARP1-203ENST00000366794 UNC13BO14795 1591 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
PARP1-203ENST00000366794 MYD88Q99836 296 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 DCTPP1Q9H773 170 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 PRDM11Q9NQV5 511 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
PARP1-203ENST00000366794 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 SYNMO15061 1565 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 H3BQV1 296 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 APPP05067 770 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
PARP1-203ENST00000366794 PRPF40BQ6NWY9 871 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms