RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 PLEKHF1Q96S99 279 aa11.4□□□□□ -0.59
CALD1-202ENST00000361901 KAT6BQ8WYB5 2073 aa11.4□□□□□ -0.59
CALD1-202ENST00000361901 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 PIP4K2BP78356 416 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 ZC3H13Q5T200 1668 aaKnown RBP11.39□□□□□ -0.59
CALD1-202ENST00000361901 HDGFL1Q5TGJ6 251 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 ADAMTS13Q76LX8 1427 aa11.39□□□□□ -0.59
CALD1-202ENST00000361901 ANXA1P04083 346 aa11.38□□□□□ -0.59
CALD1-202ENST00000361901 RRAGDQ9NQL2 400 aaPredicted RBP11.38□□□□□ -0.59
CALD1-202ENST00000361901 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
CALD1-202ENST00000361901 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
CALD1-202ENST00000361901 PDCL3Q9H2J4 239 aa11.38□□□□□ -0.59
CALD1-202ENST00000361901 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
CALD1-202ENST00000361901 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
CALD1-202ENST00000361901 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
CALD1-202ENST00000361901 FLT4P35916 1363 aa11.37□□□□□ -0.59
CALD1-202ENST00000361901 FAM135BQ49AJ0 1406 aa11.37□□□□□ -0.59
CALD1-202ENST00000361901 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
CALD1-202ENST00000361901 SLKQ9H2G2 1235 aaPredicted RBP11.37□□□□□ -0.59
CALD1-202ENST00000361901 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
CALD1-202ENST00000361901 KIAA1210Q9ULL0 1709 aa11.36□□□□□ -0.59
CALD1-202ENST00000361901 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
CALD1-202ENST00000361901 TATP17735 454 aaPredicted RBP11.36□□□□□ -0.59
CALD1-202ENST00000361901 VAMP4O75379 141 aa11.36□□□□□ -0.59
CALD1-202ENST00000361901 CT47B1P0C2W7 299 aaPredicted RBP11.36□□□□□ -0.59
CALD1-202ENST00000361901 PTPRUQ92729 1446 aa11.36□□□□□ -0.59
CALD1-202ENST00000361901 NBPF6Q5VWK0 638 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 PLCD3Q8N3E9 789 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 NBPF4Q96M43 638 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 USP6P35125 1406 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 CCDC30Q5VVM6 783 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 KIF13AQ9H1H9 1805 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 NPHP4O75161 1426 aaPredicted RBP11.35□□□□□ -0.59
CALD1-202ENST00000361901 CHMP3Q9Y3E7 222 aa11.35□□□□□ -0.59
CALD1-202ENST00000361901 ATP7BP35670 1465 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 MYL6BP14649 208 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 BECN1Q14457 450 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 TAF7Q15545 349 aaPredicted RBP11.34□□□□□ -0.59
CALD1-202ENST00000361901 TPM2P07951 284 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
CALD1-202ENST00000361901 TRMT2AQ8IZ69 625 aaKnown RBP11.34□□□□□ -0.59
CALD1-202ENST00000361901 PRDM10Q9NQV6 1147 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 MSH6P52701 1360 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 TMEM94Q12767 1356 aa11.34□□□□□ -0.59
CALD1-202ENST00000361901 MSNP26038 577 aaKnown RBP11.33□□□□□ -0.59
CALD1-202ENST00000361901 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.59
CALD1-202ENST00000361901 IL16Q14005 1332 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 ADAMTS2O95450 1211 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
CALD1-202ENST00000361901 HMMRO75330 724 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 LGR6Q9HBX8 967 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 SLC39A6Q13433 755 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 IP6K1Q92551 441 aa11.33□□□□□ -0.6
CALD1-202ENST00000361901 ALDH1L2Q3SY69 923 aa11.32□□□□□ -0.6
CALD1-202ENST00000361901 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
CALD1-202ENST00000361901 PTCD1O75127 700 aaKnown RBP11.32□□□□□ -0.6
CALD1-202ENST00000361901 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
CALD1-202ENST00000361901 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
CALD1-202ENST00000361901 PIP4K2AP48426 406 aaPredicted RBP11.31□□□□□ -0.6
CALD1-202ENST00000361901 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
CALD1-202ENST00000361901 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
CALD1-202ENST00000361901 CPS1P31327 1500 aa11.31□□□□□ -0.6
CALD1-202ENST00000361901 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
CALD1-202ENST00000361901 ZNF335Q9H4Z2 1342 aaPredicted RBP11.3□□□□□ -0.6
CALD1-202ENST00000361901 CABP4P57796 275 aa11.3□□□□□ -0.6
CALD1-202ENST00000361901 G2E3Q7L622 706 aa11.3□□□□□ -0.6
CALD1-202ENST00000361901 RIC3Q7Z5B4 369 aa11.3□□□□□ -0.6
CALD1-202ENST00000361901 INSRP06213 1382 aa11.3□□□□□ -0.6
CALD1-202ENST00000361901 NEURL4Q96JN8 1562 aa11.29□□□□□ -0.6
CALD1-202ENST00000361901 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
CALD1-202ENST00000361901 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
CALD1-202ENST00000361901 RILPL2Q969X0 211 aa11.29□□□□□ -0.6
CALD1-202ENST00000361901 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
CALD1-202ENST00000361901 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
CALD1-202ENST00000361901 RIMS1Q86UR5 1692 aaKnown RBP11.29□□□□□ -0.6
CALD1-202ENST00000361901 CASC1Q6TDU7 716 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 CD163L1Q9NR16 1453 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 FLIIQ13045 1269 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 KIAA1211Q6ZU35 1233 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 EXOC6BQ9Y2D4 811 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 CLCN1P35523 988 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 MAP7D2Q96T17 732 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 MEIS3Q99687 375 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
CALD1-202ENST00000361901 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 IL17REQ8NFR9 667 aa11.28□□□□□ -0.6
CALD1-202ENST00000361901 CHL1O00533 1208 aa11.27□□□□□ -0.61
CALD1-202ENST00000361901 KCNQ3O43525 872 aa11.27□□□□□ -0.61
CALD1-202ENST00000361901 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
CALD1-202ENST00000361901 MYOM1P52179 1685 aa11.27□□□□□ -0.61
CALD1-202ENST00000361901 ESPNB1AK53 854 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
CALD1-202ENST00000361901 NEXNQ0ZGT2 675 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 NFATC2IPQ8NCF5 419 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms