RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 FCHSD2O94868 740 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 SF3B2Q13435 895 aaKnown RBP14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 ZSCAN25Q6NSZ9 544 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 MPHOSPH8Q99549 860 aa14.42□□□□□ -0.1
CCDC144A-204ENST00000360524 ATP2B2Q01814 1243 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 SKAP1Q86WV1 359 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 ZHX1Q9UKY1 873 aaPredicted RBP14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 KIAA0586Q9BVV6 1533 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 ANKRD1Q15327 319 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 EPRSP07814 1512 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 CGNQ9P2M7 1197 aaKnown RBP14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
CCDC144A-204ENST00000360524 FAM193AP78312 1265 aa14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 LARP1BQ659C4 914 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 CCAR1Q8IX12 1150 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
CCDC144A-204ENST00000360524 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 AACSQ86V21 672 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 PPFIBP1Q86W92 1011 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 TANGO6Q9C0B7 1094 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 PDRG1Q9NUG6 133 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 CCDC141Q6ZP82 1450 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 MCM4P33991 863 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 MYO6Q9UM54 1294 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 NFE2L2Q16236 605 aa14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
CCDC144A-204ENST00000360524 EIF3JO75822 258 aaKnown RBP14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 CAMK4Q16566 473 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 TRIM22Q8IYM9 498 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 SPATA32Q96LK8 384 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 IL1RAPL2Q9NP60 686 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 GNAT3A8MTJ3 354 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 SRGAP3O43295 1099 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 SYCP1Q15431 976 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 JMYQ8N9B5 988 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 PIBF1Q8WXW3 757 aa14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
CCDC144A-204ENST00000360524 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 GIMAP7Q8NHV1 300 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 CENPHQ9H3R5 247 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 IQGAP2Q13576 1575 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 KRT85P78386 507 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 ZNHIT6Q9NWK9 470 aaKnown RBP14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 CCDC181Q5TID7 509 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 NUTM1Q86Y26 1132 aa14.37□□□□□ -0.11
CCDC144A-204ENST00000360524 MAGI1Q96QZ7 1491 aaPredicted RBP14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 ERLIN1O75477 346 aa14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 PIP4K2AP48426 406 aaPredicted RBP14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 SYCE3A1L190 88 aa14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 ZC3H6P61129 1189 aaKnown RBP14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 CEP126Q9P2H0 1117 aa14.36□□□□□ -0.11
CCDC144A-204ENST00000360524 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 TMPOP42166 694 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 TRERF1Q96PN7 1200 aa14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 KRI1Q8N9T8 703 aaKnown RBP14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 DDX11Q96FC9 970 aa14.35□□□□□ -0.11
CCDC144A-204ENST00000360524 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 GOLGA6L7A0A1B0GV03 622 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 NEFHP12036 1026 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 WWC2Q6AWC2 1192 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 RPAP2Q8IXW5 612 aaPredicted RBP14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 MIS18AQ9NYP9 233 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 NUP62CLQ9H1M0 184 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 SOGA3Q5TF21 947 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
CCDC144A-204ENST00000360524 ANKRD62A6NC57 917 aa14.33□□□□□ -0.11
CCDC144A-204ENST00000360524 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.11
CCDC144A-204ENST00000360524 GOLGA6L10A6NI86 522 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 TMEM57Q8N5G2 664 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 STARD3NLO95772 234 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 IGHMBP2P38935 993 aaKnown RBP14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 BLOC1S2Q6QNY1 142 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 KIF14Q15058 1648 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 NAIPQ13075 1403 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 GPATCH11Q8N954 259 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
CCDC144A-204ENST00000360524 TDO2P48775 406 aa14.32□□□□□ -0.12
CCDC144A-204ENST00000360524 RAI14Q9P0K7 980 aa14.32□□□□□ -0.12
CCDC144A-204ENST00000360524 CDKL5O76039 1030 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms