RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 GPT2Q8TD30 523 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 OFD1O75665 1012 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 SLC52A1Q9NWF4 448 aa13.42□□□□□ -0.26
RPE-202ENST00000359429 PRPF40AO75400 957 aaKnown RBP13.41□□□□□ -0.26
RPE-202ENST00000359429 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
RPE-202ENST00000359429 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
RPE-202ENST00000359429 NME9Q86XW9 330 aa13.41□□□□□ -0.26
RPE-202ENST00000359429 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
RPE-202ENST00000359429 NSFL1CQ9UNZ2 370 aaKnown RBP13.41□□□□□ -0.26
RPE-202ENST00000359429 ATP10DQ9P241 1426 aa13.41□□□□□ -0.26
RPE-202ENST00000359429 YEATS2Q9ULM3 1422 aa13.41□□□□□ -0.26
RPE-202ENST00000359429 INTS3Q68E01 1043 aaKnown RBP13.4□□□□□ -0.26
RPE-202ENST00000359429 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
RPE-202ENST00000359429 MSNP26038 577 aaKnown RBP13.4□□□□□ -0.26
RPE-202ENST00000359429 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
RPE-202ENST00000359429 CEP85Q6P2H3 762 aa13.4□□□□□ -0.26
RPE-202ENST00000359429 PKNOX2Q96KN3 472 aa13.4□□□□□ -0.26
RPE-202ENST00000359429 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
RPE-202ENST00000359429 FBXO31Q5XUX0 539 aaPredicted RBP13.39□□□□□ -0.27
RPE-202ENST00000359429 PDLIM2Q96JY6 352 aa13.39□□□□□ -0.27
RPE-202ENST00000359429 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
RPE-202ENST00000359429 RGS12O14924 1447 aa13.38□□□□□ -0.27
RPE-202ENST00000359429 FOXD4L5Q5VV16 416 aaPredicted RBP13.38□□□□□ -0.27
RPE-202ENST00000359429 FOXD4L4Q8WXT5 416 aaPredicted RBP13.38□□□□□ -0.27
RPE-202ENST00000359429 KIF20BQ96Q89 1820 aa13.38□□□□□ -0.27
RPE-202ENST00000359429 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
RPE-202ENST00000359429 MEIS3Q99687 375 aa13.38□□□□□ -0.27
RPE-202ENST00000359429 MYO5BQ9ULV0 1848 aa13.38□□□□□ -0.27
RPE-202ENST00000359429 CWC22Q9HCG8 908 aaKnown RBP13.37□□□□□ -0.27
RPE-202ENST00000359429 NOL7Q9UMY1 257 aaKnown RBP13.37□□□□□ -0.27
RPE-202ENST00000359429 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
RPE-202ENST00000359429 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
RPE-202ENST00000359429 KCNA4P22459 653 aa13.37□□□□□ -0.27
RPE-202ENST00000359429 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
RPE-202ENST00000359429 TMEM131LA2VDJ0 1609 aa13.37□□□□□ -0.27
RPE-202ENST00000359429 ST18O60284 1047 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 RBM10P98175 930 aaKnown RBP13.36□□□□□ -0.27
RPE-202ENST00000359429 RTL1A6NKG5 1358 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 MSH6P52701 1360 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 AEBP1Q8IUX7 1158 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 RPAP2Q8IXW5 612 aaPredicted RBP13.36□□□□□ -0.27
RPE-202ENST00000359429 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
RPE-202ENST00000359429 R3HCC1Q9Y3T6 440 aaKnown RBP13.36□□□□□ -0.27
RPE-202ENST00000359429 SYCE3A1L190 88 aa13.35□□□□□ -0.27
RPE-202ENST00000359429 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.35□□□□□ -0.27
RPE-202ENST00000359429 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
RPE-202ENST00000359429 LMOD3Q0VAK6 560 aa13.35□□□□□ -0.27
RPE-202ENST00000359429 HS1BP3Q53T59 392 aa13.35□□□□□ -0.27
RPE-202ENST00000359429 DIP2CQ9Y2E4 1556 aa13.34□□□□□ -0.27
RPE-202ENST00000359429 ZNF500O60304 480 aaPredicted RBP13.34□□□□□ -0.27
RPE-202ENST00000359429 TSHZ3Q63HK5 1081 aa13.34□□□□□ -0.27
RPE-202ENST00000359429 ATP7BP35670 1465 aa13.34□□□□□ -0.27
RPE-202ENST00000359429 CDK12Q9NYV4 1490 aaPredicted RBP13.34□□□□□ -0.27
RPE-202ENST00000359429 LRSAM1Q6UWE0 723 aa13.33□□□□□ -0.27
RPE-202ENST00000359429 MCM10Q7L590 875 aa13.33□□□□□ -0.27
RPE-202ENST00000359429 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
RPE-202ENST00000359429 ERC2O15083 957 aa13.33□□□□□ -0.28
RPE-202ENST00000359429 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
RPE-202ENST00000359429 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
RPE-202ENST00000359429 REC8O95072 547 aa13.32□□□□□ -0.28
RPE-202ENST00000359429 NEK4P51957 841 aa13.32□□□□□ -0.28
RPE-202ENST00000359429 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
RPE-202ENST00000359429 ZKSCAN5Q9Y2L8 839 aa13.32□□□□□ -0.28
RPE-202ENST00000359429 DLG5Q8TDM6 1919 aa13.32□□□□□ -0.28
RPE-202ENST00000359429 AATKQ6ZMQ8 1374 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 CHL1O00533 1208 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 PDE1AP54750 535 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 EDC4Q6P2E9 1401 aaKnown RBP13.31□□□□□ -0.28
RPE-202ENST00000359429 TERF1P54274 439 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 COG3Q96JB2 828 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 CPS1P31327 1500 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 NEO1Q92859 1461 aa13.31□□□□□ -0.28
RPE-202ENST00000359429 F6X3S4 739 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 G2E3Q7L622 706 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 FAM13BQ9NYF5 915 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 WASLO00401 505 aaPredicted RBP13.3□□□□□ -0.28
RPE-202ENST00000359429 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
RPE-202ENST00000359429 DIP2BQ9P265 1576 aa13.3□□□□□ -0.28
RPE-202ENST00000359429 BRD1O95696 1058 aa13.29□□□□□ -0.28
RPE-202ENST00000359429 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
RPE-202ENST00000359429 PREX1Q8TCU6 1659 aa13.29□□□□□ -0.28
RPE-202ENST00000359429 EIF4A2Q14240 407 aaKnown RBP13.29□□□□□ -0.28
RPE-202ENST00000359429 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
RPE-202ENST00000359429 EXOC6BQ9Y2D4 811 aa13.29□□□□□ -0.28
RPE-202ENST00000359429 UQCRHLA0A096LP55 91 aa13.28□□□□□ -0.28
RPE-202ENST00000359429 UQCRHP07919 91 aa13.28□□□□□ -0.28
RPE-202ENST00000359429 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
RPE-202ENST00000359429 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
RPE-202ENST00000359429 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
RPE-202ENST00000359429 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPE-202ENST00000359429 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
RPE-202ENST00000359429 PTPRCP08575 1304 aa13.28□□□□□ -0.28
RPE-202ENST00000359429 FAM69CQ0P6D2 419 aa13.27□□□□□ -0.28
RPE-202ENST00000359429 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms