RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FSTL1Q12841 308 aa8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 ABTB2Q8N961 1025 aa8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 EDC4Q6P2E9 1401 aaKnown RBP8.93□□□□□ -0.98
CDC42SE2-201ENST00000360515 N4BP2Q86UW6 1770 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE2-201ENST00000360515 A0A0G2JS52 829 aa8.92□□□□□ -0.98
CDC42SE2-201ENST00000360515 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
CDC42SE2-201ENST00000360515 MYT1Q01538 1121 aa8.92□□□□□ -0.98
CDC42SE2-201ENST00000360515 POLD1P28340 1107 aa8.92□□□□□ -0.98
CDC42SE2-201ENST00000360515 EXOC5O00471 708 aa8.91□□□□□ -0.98
CDC42SE2-201ENST00000360515 MAP3K19Q56UN5 1328 aa8.91□□□□□ -0.98
CDC42SE2-201ENST00000360515 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
CDC42SE2-201ENST00000360515 ATF5Q9Y2D1 282 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE2-201ENST00000360515 TRAK1Q9UPV9 953 aa8.9□□□□□ -0.98
CDC42SE2-201ENST00000360515 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.99
CDC42SE2-201ENST00000360515 TJP1Q07157 1748 aa8.89□□□□□ -0.99
CDC42SE2-201ENST00000360515 IL2RBP14784 551 aa8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 RGL3Q3MIN7 710 aa8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 CENPJQ9HC77 1338 aaPredicted RBP8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 NLGN2Q8NFZ4 835 aa8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 KLRG1Q96E93 195 aa8.88□□□□□ -0.99
CDC42SE2-201ENST00000360515 TOMM70O94826 608 aa8.87□□□□□ -0.99
CDC42SE2-201ENST00000360515 MEGF6O75095 1541 aa8.87□□□□□ -0.99
CDC42SE2-201ENST00000360515 KDRP35968 1356 aa8.87□□□□□ -0.99
CDC42SE2-201ENST00000360515 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
CDC42SE2-201ENST00000360515 FER1L6Q2WGJ9 1857 aa8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 GPR162Q16538 588 aa8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 RAB3GAP2Q9H2M9 1393 aa8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 NKX1-1Q15270 411 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 SCN4AP35499 1836 aa8.86□□□□□ -0.99
CDC42SE2-201ENST00000360515 UBR2Q8IWV8 1755 aa8.85□□□□□ -0.99
CDC42SE2-201ENST00000360515 HIRIP3Q9BW71 556 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 TGFB2P61812 414 aa8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 AFDNP55196 1824 aaKnown RBP8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 GPBP1L1Q9HC44 474 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 EVC2Q86UK5 1308 aa8.84□□□□□ -0.99
CDC42SE2-201ENST00000360515 IP6K1Q92551 441 aa8.83□□□□□ -1
CDC42SE2-201ENST00000360515 SSFA2P28290 1259 aa8.83□□□□□ -1
CDC42SE2-201ENST00000360515 INSRP06213 1382 aa8.83□□□□□ -1
CDC42SE2-201ENST00000360515 TONSLQ96HA7 1378 aa8.83□□□□□ -1
CDC42SE2-201ENST00000360515 RGS19P49795 217 aa8.82□□□□□ -1
CDC42SE2-201ENST00000360515 NLRP6P59044 892 aa8.82□□□□□ -1
CDC42SE2-201ENST00000360515 SCN11AQ9UI33 1791 aa8.82□□□□□ -1
CDC42SE2-201ENST00000360515 SCN7AQ01118 1682 aa8.81□□□□□ -1
CDC42SE2-201ENST00000360515 BCORQ6W2J9 1755 aa8.8□□□□□ -1
CDC42SE2-201ENST00000360515 KTN1Q86UP2 1357 aaKnown RBP8.8□□□□□ -1
CDC42SE2-201ENST00000360515 SAFB2Q14151 953 aaKnown RBP eCLIP8.8□□□□□ -1
CDC42SE2-201ENST00000360515 CABP1Q9NZU7 370 aa8.8□□□□□ -1
CDC42SE2-201ENST00000360515 MRC1P22897 1456 aa8.8□□□□□ -1
CDC42SE2-201ENST00000360515 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CDC42SE2-201ENST00000360515 LAMB1P07942 1786 aa8.8□□□□□ -1
CDC42SE2-201ENST00000360515 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
CDC42SE2-201ENST00000360515 PRDM10Q9NQV6 1147 aa8.79□□□□□ -1
CDC42SE2-201ENST00000360515 KDM2AQ9Y2K7 1162 aa8.79□□□□□ -1
CDC42SE2-201ENST00000360515 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
CDC42SE2-201ENST00000360515 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
CDC42SE2-201ENST00000360515 CCDC88AQ3V6T2 1871 aa8.78□□□□□ -1
CDC42SE2-201ENST00000360515 ANKRD31Q8N7Z5 1873 aa8.78□□□□□ -1
CDC42SE2-201ENST00000360515 MYH14Q7Z406 1995 aaKnown RBP8.78□□□□□ -1
CDC42SE2-201ENST00000360515 DCAF5Q96JK2 942 aa8.78□□□□□ -1
CDC42SE2-201ENST00000360515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -12e-9■□□□□ 9.4
CDC42SE2-201ENST00000360515 ADRA2BP18089 450 aa8.78□□□□□ -1
CDC42SE2-201ENST00000360515 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
CDC42SE2-201ENST00000360515 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
CDC42SE2-201ENST00000360515 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1
CDC42SE2-201ENST00000360515 SMARCC1Q92922 1105 aaPredicted RBP8.77□□□□□ -1
CDC42SE2-201ENST00000360515 A0A1W2PP64 1363 aa8.77□□□□□ -1.01
CDC42SE2-201ENST00000360515 ITGAEP38570 1179 aa8.77□□□□□ -1.01
CDC42SE2-201ENST00000360515 NUTM2GQ5VZR2 741 aa8.77□□□□□ -1.01
CDC42SE2-201ENST00000360515 LTBP1Q14766 1721 aa8.77□□□□□ -1.01
CDC42SE2-201ENST00000360515 USP47Q96K76 1375 aa8.77□□□□□ -1.01
CDC42SE2-201ENST00000360515 PALLDQ8WX93 1383 aa8.76□□□□□ -1.01
CDC42SE2-201ENST00000360515 CNTNAP4Q9C0A0 1308 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 KCNA3P22001 575 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 COL13A1Q5TAT6 717 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 COL11A2P13942 1736 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 TFCP2L1Q9NZI6 479 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 PCDH11XQ9BZA7 1347 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 PCDH11YQ9BZA8 1340 aa8.75□□□□□ -1.01
CDC42SE2-201ENST00000360515 CCNL1Q9UK58 526 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-201ENST00000360515 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
CDC42SE2-201ENST00000360515 KCPQ6ZWJ8 1503 aa8.74□□□□□ -1.01
CDC42SE2-201ENST00000360515 NBPF1Q3BBV0 1214 aa8.73□□□□□ -1.01
CDC42SE2-201ENST00000360515 ZCRB1Q8TBF4 217 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-201ENST00000360515 TRPM7Q96QT4 1865 aa8.73□□□□□ -1.01
CDC42SE2-201ENST00000360515 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
CDC42SE2-201ENST00000360515 SMC1BQ8NDV3 1235 aa8.73□□□□□ -1.01
CDC42SE2-201ENST00000360515 HOXC9P31274 260 aa8.72□□□□□ -1.01
CDC42SE2-201ENST00000360515 SRPK2P78362 688 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-201ENST00000360515 RBBP6Q7Z6E9 1792 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-201ENST00000360515 KDM2BQ8NHM5 1336 aa8.72□□□□□ -1.01
CDC42SE2-201ENST00000360515 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.01
CDC42SE2-201ENST00000360515 ACSBG1Q96GR2 724 aa8.71□□□□□ -1.02
CDC42SE2-201ENST00000360515 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
CDC42SE2-201ENST00000360515 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
CDC42SE2-201ENST00000360515 AMIGO3Q86WK7 504 aa8.69□□□□□ -1.02
CDC42SE2-201ENST00000360515 CNTNAP1P78357 1384 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms