RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ROBO2Q9HCK4 1378 aa13.73□□□□□ -0.21
SSU72-202ENST00000359060 PTPRMP28827 1452 aa13.72□□□□□ -0.21
SSU72-202ENST00000359060 NLRP2Q9NX02 1062 aa13.72□□□□□ -0.21
SSU72-202ENST00000359060 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
SSU72-202ENST00000359060 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
SSU72-202ENST00000359060 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
SSU72-202ENST00000359060 FLIIQ13045 1269 aa13.72□□□□□ -0.21
SSU72-202ENST00000359060 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
SSU72-202ENST00000359060 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
SSU72-202ENST00000359060 K7ELQ4 463 aaPredicted RBP13.71□□□□□ -0.21
SSU72-202ENST00000359060 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.21
SSU72-202ENST00000359060 TTC21AQ8NDW8 1320 aa13.71□□□□□ -0.21
SSU72-202ENST00000359060 PPLO60437 1756 aa13.71□□□□□ -0.21
SSU72-202ENST00000359060 G2E3Q7L622 706 aa13.71□□□□□ -0.21
SSU72-202ENST00000359060 LRRCC1Q9C099 1032 aa13.71□□□□□ -0.21
SSU72-202ENST00000359060 PTPRCP08575 1304 aa13.71□□□□□ -0.22
SSU72-202ENST00000359060 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 ATP7BP35670 1465 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 PLEKHO1Q53GL0 409 aaPredicted RBP13.7□□□□□ -0.22
SSU72-202ENST00000359060 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 CHL1O00533 1208 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 NEK4P51957 841 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
SSU72-202ENST00000359060 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
SSU72-202ENST00000359060 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
SSU72-202ENST00000359060 MAP4K4O95819 1239 aaPredicted RBP13.69□□□□□ -0.22
SSU72-202ENST00000359060 RABEP1Q15276 862 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 FLT4P35916 1363 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 ANXA1P04083 346 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 CHMP3Q9Y3E7 222 aa13.69□□□□□ -0.22
SSU72-202ENST00000359060 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
SSU72-202ENST00000359060 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
SSU72-202ENST00000359060 LRRFIP2Q9Y608 721 aaKnown RBP13.68□□□□□ -0.22
SSU72-202ENST00000359060 USP19O94966 1318 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 ERC2O15083 957 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 MCTP1Q6DN14 999 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 SIRT1Q96EB6 747 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 DCTPP1Q9H773 170 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 SRGAP3O43295 1099 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 CEP85Q6P2H3 762 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 ARHGEF40Q8TER5 1519 aa13.68□□□□□ -0.22
SSU72-202ENST00000359060 BTBD11A6QL63 1104 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 PTMSP20962 102 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 ZC3H13Q5T200 1668 aaKnown RBP13.67□□□□□ -0.22
SSU72-202ENST00000359060 PLEKHM2Q8IWE5 1019 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
SSU72-202ENST00000359060 IQSEC2Q5JU85 1478 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 DIAPH3Q9NSV4 1193 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 SDSP20132 328 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 FGD1P98174 961 aa13.66□□□□□ -0.22
SSU72-202ENST00000359060 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
SSU72-202ENST00000359060 ZNF853P0CG23 659 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 ATF3P18847 181 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 ABCC4O15439 1325 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 MSH6P52701 1360 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 HOXC9P31274 260 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 SKOR2Q2VWA4 1001 aaPredicted RBP13.65□□□□□ -0.22
SSU72-202ENST00000359060 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
SSU72-202ENST00000359060 RIC3Q7Z5B4 369 aa13.65□□□□□ -0.22
SSU72-202ENST00000359060 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
SSU72-202ENST00000359060 NUCB2P80303 420 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 NEXNQ0ZGT2 675 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 MX1P20591 662 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 PLCB2Q00722 1185 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 TTC5Q8N0Z6 440 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
SSU72-202ENST00000359060 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
SSU72-202ENST00000359060 DDX58O95786 925 aaKnown RBP13.64□□□□□ -0.23
SSU72-202ENST00000359060 PTMAP06454 111 aaKnown RBP13.64□□□□□ -0.23
SSU72-202ENST00000359060 NAP1L2Q9ULW6 460 aaPredicted RBP13.64□□□□□ -0.23
SSU72-202ENST00000359060 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
SSU72-202ENST00000359060 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
SSU72-202ENST00000359060 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
SSU72-202ENST00000359060 TAOK2Q9UL54 1235 aa13.63□□□□□ -0.23
SSU72-202ENST00000359060 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
SSU72-202ENST00000359060 PREX1Q8TCU6 1659 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 SSFA2P28290 1259 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 G3BP1Q13283 466 aaKnown RBP eCLIP13.62□□□□□ -0.23
SSU72-202ENST00000359060 SBNO1A3KN83 1393 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 PI4KAP2A4QPH2 592 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 MYL6BP14649 208 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 PI4KAP1Q8N8J0 262 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 CLTCQ00610 1675 aaKnown RBP13.62□□□□□ -0.23
SSU72-202ENST00000359060 PIK3R4Q99570 1358 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 UPF3BQ9BZI7 483 aaKnown RBP13.62□□□□□ -0.23
SSU72-202ENST00000359060 CIZ1Q9ULV3 898 aaPredicted RBP13.62□□□□□ -0.23
SSU72-202ENST00000359060 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
SSU72-202ENST00000359060 PDE1AP54750 535 aa13.61□□□□□ -0.23
SSU72-202ENST00000359060 PHAXQ9H814 394 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms